RNA–Protein interactions for RNA: ENST00000388901.9

COPS2-202, Transcript of COP9 signalosome subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS2, Length 6,628 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-202ENST00000388901 NISCHQ9Y2I1 1504 aa7.51□□□□□ -1.21
COPS2-202ENST00000388901 DCAF8L2P0C7V8 631 aa7.23□□□□□ -1.25
COPS2-202ENST00000388901 FAM9AQ8IZU1 332 aaPredicted RBP6.91□□□□□ -1.3
COPS2-202ENST00000388901 SUPT5HO00267 1087 aaKnown RBP6.86□□□□□ -1.31
COPS2-202ENST00000388901 APLP2Q06481 763 aa6.79□□□□□ -1.32
COPS2-202ENST00000388901 PELP1Q8IZL8 1130 aaKnown RBP6.79□□□□□ -1.32
COPS2-202ENST00000388901 SHROOM4Q9ULL8 1493 aa6.7□□□□□ -1.34
COPS2-202ENST00000388901 ZEB1P37275 1124 aaPredicted RBP6.68□□□□□ -1.34
COPS2-202ENST00000388901 TRIM41Q8WV44 630 aa6.56□□□□□ -1.36
COPS2-202ENST00000388901 EHMT2Q96KQ7 1210 aa6.49□□□□□ -1.37
COPS2-202ENST00000388901 CCER1Q8TC90 406 aaPredicted RBP6.47□□□□□ -1.37
COPS2-202ENST00000388901 CENPBP07199 599 aaPredicted RBP6.46□□□□□ -1.38
COPS2-202ENST00000388901 UBTFP17480 764 aaKnown RBP6.42□□□□□ -1.38
COPS2-202ENST00000388901 TRIM26Q12899 539 aaPredicted RBP6.34□□□□□ -1.39
COPS2-202ENST00000388901 MYT1Q01538 1121 aa6.33□□□□□ -1.4
COPS2-202ENST00000388901 CCDC180Q9P1Z9 1646 aa6.33□□□□□ -1.4
COPS2-202ENST00000388901 PCGF6Q9BYE7 350 aa6.31□□□□□ -1.4
COPS2-202ENST00000388901 NEFLP07196 543 aa6.31□□□□□ -1.4
COPS2-202ENST00000388901 ATP1B4Q9UN42 357 aaPredicted RBP6.28□□□□□ -1.4
COPS2-202ENST00000388901 CHIC1Q5VXU3 224 aa6.27□□□□□ -1.41
COPS2-202ENST00000388901 ACIN1Q9UKV3 1341 aaKnown RBP6.26□□□□□ -1.41
COPS2-202ENST00000388901 RANGAP1P46060 587 aaPredicted RBP6.26□□□□□ -1.41
COPS2-202ENST00000388901 ZCCHC6Q5VYS8 1495 aaKnown RBP6.26□□□□□ -1.41
COPS2-202ENST00000388901 ABCC9O60706 1549 aa6.24□□□□□ -1.41
COPS2-202ENST00000388901 TTBK1Q5TCY1 1321 aaPredicted RBP6.24□□□□□ -1.41
COPS2-202ENST00000388901 ERICH6Q7L0X2 663 aa6.24□□□□□ -1.41
COPS2-202ENST00000388901 DCAF1Q9Y4B6 1507 aa6.18□□□□□ -1.42
COPS2-202ENST00000388901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.18□□□□□ -1.42
COPS2-202ENST00000388901 HNRNPUL2Q1KMD3 747 aaKnown RBP6.18□□□□□ -1.42
COPS2-202ENST00000388901 CDK11AQ9UQ88 783 aaPredicted RBP6.16□□□□□ -1.42
COPS2-202ENST00000388901 NACADO15069 1562 aa6.16□□□□□ -1.42
COPS2-202ENST00000388901 RB1CC1Q8TDY2 1594 aa6.16□□□□□ -1.42
COPS2-202ENST00000388901 EEA1Q15075 1411 aa6.15□□□□□ -1.42
COPS2-202ENST00000388901 HRCP23327 699 aa6.15□□□□□ -1.43
COPS2-202ENST00000388901 MYT1LQ9UL68 1186 aa6.13□□□□□ -1.43
COPS2-202ENST00000388901 CSRNP3Q8WYN3 585 aa6.12□□□□□ -1.43
COPS2-202ENST00000388901 YTHDC1Q96MU7 727 aaKnown RBP6.11□□□□□ -1.43
COPS2-202ENST00000388901 CLSPNQ9HAW4 1339 aa6.1□□□□□ -1.43
COPS2-202ENST00000388901 DAXXQ9UER7 740 aaPredicted RBP6.09□□□□□ -1.43
COPS2-202ENST00000388901 SCRIBQ14160 1630 aa6.09□□□□□ -1.44
COPS2-202ENST00000388901 PABPN1Q86U42 306 aaKnown RBP eCLIP6.08□□□□□ -1.44
COPS2-202ENST00000388901 MYO15BQ96JP2 1530 aa6.07□□□□□ -1.44
COPS2-202ENST00000388901 FAM50AQ14320 339 aaKnown RBP6.03□□□□□ -1.44
COPS2-202ENST00000388901 TRIM52Q96A61 297 aa6.02□□□□□ -1.45
COPS2-202ENST00000388901 ITGAEP38570 1179 aa6.01□□□□□ -1.45
COPS2-202ENST00000388901 RSF1Q96T23 1441 aaPredicted RBP6□□□□□ -1.45
COPS2-202ENST00000388901 LOC105371045A0A1W2PR82 267 aa6□□□□□ -1.45
COPS2-202ENST00000388901 NEFMP07197 916 aa6□□□□□ -1.45
COPS2-202ENST00000388901 ANP32CO43423 234 aa5.99□□□□□ -1.45
COPS2-202ENST00000388901 NPM1P06748 294 aaKnown RBP eCLIP5.99□□□□□ -1.45
COPS2-202ENST00000388901 BAZ1AQ9NRL2 1556 aaPredicted RBP5.98□□□□□ -1.45
COPS2-202ENST00000388901 DIEXFQ68CQ4 756 aaKnown RBP5.97□□□□□ -1.45
COPS2-202ENST00000388901 ZBTB47Q9UFB7 747 aaPredicted RBP5.95□□□□□ -1.46
COPS2-202ENST00000388901 ZNF316A6NFI3 1004 aaPredicted RBP5.95□□□□□ -1.46
COPS2-202ENST00000388901 GOLGA3Q08378 1498 aa5.95□□□□□ -1.46
COPS2-202ENST00000388901 BAZ1BQ9UIG0 1483 aaKnown RBP5.95□□□□□ -1.46
COPS2-202ENST00000388901 PPARGC1BQ86YN6 1023 aaKnown RBP5.94□□□□□ -1.46
COPS2-202ENST00000388901 SLC24A1O60721 1099 aa5.94□□□□□ -1.46
COPS2-202ENST00000388901 KIF27Q86VH2 1401 aa5.94□□□□□ -1.46
COPS2-202ENST00000388901 POLR3GLQ9BT43 218 aa5.94□□□□□ -1.46
COPS2-202ENST00000388901 ESF1Q9H501 851 aaKnown RBP5.94□□□□□ -1.46
COPS2-202ENST00000388901 FBLN2P98095 1184 aa5.93□□□□□ -1.46
COPS2-202ENST00000388901 CEP164Q9UPV0 1460 aa5.92□□□□□ -1.46
COPS2-202ENST00000388901 TONSLQ96HA7 1378 aa5.92□□□□□ -1.46
COPS2-202ENST00000388901 WRNQ14191 1432 aaPredicted RBP eCLIP5.92□□□□□ -1.46
COPS2-202ENST00000388901 RTL5Q5HYW3 569 aaPredicted RBP5.92□□□□□ -1.46
COPS2-202ENST00000388901 TSPY4P0CV99 314 aa5.91□□□□□ -1.46
COPS2-202ENST00000388901 TSPY10P0CW01 314 aa5.91□□□□□ -1.46
COPS2-202ENST00000388901 TNIKQ9UKE5 1360 aa5.91□□□□□ -1.46
COPS2-202ENST00000388901 CLIP1P30622 1438 aa5.91□□□□□ -1.46
COPS2-202ENST00000388901 EIF5BO60841 1220 aaKnown RBP5.9□□□□□ -1.46
COPS2-202ENST00000388901 SMARCA2P51531 1590 aa5.9□□□□□ -1.47
COPS2-202ENST00000388901 TIMELESSQ9UNS1 1208 aa5.9□□□□□ -1.47
COPS2-202ENST00000388901 SLC4A1APQ9BWU0 796 aaKnown RBP5.89□□□□□ -1.47
COPS2-202ENST00000388901 MTUS2Q5JR59 1369 aa5.89□□□□□ -1.47
COPS2-202ENST00000388901 FHAD1B1AJZ9 1412 aa5.89□□□□□ -1.47
COPS2-202ENST00000388901 CHMP7Q8WUX9 453 aaPredicted RBP5.88□□□□□ -1.47
COPS2-202ENST00000388901 CDCA8Q53HL2 280 aa5.88□□□□□ -1.47
COPS2-202ENST00000388901 NEUROD1Q13562 356 aa5.86□□□□□ -1.47
COPS2-202ENST00000388901 PLEKHD1A6NEE1 506 aa5.86□□□□□ -1.47
COPS2-202ENST00000388901 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.86□□□□□ -1.47
COPS2-202ENST00000388901 PDS5BQ9NTI5 1447 aa5.84□□□□□ -1.47
COPS2-202ENST00000388901 CANXP27824 592 aaKnown RBP5.83□□□□□ -1.48
COPS2-202ENST00000388901 ZNF777Q9ULD5 760 aaPredicted RBP5.83□□□□□ -1.48
COPS2-202ENST00000388901 STAG3Q9UJ98 1225 aa5.82□□□□□ -1.48
COPS2-202ENST00000388901 ABCC8Q09428 1581 aa5.82□□□□□ -1.48
COPS2-202ENST00000388901 CEP162Q5TB80 1403 aa5.81□□□□□ -1.48
COPS2-202ENST00000388901 ZNF326Q5BKZ1 582 aaKnown RBP5.81□□□□□ -1.48
COPS2-202ENST00000388901 CNGB1Q14028 1251 aaPredicted RBP5.8□□□□□ -1.48
COPS2-202ENST00000388901 CARMIL2Q6F5E8 1435 aa5.8□□□□□ -1.48
COPS2-202ENST00000388901 P3H3Q8IVL6 736 aa5.8□□□□□ -1.48
COPS2-202ENST00000388901 BCANQ96GW7 911 aa5.8□□□□□ -1.48
COPS2-202ENST00000388901 UPF2Q9HAU5 1272 aaKnown RBP5.79□□□□□ -1.48
COPS2-202ENST00000388901 HDGFP51858 240 aaKnown RBP5.79□□□□□ -1.48
COPS2-202ENST00000388901 CHMP4BQ9H444 224 aaKnown RBP5.79□□□□□ -1.48
COPS2-202ENST00000388901 ANP32AP39687 249 aaKnown RBP5.79□□□□□ -1.48
COPS2-202ENST00000388901 EIF4G2P78344 907 aaKnown RBP eCLIP5.78□□□□□ -1.48
COPS2-202ENST00000388901 RSPH4AQ5TD94 716 aa5.78□□□□□ -1.48
COPS2-202ENST00000388901 ERCC6Q03468 1493 aa5.78□□□□□ -1.48
COPS2-202ENST00000388901 FMN1Q68DA7 1419 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms