RNA–Protein interactions for RNA: ENST00000318809.11

LTBP4-204, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 1,700 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-204ENST00000318809 NISCHQ9Y2I1 1504 aa41.23■■■■■ 4.19
LTBP4-204ENST00000318809 CCDC180Q9P1Z9 1646 aa36.26■■■■□ 3.39
LTBP4-204ENST00000318809 ABCC9O60706 1549 aa34.91■■■■□ 3.18
LTBP4-204ENST00000318809 ZCCHC6Q5VYS8 1495 aaKnown RBP34.5■■■■□ 3.11
LTBP4-204ENST00000318809 DCAF8L2P0C7V8 631 aa34.22■■■■□ 3.07
LTBP4-204ENST00000318809 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
LTBP4-204ENST00000318809 MYO15BQ96JP2 1530 aa33.94■■■■□ 3.02
LTBP4-204ENST00000318809 NACADO15069 1562 aa33.93■■■■□ 3.02
LTBP4-204ENST00000318809 RB1CC1Q8TDY2 1594 aa33.79■■■■□ 3
LTBP4-204ENST00000318809 SCRIBQ14160 1630 aa33.24■■■□□ 2.91
LTBP4-204ENST00000318809 SHROOM4Q9ULL8 1493 aa33.12■■■□□ 2.89
LTBP4-204ENST00000318809 UNC13AQ9UPW8 1703 aa33.1■■■□□ 2.89
LTBP4-204ENST00000318809 BICRAQ9NZM4 1560 aa32.84■■■□□ 2.85
LTBP4-204ENST00000318809 PABPN1Q86U42 306 aaKnown RBP eCLIP32.8■■■□□ 2.84
LTBP4-204ENST00000318809 CECR2Q9BXF3 1484 aa32.11■■■□□ 2.73
LTBP4-204ENST00000318809 EIF4G1Q04637 1599 aaKnown RBP31.88■■■□□ 2.69
LTBP4-204ENST00000318809 BAZ1AQ9NRL2 1556 aaPredicted RBP31.87■■■□□ 2.69
LTBP4-204ENST00000318809 MROH2BQ7Z745 1585 aa31.83■■■□□ 2.69
LTBP4-204ENST00000318809 SMARCA4P51532 1647 aa31.83■■■□□ 2.69
LTBP4-204ENST00000318809 RSF1Q96T23 1441 aaPredicted RBP31.72■■■□□ 2.67
LTBP4-204ENST00000318809 CC2D2AQ9P2K1 1620 aa31.58■■■□□ 2.65
LTBP4-204ENST00000318809 WIZO95785 1651 aa31.52■■■□□ 2.64
LTBP4-204ENST00000318809 SUPT5HO00267 1087 aaKnown RBP31.51■■■□□ 2.63
LTBP4-204ENST00000318809 ATAD2BQ9ULI0 1458 aa31.49■■■□□ 2.63
LTBP4-204ENST00000318809 PEG3Q9GZU2 1588 aa31.49■■■□□ 2.63
LTBP4-204ENST00000318809 DNAJC5BQ9UF47 199 aa31.47■■■□□ 2.63
LTBP4-204ENST00000318809 SMARCA2P51531 1590 aa31.43■■■□□ 2.62
LTBP4-204ENST00000318809 NCAPD3P42695 1498 aa31.34■■■□□ 2.61
LTBP4-204ENST00000318809 BAZ1BQ9UIG0 1483 aaKnown RBP31.26■■■□□ 2.59
LTBP4-204ENST00000318809 HMGXB3Q12766 1538 aa31.23■■■□□ 2.59
LTBP4-204ENST00000318809 TOP2AP11388 1531 aaKnown RBP31.18■■■□□ 2.58
LTBP4-204ENST00000318809 CCDC88BA6NC98 1476 aa30.86■■■□□ 2.53
LTBP4-204ENST00000318809 CADPSQ9ULU8 1353 aa30.49■■■□□ 2.47
LTBP4-204ENST00000318809 CFTRP13569 1480 aa30.45■■■□□ 2.47
LTBP4-204ENST00000318809 NESP48681 1621 aa30.45■■■□□ 2.46
LTBP4-204ENST00000318809 LAMC3Q9Y6N6 1575 aa30.37■■■□□ 2.45
LTBP4-204ENST00000318809 PRDM2Q13029 1718 aa30.21■■■□□ 2.43
LTBP4-204ENST00000318809 PDS5BQ9NTI5 1447 aa30.15■■■□□ 2.42
LTBP4-204ENST00000318809 FANCD2Q9BXW9 1451 aa30.14■■■□□ 2.42
LTBP4-204ENST00000318809 KIF21AQ7Z4S6 1674 aa30.06■■■□□ 2.4
LTBP4-204ENST00000318809 CEP164Q9UPV0 1460 aa30■■■□□ 2.39
LTBP4-204ENST00000318809 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
LTBP4-204ENST00000318809 ERCC6Q03468 1493 aa29.97■■■□□ 2.39
LTBP4-204ENST00000318809 WRNQ14191 1432 aaPredicted RBP eCLIP29.86■■■□□ 2.37
LTBP4-204ENST00000318809 CHIC1Q5VXU3 224 aa29.84■■■□□ 2.37
LTBP4-204ENST00000318809 URB2Q14146 1524 aaKnown RBP29.82■■■□□ 2.36
LTBP4-204ENST00000318809 MRC2Q9UBG0 1479 aa29.81■■■□□ 2.36
LTBP4-204ENST00000318809 CUX1P39880 1505 aa29.81■■■□□ 2.36
LTBP4-204ENST00000318809 SYNJ1O43426 1573 aa29.79■■■□□ 2.36
LTBP4-204ENST00000318809 THOC2Q8NI27 1593 aaKnown RBP29.76■■■□□ 2.35
LTBP4-204ENST00000318809 TOPBP1Q92547 1522 aa29.74■■■□□ 2.35
LTBP4-204ENST00000318809 DNMBPQ6XZF7 1577 aa29.74■■■□□ 2.35
LTBP4-204ENST00000318809 TOP2BQ02880 1626 aa29.7■■■□□ 2.35
LTBP4-204ENST00000318809 WDR62O43379 1518 aa29.69■■■□□ 2.34
LTBP4-204ENST00000318809 BIVM-ERCC5R4GMW8 1640 aa29.68■■■□□ 2.34
LTBP4-204ENST00000318809 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
LTBP4-204ENST00000318809 FGD5Q6ZNL6 1462 aa29.58■■■□□ 2.33
LTBP4-204ENST00000318809 POLA1P09884 1462 aaPredicted RBP29.54■■■□□ 2.32
LTBP4-204ENST00000318809 CUX2O14529 1486 aa29.47■■■□□ 2.31
LTBP4-204ENST00000318809 RAD54L2Q9Y4B4 1467 aa29.45■■■□□ 2.3
LTBP4-204ENST00000318809 SOGA1O94964 1423 aa29.43■■■□□ 2.3
LTBP4-204ENST00000318809 TARBP1Q13395 1621 aaKnown RBP29.36■■■□□ 2.29
LTBP4-204ENST00000318809 IFT140Q96RY7 1462 aa29.34■■■□□ 2.29
LTBP4-204ENST00000318809 ABCA10Q8WWZ4 1543 aa29.3■■■□□ 2.28
LTBP4-204ENST00000318809 WDR97A6NE52 1622 aa29.27■■■□□ 2.28
LTBP4-204ENST00000318809 RUSC2Q8N2Y8 1516 aa29.23■■■□□ 2.27
LTBP4-204ENST00000318809 ZNF608Q9ULD9 1512 aaPredicted RBP29.23■■■□□ 2.27
LTBP4-204ENST00000318809 TDRD9Q8NDG6 1382 aaKnown RBP29.22■■■□□ 2.27
LTBP4-204ENST00000318809 KIF27Q86VH2 1401 aa29.16■■■□□ 2.26
LTBP4-204ENST00000318809 AQRO60306 1485 aaKnown RBP eCLIP29.15■■■□□ 2.261e-6■■□□□ 14.2
LTBP4-204ENST00000318809 ABCA5Q8WWZ7 1642 aa29.12■■■□□ 2.25
LTBP4-204ENST00000318809 FAM9AQ8IZU1 332 aaPredicted RBP29.12■■■□□ 2.25
LTBP4-204ENST00000318809 GAPVD1Q14C86 1478 aa29.09■■■□□ 2.25
LTBP4-204ENST00000318809 EIF4G3O43432 1585 aaKnown RBP29.09■■■□□ 2.25
LTBP4-204ENST00000318809 EEA1Q15075 1411 aa29.04■■■□□ 2.24
LTBP4-204ENST00000318809 IGF1RP08069 1367 aa29.01■■■□□ 2.23
LTBP4-204ENST00000318809 CSRNP3Q8WYN3 585 aa28.97■■■□□ 2.23
LTBP4-204ENST00000318809 GRIN2BQ13224 1484 aa28.97■■■□□ 2.23
LTBP4-204ENST00000318809 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
LTBP4-204ENST00000318809 ERICH3Q5RHP9 1530 aa28.94■■■□□ 2.22
LTBP4-204ENST00000318809 SNAPC4Q5SXM2 1469 aa28.87■■■□□ 2.21
LTBP4-204ENST00000318809 CARMIL1Q5VZK9 1371 aa28.83■■■□□ 2.21
LTBP4-204ENST00000318809 PRXQ9BXM0 1461 aa28.81■■■□□ 2.2
LTBP4-204ENST00000318809 MAGI1Q96QZ7 1491 aaPredicted RBP28.8■■■□□ 2.2
LTBP4-204ENST00000318809 CUL7Q14999 1698 aa28.8■■■□□ 2.2
LTBP4-204ENST00000318809 ADAMTS12P58397 1594 aa28.79■■■□□ 2.2
LTBP4-204ENST00000318809 FHAD1B1AJZ9 1412 aa28.77■■■□□ 2.2
LTBP4-204ENST00000318809 EHMT2Q96KQ7 1210 aa28.72■■■□□ 2.19
LTBP4-204ENST00000318809 KIF21BO75037 1637 aa28.72■■■□□ 2.19
LTBP4-204ENST00000318809 RAPGEF2Q9Y4G8 1499 aa28.71■■■□□ 2.19
LTBP4-204ENST00000318809 SYNJ2O15056 1496 aa28.7■■■□□ 2.18
LTBP4-204ENST00000318809 LOC105371045A0A1W2PR82 267 aa28.67■■■□□ 2.18
LTBP4-204ENST00000318809 CHMP7Q8WUX9 453 aaPredicted RBP28.66■■■□□ 2.18
LTBP4-204ENST00000318809 FBLN2P98095 1184 aa28.65■■■□□ 2.18
LTBP4-204ENST00000318809 GOLGA3Q08378 1498 aa28.62■■■□□ 2.17
LTBP4-204ENST00000318809 GRIN2AQ12879 1464 aa28.62■■■□□ 2.17
LTBP4-204ENST00000318809 CHD1O14646 1710 aa28.58■■■□□ 2.17
LTBP4-204ENST00000318809 UBTFP17480 764 aaKnown RBP28.52■■■□□ 2.16
LTBP4-204ENST00000318809 CEP170Q5SW79 1584 aa28.47■■■□□ 2.15
LTBP4-204ENST00000318809 NUP160Q12769 1436 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms