RNA–Protein interactions for RNA: ENST00000375784.7

CLIC1-208, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-208ENST00000375784 NISCHQ9Y2I1 1504 aa40.55■■■■■ 4.08
CLIC1-208ENST00000375784 ABCC9O60706 1549 aa37.11■■■■□ 3.53
CLIC1-208ENST00000375784 CCDC180Q9P1Z9 1646 aa36.54■■■■□ 3.44
CLIC1-208ENST00000375784 DNAJC5BQ9UF47 199 aa35.32■■■■□ 3.24
CLIC1-208ENST00000375784 RB1CC1Q8TDY2 1594 aa35.08■■■■□ 3.21
CLIC1-208ENST00000375784 NACADO15069 1562 aa34.72■■■■□ 3.15
CLIC1-208ENST00000375784 PABPN1Q86U42 306 aaKnown RBP eCLIP34.51■■■■□ 3.12
CLIC1-208ENST00000375784 DCAF8L2P0C7V8 631 aa34.49■■■■□ 3.11
CLIC1-208ENST00000375784 UNC13AQ9UPW8 1703 aa34.18■■■■□ 3.06
CLIC1-208ENST00000375784 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
CLIC1-208ENST00000375784 BICRAQ9NZM4 1560 aa34.08■■■■□ 3.05
CLIC1-208ENST00000375784 SHROOM4Q9ULL8 1493 aa33.57■■■□□ 2.97
CLIC1-208ENST00000375784 CECR2Q9BXF3 1484 aa33.5■■■□□ 2.95
CLIC1-208ENST00000375784 ZCCHC6Q5VYS8 1495 aaKnown RBP33.49■■■□□ 2.95
CLIC1-208ENST00000375784 DCAF1Q9Y4B6 1507 aa33.47■■■□□ 2.95
CLIC1-208ENST00000375784 CC2D2AQ9P2K1 1620 aa33.46■■■□□ 2.95
CLIC1-208ENST00000375784 SCRIBQ14160 1630 aa33.28■■■□□ 2.92
CLIC1-208ENST00000375784 EIF4G1Q04637 1599 aaKnown RBP33.28■■■□□ 2.92
CLIC1-208ENST00000375784 AEBP2Q6ZN18 517 aaPredicted RBP32.84■■■□□ 2.85
CLIC1-208ENST00000375784 DNAJC5Q9H3Z4 198 aa32.82■■■□□ 2.84
CLIC1-208ENST00000375784 CUX2O14529 1486 aa32.2■■■□□ 2.75
CLIC1-208ENST00000375784 NCAPD3P42695 1498 aa32.1■■■□□ 2.73
CLIC1-208ENST00000375784 ERCC6Q03468 1493 aa32.08■■■□□ 2.73
CLIC1-208ENST00000375784 ATAD2BQ9ULI0 1458 aa31.91■■■□□ 2.7
CLIC1-208ENST00000375784 SMARCA2P51531 1590 aa31.77■■■□□ 2.68
CLIC1-208ENST00000375784 HMGXB3Q12766 1538 aa31.77■■■□□ 2.68
CLIC1-208ENST00000375784 NESP48681 1621 aa31.73■■■□□ 2.67
CLIC1-208ENST00000375784 SMARCA4P51532 1647 aa31.71■■■□□ 2.67
CLIC1-208ENST00000375784 BAZ1BQ9UIG0 1483 aaKnown RBP31.56■■■□□ 2.64
CLIC1-208ENST00000375784 BAZ1AQ9NRL2 1556 aaPredicted RBP31.5■■■□□ 2.63
CLIC1-208ENST00000375784 THOC2Q8NI27 1593 aaKnown RBP31.47■■■□□ 2.63
CLIC1-208ENST00000375784 PEG3Q9GZU2 1588 aa31.43■■■□□ 2.62
CLIC1-208ENST00000375784 LAMC3Q9Y6N6 1575 aa31.4■■■□□ 2.62
CLIC1-208ENST00000375784 CHIC1Q5VXU3 224 aa31.37■■■□□ 2.61
CLIC1-208ENST00000375784 PDS5BQ9NTI5 1447 aa31.29■■■□□ 2.6
CLIC1-208ENST00000375784 MROH2BQ7Z745 1585 aa31.24■■■□□ 2.59
CLIC1-208ENST00000375784 KIF21AQ7Z4S6 1674 aa31.23■■■□□ 2.59
CLIC1-208ENST00000375784 TRIM41Q8WV44 630 aa31.14■■■□□ 2.58
CLIC1-208ENST00000375784 CADPSQ9ULU8 1353 aa31.1■■■□□ 2.57
CLIC1-208ENST00000375784 MRC2Q9UBG0 1479 aa31.02■■■□□ 2.56
CLIC1-208ENST00000375784 WDR62O43379 1518 aa30.95■■■□□ 2.55
CLIC1-208ENST00000375784 WIZO95785 1651 aa30.8■■■□□ 2.52
CLIC1-208ENST00000375784 CEP164Q9UPV0 1460 aa30.79■■■□□ 2.52
CLIC1-208ENST00000375784 FANCD2Q9BXW9 1451 aa30.73■■■□□ 2.51
CLIC1-208ENST00000375784 OSCARQ8IYS5 282 aa30.69■■■□□ 2.5
CLIC1-208ENST00000375784 CFTRP13569 1480 aa30.63■■■□□ 2.49
CLIC1-208ENST00000375784 RSF1Q96T23 1441 aaPredicted RBP30.6■■■□□ 2.49
CLIC1-208ENST00000375784 URB2Q14146 1524 aaKnown RBP30.51■■■□□ 2.47
CLIC1-208ENST00000375784 TOP2AP11388 1531 aaKnown RBP30.4■■■□□ 2.46
CLIC1-208ENST00000375784 RIMBP3CA6NJZ7 1639 aa30.26■■■□□ 2.44
CLIC1-208ENST00000375784 RIMBP3BA6NNM3 1639 aa30.26■■■□□ 2.44
CLIC1-208ENST00000375784 RIMBP3Q9UFD9 1639 aa30.26■■■□□ 2.44
CLIC1-208ENST00000375784 ZNF608Q9ULD9 1512 aaPredicted RBP30.22■■■□□ 2.43
CLIC1-208ENST00000375784 IFT140Q96RY7 1462 aa30.21■■■□□ 2.43
CLIC1-208ENST00000375784 ARHGEF11O15085 1522 aa30.15■■■□□ 2.42
CLIC1-208ENST00000375784 PRDM2Q13029 1718 aa30.14■■■□□ 2.42
CLIC1-208ENST00000375784 CCDC88BA6NC98 1476 aa30.09■■■□□ 2.41
CLIC1-208ENST00000375784 TOPBP1Q92547 1522 aa30.08■■■□□ 2.41
CLIC1-208ENST00000375784 CYB5RLQ6IPT4 315 aa30■■■□□ 2.39
CLIC1-208ENST00000375784 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
CLIC1-208ENST00000375784 EIF4G3O43432 1585 aaKnown RBP29.98■■■□□ 2.39
CLIC1-208ENST00000375784 DNMBPQ6XZF7 1577 aa29.9■■■□□ 2.38
CLIC1-208ENST00000375784 AQRO60306 1485 aaKnown RBP eCLIP29.89■■■□□ 2.381e-9■■■■■ 31.5
CLIC1-208ENST00000375784 SUPT5HO00267 1087 aaKnown RBP29.86■■■□□ 2.37
CLIC1-208ENST00000375784 TARBP1Q13395 1621 aaKnown RBP29.83■■■□□ 2.37
CLIC1-208ENST00000375784 TRHP20396 242 aaPredicted RBP29.83■■■□□ 2.37
CLIC1-208ENST00000375784 ARAP1Q96P48 1450 aa29.82■■■□□ 2.36
CLIC1-208ENST00000375784 FBLN2P98095 1184 aa29.81■■■□□ 2.36
CLIC1-208ENST00000375784 CHD1O14646 1710 aa29.81■■■□□ 2.36
CLIC1-208ENST00000375784 POLA1P09884 1462 aaPredicted RBP29.74■■■□□ 2.35
CLIC1-208ENST00000375784 RAD54L2Q9Y4B4 1467 aa29.66■■■□□ 2.34
CLIC1-208ENST00000375784 TDRD9Q8NDG6 1382 aaKnown RBP29.64■■■□□ 2.34
CLIC1-208ENST00000375784 SOGA1O94964 1423 aa29.62■■■□□ 2.33
CLIC1-208ENST00000375784 SNAPC4Q5SXM2 1469 aa29.55■■■□□ 2.32
CLIC1-208ENST00000375784 CLASP1Q7Z460 1538 aa29.52■■■□□ 2.32
CLIC1-208ENST00000375784 CHMP7Q8WUX9 453 aaPredicted RBP29.51■■■□□ 2.31
CLIC1-208ENST00000375784 WDR97A6NE52 1622 aa29.49■■■□□ 2.31
CLIC1-208ENST00000375784 FGD5Q6ZNL6 1462 aa29.48■■■□□ 2.31
CLIC1-208ENST00000375784 SYNJ1O43426 1573 aa29.45■■■□□ 2.31
CLIC1-208ENST00000375784 MAGI1Q96QZ7 1491 aaPredicted RBP29.45■■■□□ 2.31
CLIC1-208ENST00000375784 GRIN2BQ13224 1484 aa29.42■■■□□ 2.3
CLIC1-208ENST00000375784 SYNJ2O15056 1496 aa29.37■■■□□ 2.29
CLIC1-208ENST00000375784 CUX1P39880 1505 aa29.37■■■□□ 2.29
CLIC1-208ENST00000375784 GAPVD1Q14C86 1478 aa29.27■■■□□ 2.28
CLIC1-208ENST00000375784 PBRM1Q86U86 1689 aa29.17■■■□□ 2.26
CLIC1-208ENST00000375784 ABCA10Q8WWZ4 1543 aa29.13■■■□□ 2.25
CLIC1-208ENST00000375784 ABCA5Q8WWZ7 1642 aa29.09■■■□□ 2.25
CLIC1-208ENST00000375784 ERCC6L2Q5T890 1561 aa29.03■■■□□ 2.24
CLIC1-208ENST00000375784 GRIN2AQ12879 1464 aa29.02■■■□□ 2.24
CLIC1-208ENST00000375784 NUP160Q12769 1436 aa28.96■■■□□ 2.23
CLIC1-208ENST00000375784 CEP170Q5SW79 1584 aa28.94■■■□□ 2.22
CLIC1-208ENST00000375784 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.229e-8■□□□□ 9
CLIC1-208ENST00000375784 ADAMTS12P58397 1594 aa28.9■■■□□ 2.22
CLIC1-208ENST00000375784 FHAD1B1AJZ9 1412 aa28.86■■■□□ 2.21
CLIC1-208ENST00000375784 SHROOM2Q13796 1616 aa28.84■■■□□ 2.21
CLIC1-208ENST00000375784 TOP2BQ02880 1626 aa28.75■■■□□ 2.19
CLIC1-208ENST00000375784 ERICH3Q5RHP9 1530 aa28.74■■■□□ 2.19
CLIC1-208ENST00000375784 PRG4Q92954 1404 aaPredicted RBP28.73■■■□□ 2.19
CLIC1-208ENST00000375784 BIVM-ERCC5R4GMW8 1640 aa28.72■■■□□ 2.19
CLIC1-208ENST00000375784 KIF13AQ9H1H9 1805 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms