RNA–Protein interactions for RNA: ENST00000474253.1

TPI1-204, Transcript of triosephosphate isomerase 1, humanhuman

TSL 1 (best)

Gene TPI1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPI1-204ENST00000474253 NISCHQ9Y2I1 1504 aa28.64■■■□□ 2.17
TPI1-204ENST00000474253 CCDC180Q9P1Z9 1646 aa25.74■■□□□ 1.71
TPI1-204ENST00000474253 ABCC9O60706 1549 aa25.32■■□□□ 1.64
TPI1-204ENST00000474253 RB1CC1Q8TDY2 1594 aa24.27■■□□□ 1.48
TPI1-204ENST00000474253 NACADO15069 1562 aa24.16■■□□□ 1.46
TPI1-204ENST00000474253 MYO15BQ96JP2 1530 aa23.94■■□□□ 1.42
TPI1-204ENST00000474253 UNC13AQ9UPW8 1703 aa23.92■■□□□ 1.42
TPI1-204ENST00000474253 ZCCHC6Q5VYS8 1495 aaKnown RBP23.82■■□□□ 1.4
TPI1-204ENST00000474253 DCAF8L2P0C7V8 631 aa23.77■■□□□ 1.4
TPI1-204ENST00000474253 DCAF1Q9Y4B6 1507 aa23.72■■□□□ 1.39
TPI1-204ENST00000474253 BICRAQ9NZM4 1560 aa23.63■■□□□ 1.37
TPI1-204ENST00000474253 DNAJC5BQ9UF47 199 aa23.5■■□□□ 1.35
TPI1-204ENST00000474253 PABPN1Q86U42 306 aaKnown RBP eCLIP23.49■■□□□ 1.35
TPI1-204ENST00000474253 SCRIBQ14160 1630 aa23.36■■□□□ 1.33
TPI1-204ENST00000474253 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
TPI1-204ENST00000474253 EIF4G1Q04637 1599 aaKnown RBP22.98■■□□□ 1.27
TPI1-204ENST00000474253 CC2D2AQ9P2K1 1620 aa22.97■■□□□ 1.27
TPI1-204ENST00000474253 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
TPI1-204ENST00000474253 SMARCA4P51532 1647 aa22.35■■□□□ 1.17
TPI1-204ENST00000474253 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
TPI1-204ENST00000474253 ATAD2BQ9ULI0 1458 aa22.23■■□□□ 1.15
TPI1-204ENST00000474253 BAZ1AQ9NRL2 1556 aaPredicted RBP22.22■■□□□ 1.15
TPI1-204ENST00000474253 SMARCA2P51531 1590 aa22.21■■□□□ 1.15
TPI1-204ENST00000474253 HMGXB3Q12766 1538 aa22.2■■□□□ 1.14
TPI1-204ENST00000474253 PEG3Q9GZU2 1588 aa22.16■■□□□ 1.14
TPI1-204ENST00000474253 MROH2BQ7Z745 1585 aa22.07■■□□□ 1.12
TPI1-204ENST00000474253 BAZ1BQ9UIG0 1483 aaKnown RBP22.01■■□□□ 1.11
TPI1-204ENST00000474253 WIZO95785 1651 aa21.86■■□□□ 1.09
TPI1-204ENST00000474253 NESP48681 1621 aa21.85■■□□□ 1.09
TPI1-204ENST00000474253 ERCC6Q03468 1493 aa21.8■■□□□ 1.08
TPI1-204ENST00000474253 LAMC3Q9Y6N6 1575 aa21.78■■□□□ 1.08
TPI1-204ENST00000474253 CUX2O14529 1486 aa21.77■■□□□ 1.07
TPI1-204ENST00000474253 KIF21AQ7Z4S6 1674 aa21.71■■□□□ 1.07
TPI1-204ENST00000474253 THOC2Q8NI27 1593 aaKnown RBP21.7■■□□□ 1.06
TPI1-204ENST00000474253 RSF1Q96T23 1441 aaPredicted RBP21.64■■□□□ 1.06
TPI1-204ENST00000474253 TOP2AP11388 1531 aaKnown RBP21.58■■□□□ 1.04
TPI1-204ENST00000474253 CADPSQ9ULU8 1353 aa21.54■■□□□ 1.04
TPI1-204ENST00000474253 PDS5BQ9NTI5 1447 aa21.53■■□□□ 1.04
TPI1-204ENST00000474253 PRDM2Q13029 1718 aa21.43■■□□□ 1.02
TPI1-204ENST00000474253 WDR62O43379 1518 aa21.4■■□□□ 1.02
TPI1-204ENST00000474253 CFTRP13569 1480 aa21.4■■□□□ 1.02
TPI1-204ENST00000474253 MRC2Q9UBG0 1479 aa21.39■■□□□ 1.02
TPI1-204ENST00000474253 DNAJC5Q9H3Z4 198 aa21.38■■□□□ 1.01
TPI1-204ENST00000474253 CEP164Q9UPV0 1460 aa21.35■■□□□ 1.01
TPI1-204ENST00000474253 FANCD2Q9BXW9 1451 aa21.33■■□□□ 1.01
TPI1-204ENST00000474253 CCDC88BA6NC98 1476 aa21.26■□□□□ 0.99
TPI1-204ENST00000474253 URB2Q14146 1524 aaKnown RBP21.19■□□□□ 0.98
TPI1-204ENST00000474253 TOPBP1Q92547 1522 aa20.99■□□□□ 0.95
TPI1-204ENST00000474253 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
TPI1-204ENST00000474253 ABCC8Q09428 1581 aa20.92■□□□□ 0.94
TPI1-204ENST00000474253 IFT140Q96RY7 1462 aa20.9■□□□□ 0.94
TPI1-204ENST00000474253 ZNF608Q9ULD9 1512 aaPredicted RBP20.87■□□□□ 0.93
TPI1-204ENST00000474253 TARBP1Q13395 1621 aaKnown RBP20.86■□□□□ 0.93
TPI1-204ENST00000474253 EIF4G3O43432 1585 aaKnown RBP20.86■□□□□ 0.93
TPI1-204ENST00000474253 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
TPI1-204ENST00000474253 CUX1P39880 1505 aa20.73■□□□□ 0.91
TPI1-204ENST00000474253 WDR97A6NE52 1622 aa20.7■□□□□ 0.9
TPI1-204ENST00000474253 CHD1O14646 1710 aa20.7■□□□□ 0.9
TPI1-204ENST00000474253 FGD5Q6ZNL6 1462 aa20.69■□□□□ 0.9
TPI1-204ENST00000474253 SUPT5HO00267 1087 aaKnown RBP20.66■□□□□ 0.9
TPI1-204ENST00000474253 RAD54L2Q9Y4B4 1467 aa20.66■□□□□ 0.9
TPI1-204ENST00000474253 AQRO60306 1485 aaKnown RBP eCLIP20.65■□□□□ 0.94e-7■■■■■ 26.9
TPI1-204ENST00000474253 OSCARQ8IYS5 282 aa20.65■□□□□ 0.9
TPI1-204ENST00000474253 SOGA1O94964 1423 aa20.6■□□□□ 0.89
TPI1-204ENST00000474253 RIMBP3CA6NJZ7 1639 aa20.57■□□□□ 0.88
TPI1-204ENST00000474253 RIMBP3BA6NNM3 1639 aa20.57■□□□□ 0.88
TPI1-204ENST00000474253 RIMBP3Q9UFD9 1639 aa20.57■□□□□ 0.88
TPI1-204ENST00000474253 PBRM1Q86U86 1689 aa20.55■□□□□ 0.88
TPI1-204ENST00000474253 BIVM-ERCC5R4GMW8 1640 aa20.54■□□□□ 0.88
TPI1-204ENST00000474253 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
TPI1-204ENST00000474253 ABCA5Q8WWZ7 1642 aa20.51■□□□□ 0.87
TPI1-204ENST00000474253 SNAPC4Q5SXM2 1469 aa20.5■□□□□ 0.87
TPI1-204ENST00000474253 TOP2BQ02880 1626 aa20.49■□□□□ 0.87
TPI1-204ENST00000474253 ARHGEF11O15085 1522 aa20.49■□□□□ 0.87
TPI1-204ENST00000474253 SYNJ1O43426 1573 aa20.48■□□□□ 0.87
TPI1-204ENST00000474253 ABCA10Q8WWZ4 1543 aa20.48■□□□□ 0.87
TPI1-204ENST00000474253 MAGI1Q96QZ7 1491 aaPredicted RBP20.46■□□□□ 0.87
TPI1-204ENST00000474253 TRIM41Q8WV44 630 aa20.46■□□□□ 0.87
TPI1-204ENST00000474253 GRIN2BQ13224 1484 aa20.45■□□□□ 0.86
TPI1-204ENST00000474253 CLASP1Q7Z460 1538 aa20.43■□□□□ 0.86
TPI1-204ENST00000474253 GAPVD1Q14C86 1478 aa20.41■□□□□ 0.86
TPI1-204ENST00000474253 WRNQ14191 1432 aaPredicted RBP eCLIP20.39■□□□□ 0.85
TPI1-204ENST00000474253 SYNJ2O15056 1496 aa20.38■□□□□ 0.85
TPI1-204ENST00000474253 ADAMTS12P58397 1594 aa20.33■□□□□ 0.84
TPI1-204ENST00000474253 FBLN2P98095 1184 aa20.32■□□□□ 0.84
TPI1-204ENST00000474253 ARAP1Q96P48 1450 aa20.3■□□□□ 0.84
TPI1-204ENST00000474253 CHMP7Q8WUX9 453 aaPredicted RBP20.24■□□□□ 0.83
TPI1-204ENST00000474253 ERICH3Q5RHP9 1530 aa20.23■□□□□ 0.83
TPI1-204ENST00000474253 GRIN2AQ12879 1464 aa20.22■□□□□ 0.83
TPI1-204ENST00000474253 CEP170Q5SW79 1584 aa20.2■□□□□ 0.82
TPI1-204ENST00000474253 NUP160Q12769 1436 aa20.16■□□□□ 0.82
TPI1-204ENST00000474253 FHAD1B1AJZ9 1412 aa20.15■□□□□ 0.82
TPI1-204ENST00000474253 SHROOM2Q13796 1616 aa20.14■□□□□ 0.81
TPI1-204ENST00000474253 CYB5RLQ6IPT4 315 aa20.13■□□□□ 0.81
TPI1-204ENST00000474253 ERCC6L2Q5T890 1561 aa20.09■□□□□ 0.81
TPI1-204ENST00000474253 RUSC2Q8N2Y8 1516 aa20.05■□□□□ 0.8
TPI1-204ENST00000474253 CUL7Q14999 1698 aa20.03■□□□□ 0.8
TPI1-204ENST00000474253 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
TPI1-204ENST00000474253 IGF1RP08069 1367 aa19.92■□□□□ 0.78
TPI1-204ENST00000474253 PRG4Q92954 1404 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms