RNA–Protein interactions for RNA: ENST00000542928.5

COPS2-203, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2 BASIC

Gene COPS2, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-203ENST00000542928 AEBP2Q6ZN18 517 aaPredicted RBP22.43■■□□□ 1.18
COPS2-203ENST00000542928 CHIC1Q5VXU3 224 aa21.2■□□□□ 0.98
COPS2-203ENST00000542928 SENP3Q9H4L4 574 aaPredicted RBP19.44■□□□□ 0.7
COPS2-203ENST00000542928 PHF23Q9BUL5 403 aaPredicted RBP19.02■□□□□ 0.64
COPS2-203ENST00000542928 FOXD1Q16676 465 aa18.05■□□□□ 0.48
COPS2-203ENST00000542928 POTEDQ86YR6 584 aa17.7■□□□□ 0.42
COPS2-203ENST00000542928 MSH5O43196 834 aa17.28■□□□□ 0.36
COPS2-203ENST00000542928 PIAS4Q8N2W9 510 aaPredicted RBP16.82■□□□□ 0.28
COPS2-203ENST00000542928 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
COPS2-203ENST00000542928 PPP6R1Q9UPN7 881 aa16.37■□□□□ 0.21
COPS2-203ENST00000542928 ADRA2BP18089 450 aa16.34■□□□□ 0.21
COPS2-203ENST00000542928 DMRT2Q9Y5R5 561 aa15.26■□□□□ 0.03
COPS2-203ENST00000542928 SCAF1Q9H7N4 1312 aaKnown RBP15.19■□□□□ 0.02
COPS2-203ENST00000542928 CACNB1Q02641 598 aaPredicted RBP15.16■□□□□ 0.02
COPS2-203ENST00000542928 MAPK8IP2Q13387 824 aaPredicted RBP15.15■□□□□ 0.02
COPS2-203ENST00000542928 DCAF8L1A6NGE4 600 aa14.76□□□□□ -0.05
COPS2-203ENST00000542928 RNF39Q9H2S5 420 aa14.59□□□□□ -0.07
COPS2-203ENST00000542928 HOXD11P31277 338 aaPredicted RBP14.47□□□□□ -0.09
COPS2-203ENST00000542928 C1QBPQ07021 282 aaKnown RBP14.43□□□□□ -0.1
COPS2-203ENST00000542928 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
COPS2-203ENST00000542928 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
COPS2-203ENST00000542928 CNKSR2Q8WXI2 1034 aa14.25□□□□□ -0.13
COPS2-203ENST00000542928 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
COPS2-203ENST00000542928 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.88□□□□□ -0.196e-6■□□□□ 8.3
COPS2-203ENST00000542928 POTEHQ6S545 545 aa13.8□□□□□ -0.2
COPS2-203ENST00000542928 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
COPS2-203ENST00000542928 CAPN15O75808 1086 aa13.49□□□□□ -0.25
COPS2-203ENST00000542928 DSG3P32926 999 aa13.45□□□□□ -0.26
COPS2-203ENST00000542928 U3KPZ7 1027 aaPredicted RBP13.4□□□□□ -0.26
COPS2-203ENST00000542928 NPM3O75607 178 aaKnown RBP13.37□□□□□ -0.27
COPS2-203ENST00000542928 SPINK5Q9NQ38 1064 aaPredicted RBP13.36□□□□□ -0.27
COPS2-203ENST00000542928 APLP2Q06481 763 aa13.24□□□□□ -0.29
COPS2-203ENST00000542928 ZNF219Q9P2Y4 722 aaPredicted RBP13.14□□□□□ -0.31
COPS2-203ENST00000542928 TRHP20396 242 aaPredicted RBP13.11□□□□□ -0.31
COPS2-203ENST00000542928 ABCB7O75027 752 aa13.05□□□□□ -0.32
COPS2-203ENST00000542928 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.04□□□□□ -0.32
COPS2-203ENST00000542928 HNRNPUL2Q1KMD3 747 aaKnown RBP13.04□□□□□ -0.32
COPS2-203ENST00000542928 RBM42Q9BTD8 480 aaKnown RBP13.03□□□□□ -0.32
COPS2-203ENST00000542928 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
COPS2-203ENST00000542928 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
COPS2-203ENST00000542928 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
COPS2-203ENST00000542928 SP7Q8TDD2 431 aaPredicted RBP12.69□□□□□ -0.38
COPS2-203ENST00000542928 POLA2Q14181 598 aa12.61□□□□□ -0.39
COPS2-203ENST00000542928 KCNA4P22459 653 aa12.59□□□□□ -0.39
COPS2-203ENST00000542928 AKT1S1Q96B36 256 aa12.53□□□□□ -0.4
COPS2-203ENST00000542928 MYCNP04198 464 aaPredicted RBP12.48□□□□□ -0.41
COPS2-203ENST00000542928 ZBTB12Q9Y330 459 aaPredicted RBP12.45□□□□□ -0.42
COPS2-203ENST00000542928 HAX1O00165 279 aa12.41□□□□□ -0.42
COPS2-203ENST00000542928 PIP4P2Q8N4L2 257 aa12.38□□□□□ -0.43
COPS2-203ENST00000542928 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
COPS2-203ENST00000542928 FXR2P51116 673 aaKnown RBP eCLIP12.22□□□□□ -0.457e-6■■■■□ 19.6
COPS2-203ENST00000542928 PITPNM1O00562 1244 aa12.21□□□□□ -0.46
COPS2-203ENST00000542928 OSCARQ8IYS5 282 aa12.2□□□□□ -0.46
COPS2-203ENST00000542928 ATF5Q9Y2D1 282 aaPredicted RBP12.05□□□□□ -0.48
COPS2-203ENST00000542928 FOXD4L1Q9NU39 408 aa12.02□□□□□ -0.49
COPS2-203ENST00000542928 EVX2Q03828 476 aa12.01□□□□□ -0.49
COPS2-203ENST00000542928 SPDYE2BA6NHP3 402 aa11.94□□□□□ -0.5
COPS2-203ENST00000542928 SPDYE6P0CI01 402 aa11.94□□□□□ -0.5
COPS2-203ENST00000542928 SPDYE2Q495Y8 402 aa11.94□□□□□ -0.5
COPS2-203ENST00000542928 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
COPS2-203ENST00000542928 SLC4A1APQ9BWU0 796 aaKnown RBP11.92□□□□□ -0.5
COPS2-203ENST00000542928 LHX8Q68G74 356 aa11.9□□□□□ -0.5
COPS2-203ENST00000542928 SPDYE1Q8NFV5 336 aaPredicted RBP11.9□□□□□ -0.5
COPS2-203ENST00000542928 FBLN2P98095 1184 aa11.88□□□□□ -0.51
COPS2-203ENST00000542928 CLEC11AQ9Y240 323 aa11.88□□□□□ -0.51
COPS2-203ENST00000542928 C19orf67A6NJJ6 358 aa11.85□□□□□ -0.51
COPS2-203ENST00000542928 GABBR2O75899 941 aa11.83□□□□□ -0.52
COPS2-203ENST00000542928 ATXN8OSP0DMR3 200 aa11.75□□□□□ -0.53
COPS2-203ENST00000542928 ZNF692Q9BU19 519 aaPredicted RBP11.71□□□□□ -0.54
COPS2-203ENST00000542928 PLSCR2Q9NRY7 297 aa11.66□□□□□ -0.54
COPS2-203ENST00000542928 SSUH2Q9Y2M2 353 aa11.63□□□□□ -0.55
COPS2-203ENST00000542928 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
COPS2-203ENST00000542928 CLCN6P51797 869 aa11.62□□□□□ -0.55
COPS2-203ENST00000542928 CHADLQ6NUI6 762 aa11.61□□□□□ -0.55
COPS2-203ENST00000542928 CD44P16070 742 aaKnown RBP11.54□□□□□ -0.56
COPS2-203ENST00000542928 DCBLD2Q96PD2 775 aa11.51□□□□□ -0.57
COPS2-203ENST00000542928 MKRN4PQ13434 485 aaPredicted RBP11.49□□□□□ -0.57
COPS2-203ENST00000542928 ZBTB22O15209 634 aa11.47□□□□□ -0.57
COPS2-203ENST00000542928 PABPN1Q86U42 306 aaKnown RBP eCLIP11.47□□□□□ -0.57
COPS2-203ENST00000542928 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
COPS2-203ENST00000542928 FARP1Q9Y4F1 1045 aaPredicted RBP11.44□□□□□ -0.58
COPS2-203ENST00000542928 ZNF579Q8NAF0 562 aaKnown RBP11.31□□□□□ -0.6
COPS2-203ENST00000542928 ZRANB1Q9UGI0 708 aa11.29□□□□□ -0.6
COPS2-203ENST00000542928 POTEMA6NI47 508 aa11.23□□□□□ -0.61
COPS2-203ENST00000542928 PAK3O75914 559 aaPredicted RBP11.21□□□□□ -0.61
COPS2-203ENST00000542928 OTUD5Q96G74 571 aa11.21□□□□□ -0.61
COPS2-203ENST00000542928 PCDH10Q9P2E7 1040 aa11.2□□□□□ -0.62
COPS2-203ENST00000542928 POTEGQ6S5H5 508 aa11.17□□□□□ -0.62
COPS2-203ENST00000542928 STAG3Q9UJ98 1225 aa11.16□□□□□ -0.62
COPS2-203ENST00000542928 GALR2O43603 387 aaPredicted RBP11.16□□□□□ -0.62
COPS2-203ENST00000542928 CREBZFQ9NS37 354 aa11.07□□□□□ -0.64
COPS2-203ENST00000542928 POTEB2H3BUK9 544 aa11.07□□□□□ -0.64
COPS2-203ENST00000542928 MAMSTRQ6ZN01 415 aa11.06□□□□□ -0.64
COPS2-203ENST00000542928 NPM1P06748 294 aaKnown RBP eCLIP11.03□□□□□ -0.64
COPS2-203ENST00000542928 PHF12Q96QT6 1004 aa11.01□□□□□ -0.65
COPS2-203ENST00000542928 C7P10643 843 aa10.99□□□□□ -0.65
COPS2-203ENST00000542928 SLC39A7Q92504 469 aa10.99□□□□□ -0.65
COPS2-203ENST00000542928 METRNQ9UJH8 293 aa10.98□□□□□ -0.65
COPS2-203ENST00000542928 PELP1Q8IZL8 1130 aaKnown RBP10.94□□□□□ -0.66
COPS2-203ENST00000542928 SCUBE2Q9NQ36 999 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms