RNA–Protein interactions for RNA: ENST00000552540.5

NACA-221, Transcript of nascent polypeptide associated complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NACA, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NACA-221ENST00000552540 NISCHQ9Y2I1 1504 aa33.86■■■■□ 3.01
NACA-221ENST00000552540 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
NACA-221ENST00000552540 ABCC9O60706 1549 aa29.34■■■□□ 2.29
NACA-221ENST00000552540 DCAF8L2P0C7V8 631 aa28.41■■■□□ 2.14
NACA-221ENST00000552540 ZCCHC6Q5VYS8 1495 aaKnown RBP28.22■■■□□ 2.11
NACA-221ENST00000552540 RB1CC1Q8TDY2 1594 aa28.2■■■□□ 2.11
NACA-221ENST00000552540 NACADO15069 1562 aa28.18■■■□□ 2.1
NACA-221ENST00000552540 MYO15BQ96JP2 1530 aa27.98■■■□□ 2.07
NACA-221ENST00000552540 DCAF1Q9Y4B6 1507 aa27.95■■■□□ 2.06
NACA-221ENST00000552540 UNC13AQ9UPW8 1703 aa27.6■■■□□ 2.01
NACA-221ENST00000552540 SCRIBQ14160 1630 aa27.49■■□□□ 1.99
NACA-221ENST00000552540 PABPN1Q86U42 306 aaKnown RBP eCLIP27.48■■□□□ 1.99
NACA-221ENST00000552540 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
NACA-221ENST00000552540 SHROOM4Q9ULL8 1493 aa27■■□□□ 1.91
NACA-221ENST00000552540 DNAJC5BQ9UF47 199 aa26.79■■□□□ 1.88
NACA-221ENST00000552540 EIF4G1Q04637 1599 aaKnown RBP26.62■■□□□ 1.85
NACA-221ENST00000552540 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
NACA-221ENST00000552540 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
NACA-221ENST00000552540 SMARCA4P51532 1647 aa26.25■■□□□ 1.79
NACA-221ENST00000552540 BAZ1AQ9NRL2 1556 aaPredicted RBP26.23■■□□□ 1.79
NACA-221ENST00000552540 MROH2BQ7Z745 1585 aa26.13■■□□□ 1.77
NACA-221ENST00000552540 ATAD2BQ9ULI0 1458 aa26.07■■□□□ 1.76
NACA-221ENST00000552540 SMARCA2P51531 1590 aa26.02■■□□□ 1.76
NACA-221ENST00000552540 NCAPD3P42695 1498 aa26■■□□□ 1.75
NACA-221ENST00000552540 PEG3Q9GZU2 1588 aa25.93■■□□□ 1.74
NACA-221ENST00000552540 WIZO95785 1651 aa25.89■■□□□ 1.73
NACA-221ENST00000552540 BAZ1BQ9UIG0 1483 aaKnown RBP25.88■■□□□ 1.73
NACA-221ENST00000552540 HMGXB3Q12766 1538 aa25.87■■□□□ 1.73
NACA-221ENST00000552540 RSF1Q96T23 1441 aaPredicted RBP25.87■■□□□ 1.73
NACA-221ENST00000552540 TOP2AP11388 1531 aaKnown RBP25.57■■□□□ 1.68
NACA-221ENST00000552540 SUPT5HO00267 1087 aaKnown RBP25.47■■□□□ 1.67
NACA-221ENST00000552540 NESP48681 1621 aa25.42■■□□□ 1.66
NACA-221ENST00000552540 CCDC88BA6NC98 1476 aa25.3■■□□□ 1.64
NACA-221ENST00000552540 LAMC3Q9Y6N6 1575 aa25.3■■□□□ 1.64
NACA-221ENST00000552540 CADPSQ9ULU8 1353 aa25.28■■□□□ 1.64
NACA-221ENST00000552540 ERCC6Q03468 1493 aa25.26■■□□□ 1.63
NACA-221ENST00000552540 PDS5BQ9NTI5 1447 aa25.14■■□□□ 1.62
NACA-221ENST00000552540 CFTRP13569 1480 aa25.14■■□□□ 1.61
NACA-221ENST00000552540 KIF21AQ7Z4S6 1674 aa25.1■■□□□ 1.61
NACA-221ENST00000552540 AEBP2Q6ZN18 517 aaPredicted RBP25.09■■□□□ 1.61
NACA-221ENST00000552540 FANCD2Q9BXW9 1451 aa25.02■■□□□ 1.6
NACA-221ENST00000552540 PRDM2Q13029 1718 aa24.98■■□□□ 1.59
NACA-221ENST00000552540 CEP164Q9UPV0 1460 aa24.96■■□□□ 1.59
NACA-221ENST00000552540 THOC2Q8NI27 1593 aaKnown RBP24.94■■□□□ 1.58
NACA-221ENST00000552540 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.57
NACA-221ENST00000552540 CUX2O14529 1486 aa24.85■■□□□ 1.57
NACA-221ENST00000552540 WDR62O43379 1518 aa24.77■■□□□ 1.56
NACA-221ENST00000552540 URB2Q14146 1524 aaKnown RBP24.75■■□□□ 1.55
NACA-221ENST00000552540 CHIC1Q5VXU3 224 aa24.63■■□□□ 1.53
NACA-221ENST00000552540 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
NACA-221ENST00000552540 DNMBPQ6XZF7 1577 aa24.59■■□□□ 1.53
NACA-221ENST00000552540 ABCC8Q09428 1581 aa24.59■■□□□ 1.53
NACA-221ENST00000552540 CUX1P39880 1505 aa24.5■■□□□ 1.51
NACA-221ENST00000552540 POLA1P09884 1462 aaPredicted RBP24.42■■□□□ 1.5
NACA-221ENST00000552540 FGD5Q6ZNL6 1462 aa24.41■■□□□ 1.5
NACA-221ENST00000552540 IFT140Q96RY7 1462 aa24.41■■□□□ 1.5
NACA-221ENST00000552540 WRNQ14191 1432 aaPredicted RBP eCLIP24.4■■□□□ 1.5
NACA-221ENST00000552540 RAD54L2Q9Y4B4 1467 aa24.37■■□□□ 1.49
NACA-221ENST00000552540 SOGA1O94964 1423 aa24.35■■□□□ 1.49
NACA-221ENST00000552540 SYNJ1O43426 1573 aa24.35■■□□□ 1.49
NACA-221ENST00000552540 ZNF608Q9ULD9 1512 aaPredicted RBP24.34■■□□□ 1.49
NACA-221ENST00000552540 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
NACA-221ENST00000552540 TOP2BQ02880 1626 aa24.31■■□□□ 1.48
NACA-221ENST00000552540 BIVM-ERCC5R4GMW8 1640 aa24.3■■□□□ 1.48
NACA-221ENST00000552540 AQRO60306 1485 aaKnown RBP eCLIP24.23■■□□□ 1.479e-8■■■■■ 30.5
NACA-221ENST00000552540 EIF4G3O43432 1585 aaKnown RBP24.23■■□□□ 1.47
NACA-221ENST00000552540 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
NACA-221ENST00000552540 WDR97A6NE52 1622 aa24.16■■□□□ 1.46
NACA-221ENST00000552540 ABCA10Q8WWZ4 1543 aa24.13■■□□□ 1.45
NACA-221ENST00000552540 GAPVD1Q14C86 1478 aa24.06■■□□□ 1.44
NACA-221ENST00000552540 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
NACA-221ENST00000552540 GRIN2BQ13224 1484 aa24.01■■□□□ 1.43
NACA-221ENST00000552540 PBRM1Q86U86 1689 aa24.01■■□□□ 1.43
NACA-221ENST00000552540 TRIM41Q8WV44 630 aa24■■□□□ 1.43
NACA-221ENST00000552540 SNAPC4Q5SXM2 1469 aa24■■□□□ 1.43
NACA-221ENST00000552540 FBLN2P98095 1184 aa23.98■■□□□ 1.43
NACA-221ENST00000552540 DNAJC5Q9H3Z4 198 aa23.97■■□□□ 1.43
NACA-221ENST00000552540 OSCARQ8IYS5 282 aa23.92■■□□□ 1.42
NACA-221ENST00000552540 CHD1O14646 1710 aa23.92■■□□□ 1.42
NACA-221ENST00000552540 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
NACA-221ENST00000552540 CHMP7Q8WUX9 453 aaPredicted RBP23.89■■□□□ 1.41
NACA-221ENST00000552540 KIF27Q86VH2 1401 aa23.87■■□□□ 1.41
NACA-221ENST00000552540 SYNJ2O15056 1496 aa23.84■■□□□ 1.41
NACA-221ENST00000552540 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
NACA-221ENST00000552540 ADAMTS12P58397 1594 aa23.8■■□□□ 1.4
NACA-221ENST00000552540 RUSC2Q8N2Y8 1516 aa23.77■■□□□ 1.4
NACA-221ENST00000552540 FHAD1B1AJZ9 1412 aa23.76■■□□□ 1.39
NACA-221ENST00000552540 IGF1RP08069 1367 aa23.76■■□□□ 1.39
NACA-221ENST00000552540 GRIN2AQ12879 1464 aa23.71■■□□□ 1.39
NACA-221ENST00000552540 CUL7Q14999 1698 aa23.67■■□□□ 1.38
NACA-221ENST00000552540 CARMIL1Q5VZK9 1371 aa23.64■■□□□ 1.37
NACA-221ENST00000552540 CLASP1Q7Z460 1538 aa23.61■■□□□ 1.37
NACA-221ENST00000552540 CEP170Q5SW79 1584 aa23.61■■□□□ 1.37
NACA-221ENST00000552540 FAM9AQ8IZU1 332 aaPredicted RBP23.58■■□□□ 1.37
NACA-221ENST00000552540 NUP160Q12769 1436 aa23.57■■□□□ 1.36
NACA-221ENST00000552540 RIMBP3CA6NJZ7 1639 aa23.51■■□□□ 1.35
NACA-221ENST00000552540 RIMBP3BA6NNM3 1639 aa23.51■■□□□ 1.35
NACA-221ENST00000552540 RIMBP3Q9UFD9 1639 aa23.51■■□□□ 1.35
NACA-221ENST00000552540 ARHGEF11O15085 1522 aa23.51■■□□□ 1.35
NACA-221ENST00000552540 CSRNP3Q8WYN3 585 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms