RNA–Protein interactions for RNA: ENST00000595118.5

LTBP4-212, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 2

Gene LTBP4, Length 2,446 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-212ENST00000595118 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
LTBP4-212ENST00000595118 CCDC180Q9P1Z9 1646 aa31.45■■■□□ 2.63
LTBP4-212ENST00000595118 SHROOM4Q9ULL8 1493 aa31.24■■■□□ 2.59
LTBP4-212ENST00000595118 ZCCHC6Q5VYS8 1495 aaKnown RBP31.1■■■□□ 2.57
LTBP4-212ENST00000595118 DCAF8L2P0C7V8 631 aa30.62■■■□□ 2.49
LTBP4-212ENST00000595118 SUPT5HO00267 1087 aaKnown RBP30.54■■■□□ 2.48
LTBP4-212ENST00000595118 DCAF1Q9Y4B6 1507 aa30.19■■■□□ 2.42
LTBP4-212ENST00000595118 ABCC9O60706 1549 aa29.78■■■□□ 2.36
LTBP4-212ENST00000595118 CHIC1Q5VXU3 224 aa29.56■■■□□ 2.32
LTBP4-212ENST00000595118 MYO15BQ96JP2 1530 aa29.51■■■□□ 2.31
LTBP4-212ENST00000595118 SCRIBQ14160 1630 aa29.41■■■□□ 2.3
LTBP4-212ENST00000595118 NACADO15069 1562 aa29.21■■■□□ 2.27
LTBP4-212ENST00000595118 RSF1Q96T23 1441 aaPredicted RBP29.04■■■□□ 2.24
LTBP4-212ENST00000595118 RB1CC1Q8TDY2 1594 aa28.89■■■□□ 2.21
LTBP4-212ENST00000595118 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
LTBP4-212ENST00000595118 LOC105371045A0A1W2PR82 267 aa28.68■■■□□ 2.18
LTBP4-212ENST00000595118 MROH2BQ7Z745 1585 aa28.61■■■□□ 2.17
LTBP4-212ENST00000595118 TRIM41Q8WV44 630 aa28.47■■■□□ 2.15
LTBP4-212ENST00000595118 UNC13AQ9UPW8 1703 aa28.46■■■□□ 2.15
LTBP4-212ENST00000595118 WIZO95785 1651 aa28.44■■■□□ 2.14
LTBP4-212ENST00000595118 PCGF6Q9BYE7 350 aa28.43■■■□□ 2.14
LTBP4-212ENST00000595118 BAZ1AQ9NRL2 1556 aaPredicted RBP28.3■■■□□ 2.12
LTBP4-212ENST00000595118 HRCP23327 699 aa28.26■■■□□ 2.11
LTBP4-212ENST00000595118 FAM9AQ8IZU1 332 aaPredicted RBP28.23■■■□□ 2.11
LTBP4-212ENST00000595118 PABPN1Q86U42 306 aaKnown RBP eCLIP28.1■■■□□ 2.09
LTBP4-212ENST00000595118 BICRAQ9NZM4 1560 aa28.1■■■□□ 2.09
LTBP4-212ENST00000595118 SMARCA4P51532 1647 aa28.08■■■□□ 2.09
LTBP4-212ENST00000595118 TOP2AP11388 1531 aaKnown RBP28■■■□□ 2.07
LTBP4-212ENST00000595118 EHMT2Q96KQ7 1210 aa28■■■□□ 2.07
LTBP4-212ENST00000595118 EIF4G1Q04637 1599 aaKnown RBP27.94■■■□□ 2.06
LTBP4-212ENST00000595118 TRIM26Q12899 539 aaPredicted RBP27.94■■■□□ 2.06
LTBP4-212ENST00000595118 CCDC88BA6NC98 1476 aa27.88■■■□□ 2.05
LTBP4-212ENST00000595118 SMARCA2P51531 1590 aa27.84■■■□□ 2.05
LTBP4-212ENST00000595118 ABCC8Q09428 1581 aa27.73■■■□□ 2.03
LTBP4-212ENST00000595118 PPARGC1BQ86YN6 1023 aaKnown RBP27.71■■■□□ 2.03
LTBP4-212ENST00000595118 PEG3Q9GZU2 1588 aa27.54■■■□□ 2
LTBP4-212ENST00000595118 SOGA1O94964 1423 aa27.43■■□□□ 1.98
LTBP4-212ENST00000595118 ATAD2BQ9ULI0 1458 aa27.42■■□□□ 1.98
LTBP4-212ENST00000595118 BAZ1BQ9UIG0 1483 aaKnown RBP27.35■■□□□ 1.97
LTBP4-212ENST00000595118 WRNQ14191 1432 aaPredicted RBP eCLIP27.3■■□□□ 1.96
LTBP4-212ENST00000595118 RUSC2Q8N2Y8 1516 aa27.3■■□□□ 1.96
LTBP4-212ENST00000595118 CSRNP3Q8WYN3 585 aa27.26■■□□□ 1.95
LTBP4-212ENST00000595118 EEA1Q15075 1411 aa27.26■■□□□ 1.95
LTBP4-212ENST00000595118 ZEB1P37275 1124 aaPredicted RBP27.22■■□□□ 1.95
LTBP4-212ENST00000595118 CEP162Q5TB80 1403 aa27.2■■□□□ 1.95
LTBP4-212ENST00000595118 TNIKQ9UKE5 1360 aa27.17■■□□□ 1.94
LTBP4-212ENST00000595118 SYNJ1O43426 1573 aa27.16■■□□□ 1.94
LTBP4-212ENST00000595118 UBTFP17480 764 aaKnown RBP27.16■■□□□ 1.94
LTBP4-212ENST00000595118 GOLGA3Q08378 1498 aa27.07■■□□□ 1.92
LTBP4-212ENST00000595118 TTBK1Q5TCY1 1321 aaPredicted RBP27.04■■□□□ 1.92
LTBP4-212ENST00000595118 NCAPD3P42695 1498 aa26.99■■□□□ 1.91
LTBP4-212ENST00000595118 HMGXB3Q12766 1538 aa26.97■■□□□ 1.91
LTBP4-212ENST00000595118 CEP164Q9UPV0 1460 aa26.94■■□□□ 1.9
LTBP4-212ENST00000595118 CC2D2AQ9P2K1 1620 aa26.9■■□□□ 1.9
LTBP4-212ENST00000595118 KIF21BO75037 1637 aa26.88■■□□□ 1.89
LTBP4-212ENST00000595118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.88■■□□□ 1.89
LTBP4-212ENST00000595118 TOP2BQ02880 1626 aa26.85■■□□□ 1.89
LTBP4-212ENST00000595118 CCER1Q8TC90 406 aaPredicted RBP26.8■■□□□ 1.88
LTBP4-212ENST00000595118 RAPGEF2Q9Y4G8 1499 aa26.78■■□□□ 1.88
LTBP4-212ENST00000595118 CLIP1P30622 1438 aa26.76■■□□□ 1.87
LTBP4-212ENST00000595118 BIVM-ERCC5R4GMW8 1640 aa26.75■■□□□ 1.87
LTBP4-212ENST00000595118 RANGAP1P46060 587 aaPredicted RBP26.69■■□□□ 1.86
LTBP4-212ENST00000595118 CFTRP13569 1480 aa26.65■■□□□ 1.86
LTBP4-212ENST00000595118 CUX1P39880 1505 aa26.65■■□□□ 1.86
LTBP4-212ENST00000595118 VPS8Q8N3P4 1428 aa26.6■■□□□ 1.85
LTBP4-212ENST00000595118 PRXQ9BXM0 1461 aa26.53■■□□□ 1.84
LTBP4-212ENST00000595118 APLP2Q06481 763 aa26.5■■□□□ 1.83
LTBP4-212ENST00000595118 ERICH3Q5RHP9 1530 aa26.5■■□□□ 1.83
LTBP4-212ENST00000595118 KIF27Q86VH2 1401 aa26.49■■□□□ 1.83
LTBP4-212ENST00000595118 HNRNPUL2Q1KMD3 747 aaKnown RBP26.41■■□□□ 1.82
LTBP4-212ENST00000595118 CADPSQ9ULU8 1353 aa26.4■■□□□ 1.82
LTBP4-212ENST00000595118 DNAJC5BQ9UF47 199 aa26.4■■□□□ 1.82
LTBP4-212ENST00000595118 PRDM2Q13029 1718 aa26.39■■□□□ 1.82
LTBP4-212ENST00000595118 ARAP1Q96P48 1450 aa26.34■■□□□ 1.81
LTBP4-212ENST00000595118 CUX2O14529 1486 aa26.28■■□□□ 1.8
LTBP4-212ENST00000595118 FGD5Q6ZNL6 1462 aa26.22■■□□□ 1.79
LTBP4-212ENST00000595118 IGF1RP08069 1367 aa26.21■■□□□ 1.79
LTBP4-212ENST00000595118 KANK4Q5T7N3 995 aaPredicted RBP26.18■■□□□ 1.78
LTBP4-212ENST00000595118 ARHGAP35Q9NRY4 1499 aa26.16■■□□□ 1.78
LTBP4-212ENST00000595118 FANCD2Q9BXW9 1451 aa26.15■■□□□ 1.78
LTBP4-212ENST00000595118 DIEXFQ68CQ4 756 aaKnown RBP26.13■■□□□ 1.77
LTBP4-212ENST00000595118 NESP48681 1621 aa26.13■■□□□ 1.77
LTBP4-212ENST00000595118 CARMIL1Q5VZK9 1371 aa26.1■■□□□ 1.77
LTBP4-212ENST00000595118 ZNF316A6NFI3 1004 aaPredicted RBP26■■□□□ 1.75
LTBP4-212ENST00000595118 DNMBPQ6XZF7 1577 aa25.98■■□□□ 1.75
LTBP4-212ENST00000595118 RAD54L2Q9Y4B4 1467 aa25.98■■□□□ 1.75
LTBP4-212ENST00000595118 LAMC3Q9Y6N6 1575 aa25.97■■□□□ 1.75
LTBP4-212ENST00000595118 TOPBP1Q92547 1522 aa25.95■■□□□ 1.75
LTBP4-212ENST00000595118 RRBP1Q9P2E9 1410 aaKnown RBP25.93■■□□□ 1.74
LTBP4-212ENST00000595118 POLA1P09884 1462 aaPredicted RBP25.93■■□□□ 1.74
LTBP4-212ENST00000595118 ABCA10Q8WWZ4 1543 aa25.9■■□□□ 1.74
LTBP4-212ENST00000595118 SCAF1Q9H7N4 1312 aaKnown RBP25.87■■□□□ 1.73
LTBP4-212ENST00000595118 CCNB3Q8WWL7 1395 aa25.86■■□□□ 1.73
LTBP4-212ENST00000595118 P3H3Q8IVL6 736 aa25.85■■□□□ 1.73
LTBP4-212ENST00000595118 DHX57Q6P158 1386 aaKnown RBP25.84■■□□□ 1.73
LTBP4-212ENST00000595118 TIAM1Q13009 1591 aa25.83■■□□□ 1.73
LTBP4-212ENST00000595118 ITGAEP38570 1179 aa25.82■■□□□ 1.72
LTBP4-212ENST00000595118 KIF21AQ7Z4S6 1674 aa25.8■■□□□ 1.72
LTBP4-212ENST00000595118 URB2Q14146 1524 aaKnown RBP25.78■■□□□ 1.72
LTBP4-212ENST00000595118 MAP3K1Q13233 1512 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms