RNA–Protein interactions for RNA: ENST00000395965.7

FAM172A-201, Transcript of family with sequence similarity 172 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM172A, Length 4,312 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM172A-201ENST00000395965 MYT1Q01538 1121 aa17.37■□□□□ 0.37
FAM172A-201ENST00000395965 PELP1Q8IZL8 1130 aaKnown RBP17.36■□□□□ 0.37
FAM172A-201ENST00000395965 NISCHQ9Y2I1 1504 aa17.14■□□□□ 0.34
FAM172A-201ENST00000395965 DCAF8L2P0C7V8 631 aa16.38■□□□□ 0.21
FAM172A-201ENST00000395965 PPARGC1BQ86YN6 1023 aaKnown RBP16.35■□□□□ 0.21
FAM172A-201ENST00000395965 HRCP23327 699 aa16.32■□□□□ 0.2
FAM172A-201ENST00000395965 CENPBP07199 599 aaPredicted RBP16.28■□□□□ 0.2
FAM172A-201ENST00000395965 ERICH6Q7L0X2 663 aa16.24■□□□□ 0.19
FAM172A-201ENST00000395965 MYO15BQ96JP2 1530 aa16.14■□□□□ 0.17
FAM172A-201ENST00000395965 CCER1Q8TC90 406 aaPredicted RBP16.1■□□□□ 0.17
FAM172A-201ENST00000395965 TTBK1Q5TCY1 1321 aaPredicted RBP16.08■□□□□ 0.16
FAM172A-201ENST00000395965 SUPT5HO00267 1087 aaKnown RBP16.02■□□□□ 0.16
FAM172A-201ENST00000395965 PCGF6Q9BYE7 350 aa15.91■□□□□ 0.14
FAM172A-201ENST00000395965 ZEB1P37275 1124 aaPredicted RBP15.9■□□□□ 0.14
FAM172A-201ENST00000395965 SCAF1Q9H7N4 1312 aaKnown RBP15.87■□□□□ 0.13
FAM172A-201ENST00000395965 SHROOM4Q9ULL8 1493 aa15.58■□□□□ 0.09
FAM172A-201ENST00000395965 NEFLP07196 543 aa15.57■□□□□ 0.08
FAM172A-201ENST00000395965 YTHDC1Q96MU7 727 aaKnown RBP15.52■□□□□ 0.08
FAM172A-201ENST00000395965 CHIC1Q5VXU3 224 aa15.44■□□□□ 0.06
FAM172A-201ENST00000395965 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
FAM172A-201ENST00000395965 LOC105371045A0A1W2PR82 267 aa15.27■□□□□ 0.04
FAM172A-201ENST00000395965 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
FAM172A-201ENST00000395965 RTL5Q5HYW3 569 aaPredicted RBP15.26■□□□□ 0.03
FAM172A-201ENST00000395965 CCDC180Q9P1Z9 1646 aa15.24■□□□□ 0.03
FAM172A-201ENST00000395965 NEUROD1Q13562 356 aa15.24■□□□□ 0.03
FAM172A-201ENST00000395965 APLP2Q06481 763 aa15.22■□□□□ 0.03
FAM172A-201ENST00000395965 GTF3C3Q9Y5Q9 886 aa15.13■□□□□ 0.01
FAM172A-201ENST00000395965 DAXXQ9UER7 740 aaPredicted RBP15.12■□□□□ 0.01
FAM172A-201ENST00000395965 FAM9AQ8IZU1 332 aaPredicted RBP15.09■□□□□ 0.01
FAM172A-201ENST00000395965 ACIN1Q9UKV3 1341 aaKnown RBP15.06■□□□□ 0
FAM172A-201ENST00000395965 TRIM26Q12899 539 aaPredicted RBP15.06■□□□□ 0
FAM172A-201ENST00000395965 GLIPR1L2Q4G1C9 344 aa15.03■□□□□ -0
FAM172A-201ENST00000395965 EIF5BO60841 1220 aaKnown RBP14.98□□□□□ -0.01
FAM172A-201ENST00000395965 DIEXFQ68CQ4 756 aaKnown RBP14.9□□□□□ -0.02
FAM172A-201ENST00000395965 MYT1LQ9UL68 1186 aa14.88□□□□□ -0.03
FAM172A-201ENST00000395965 TRIM41Q8WV44 630 aa14.83□□□□□ -0.04
FAM172A-201ENST00000395965 ZNF316A6NFI3 1004 aaPredicted RBP14.76□□□□□ -0.05
FAM172A-201ENST00000395965 BCL11AQ9H165 835 aa14.72□□□□□ -0.05
FAM172A-201ENST00000395965 CDK11AQ9UQ88 783 aaPredicted RBP14.7□□□□□ -0.06
FAM172A-201ENST00000395965 ZCCHC6Q5VYS8 1495 aaKnown RBP14.7□□□□□ -0.06
FAM172A-201ENST00000395965 BCANQ96GW7 911 aa14.65□□□□□ -0.06
FAM172A-201ENST00000395965 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.62□□□□□ -0.07
FAM172A-201ENST00000395965 CLSPNQ9HAW4 1339 aa14.61□□□□□ -0.07
FAM172A-201ENST00000395965 RANGAP1P46060 587 aaPredicted RBP14.6□□□□□ -0.07
FAM172A-201ENST00000395965 UBTFP17480 764 aaKnown RBP14.6□□□□□ -0.07
FAM172A-201ENST00000395965 ANP32EQ9BTT0 268 aa14.59□□□□□ -0.07
FAM172A-201ENST00000395965 ANP32AP39687 249 aaKnown RBP14.5□□□□□ -0.09
FAM172A-201ENST00000395965 ATP1B4Q9UN42 357 aaPredicted RBP14.45□□□□□ -0.1
FAM172A-201ENST00000395965 PRKCSHP14314 528 aaPredicted RBP14.43□□□□□ -0.1
FAM172A-201ENST00000395965 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
FAM172A-201ENST00000395965 MIER1Q8N108 512 aa14.37□□□□□ -0.11
FAM172A-201ENST00000395965 TSHZ2Q9NRE2 1034 aa14.34□□□□□ -0.11
FAM172A-201ENST00000395965 NBR1Q14596 966 aa14.32□□□□□ -0.12
FAM172A-201ENST00000395965 SUPT16HQ9Y5B9 1047 aaKnown RBP14.26□□□□□ -0.13
FAM172A-201ENST00000395965 FKBP8Q14318 412 aa14.25□□□□□ -0.13
FAM172A-201ENST00000395965 ANP32BQ92688 251 aaKnown RBP14.24□□□□□ -0.13
FAM172A-201ENST00000395965 TNNT2P45379 298 aaPredicted RBP14.23□□□□□ -0.13
FAM172A-201ENST00000395965 ZBTB47Q9UFB7 747 aaPredicted RBP14.23□□□□□ -0.13
FAM172A-201ENST00000395965 HNRNPUL2Q1KMD3 747 aaKnown RBP14.22□□□□□ -0.13
FAM172A-201ENST00000395965 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
FAM172A-201ENST00000395965 NPM2Q86SE8 214 aaKnown RBP14.18□□□□□ -0.14
FAM172A-201ENST00000395965 ERICH6BQ5W0A0 696 aa14.17□□□□□ -0.14
FAM172A-201ENST00000395965 ITGAEP38570 1179 aa14.17□□□□□ -0.14
FAM172A-201ENST00000395965 ANP32CO43423 234 aa14.15□□□□□ -0.14
FAM172A-201ENST00000395965 POLR3GLQ9BT43 218 aa14.13□□□□□ -0.15
FAM172A-201ENST00000395965 RTN4Q9NQC3 1192 aaKnown RBP14.11□□□□□ -0.15
FAM172A-201ENST00000395965 ABCC9O60706 1549 aa14.07□□□□□ -0.16
FAM172A-201ENST00000395965 MSH5O43196 834 aa14.07□□□□□ -0.16
FAM172A-201ENST00000395965 CDK11BP21127 795 aaKnown RBP14.06□□□□□ -0.16
FAM172A-201ENST00000395965 CNGB1Q14028 1251 aaPredicted RBP14.06□□□□□ -0.16
FAM172A-201ENST00000395965 NEFMP07197 916 aa14.05□□□□□ -0.16
FAM172A-201ENST00000395965 NCLP19338 710 aaKnown RBP14.04□□□□□ -0.16
FAM172A-201ENST00000395965 DEKP35659 375 aaKnown RBP14.02□□□□□ -0.16
FAM172A-201ENST00000395965 KCNH8Q96L42 1107 aa14.02□□□□□ -0.16
FAM172A-201ENST00000395965 NAP1L5Q96NT1 182 aaPredicted RBP14□□□□□ -0.17
FAM172A-201ENST00000395965 RSF1Q96T23 1441 aaPredicted RBP14□□□□□ -0.17
FAM172A-201ENST00000395965 TRIM44Q96DX7 344 aaPredicted RBP13.99□□□□□ -0.17
FAM172A-201ENST00000395965 SLC24A1O60721 1099 aa13.98□□□□□ -0.17
FAM172A-201ENST00000395965 ARXQ96QS3 562 aa13.92□□□□□ -0.18
FAM172A-201ENST00000395965 PPM1GO15355 546 aaPredicted RBP13.92□□□□□ -0.18
FAM172A-201ENST00000395965 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.91□□□□□ -0.18
FAM172A-201ENST00000395965 ANO8Q9HCE9 1232 aaPredicted RBP13.89□□□□□ -0.19
FAM172A-201ENST00000395965 CCDC136Q96JN2 1154 aa13.87□□□□□ -0.19
FAM172A-201ENST00000395965 UPF2Q9HAU5 1272 aaKnown RBP13.86□□□□□ -0.19
FAM172A-201ENST00000395965 EIF4G1Q04637 1599 aaKnown RBP13.86□□□□□ -0.19
FAM172A-201ENST00000395965 WRNQ14191 1432 aaPredicted RBP eCLIP13.86□□□□□ -0.19
FAM172A-201ENST00000395965 RBM19Q9Y4C8 960 aaKnown RBP13.86□□□□□ -0.19
FAM172A-201ENST00000395965 NOP58Q9Y2X3 529 aaKnown RBP13.84□□□□□ -0.19
FAM172A-201ENST00000395965 HSP90AA1P07900 732 aaKnown RBP13.83□□□□□ -0.19
FAM172A-201ENST00000395965 DDRGK1Q96HY6 314 aa13.83□□□□□ -0.2
FAM172A-201ENST00000395965 HNRNPUQ00839 825 aaKnown RBP eCLIP13.81□□□□□ -0.2
FAM172A-201ENST00000395965 VSIG10Q8N0Z9 540 aa13.79□□□□□ -0.2
FAM172A-201ENST00000395965 ABCC8Q09428 1581 aa13.77□□□□□ -0.21
FAM172A-201ENST00000395965 FAM50AQ14320 339 aaKnown RBP13.76□□□□□ -0.21
FAM172A-201ENST00000395965 PODXL2Q9NZ53 605 aa13.76□□□□□ -0.21
FAM172A-201ENST00000395965 CEP162Q5TB80 1403 aa13.76□□□□□ -0.21
FAM172A-201ENST00000395965 PKNOX2Q96KN3 472 aa13.74□□□□□ -0.21
FAM172A-201ENST00000395965 AMER1Q5JTC6 1135 aaPredicted RBP13.73□□□□□ -0.21
FAM172A-201ENST00000395965 TRIM52Q96A61 297 aa13.73□□□□□ -0.21
FAM172A-201ENST00000395965 CANXP27824 592 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms