RNA–Protein interactions for RNA: ENST00000560240.5

COPS2-207, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-207ENST00000560240 NISCHQ9Y2I1 1504 aa19.15■□□□□ 0.66
COPS2-207ENST00000560240 CCDC180Q9P1Z9 1646 aa16.99■□□□□ 0.31
COPS2-207ENST00000560240 ABCC9O60706 1549 aa16.31■□□□□ 0.2
COPS2-207ENST00000560240 ZCCHC6Q5VYS8 1495 aaKnown RBP16.01■□□□□ 0.15
COPS2-207ENST00000560240 MYO15BQ96JP2 1530 aa15.96■□□□□ 0.15
COPS2-207ENST00000560240 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
COPS2-207ENST00000560240 NACADO15069 1562 aa15.92■□□□□ 0.14
COPS2-207ENST00000560240 RB1CC1Q8TDY2 1594 aa15.86■□□□□ 0.13
COPS2-207ENST00000560240 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
COPS2-207ENST00000560240 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.07
COPS2-207ENST00000560240 SCRIBQ14160 1630 aa15.4■□□□□ 0.06
COPS2-207ENST00000560240 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
COPS2-207ENST00000560240 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.04
COPS2-207ENST00000560240 PABPN1Q86U42 306 aaKnown RBP eCLIP15.24■□□□□ 0.03
COPS2-207ENST00000560240 EIF4G1Q04637 1599 aaKnown RBP14.94□□□□□ -0.02
COPS2-207ENST00000560240 BAZ1AQ9NRL2 1556 aaPredicted RBP14.85□□□□□ -0.03
COPS2-207ENST00000560240 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
COPS2-207ENST00000560240 SMARCA4P51532 1647 aa14.81□□□□□ -0.04
COPS2-207ENST00000560240 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
COPS2-207ENST00000560240 DNAJC5BQ9UF47 199 aa14.78□□□□□ -0.04
COPS2-207ENST00000560240 PEG3Q9GZU2 1588 aa14.73□□□□□ -0.05
COPS2-207ENST00000560240 MROH2BQ7Z745 1585 aa14.73□□□□□ -0.05
COPS2-207ENST00000560240 SMARCA2P51531 1590 aa14.7□□□□□ -0.06
COPS2-207ENST00000560240 NCAPD3P42695 1498 aa14.69□□□□□ -0.06
COPS2-207ENST00000560240 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
COPS2-207ENST00000560240 RSF1Q96T23 1441 aaPredicted RBP14.65□□□□□ -0.06
COPS2-207ENST00000560240 HMGXB3Q12766 1538 aa14.64□□□□□ -0.07
COPS2-207ENST00000560240 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
COPS2-207ENST00000560240 WIZO95785 1651 aa14.56□□□□□ -0.08
COPS2-207ENST00000560240 TOP2AP11388 1531 aaKnown RBP14.47□□□□□ -0.09
COPS2-207ENST00000560240 SUPT5HO00267 1087 aaKnown RBP14.3□□□□□ -0.12
COPS2-207ENST00000560240 CCDC88BA6NC98 1476 aa14.27□□□□□ -0.12
COPS2-207ENST00000560240 LAMC3Q9Y6N6 1575 aa14.26□□□□□ -0.13
COPS2-207ENST00000560240 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
COPS2-207ENST00000560240 CFTRP13569 1480 aa14.21□□□□□ -0.13
COPS2-207ENST00000560240 NESP48681 1621 aa14.18□□□□□ -0.14
COPS2-207ENST00000560240 PDS5BQ9NTI5 1447 aa14.15□□□□□ -0.14
COPS2-207ENST00000560240 PRDM2Q13029 1718 aa14.11□□□□□ -0.15
COPS2-207ENST00000560240 ERCC6Q03468 1493 aa14.06□□□□□ -0.16
COPS2-207ENST00000560240 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
COPS2-207ENST00000560240 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
COPS2-207ENST00000560240 CEP164Q9UPV0 1460 aa14.02□□□□□ -0.16
COPS2-207ENST00000560240 THOC2Q8NI27 1593 aaKnown RBP13.98□□□□□ -0.17
COPS2-207ENST00000560240 MRC2Q9UBG0 1479 aa13.97□□□□□ -0.17
COPS2-207ENST00000560240 WDR62O43379 1518 aa13.94□□□□□ -0.18
COPS2-207ENST00000560240 ABCC8Q09428 1581 aa13.92□□□□□ -0.18
COPS2-207ENST00000560240 CUX2O14529 1486 aa13.92□□□□□ -0.18
COPS2-207ENST00000560240 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.19
COPS2-207ENST00000560240 DNMBPQ6XZF7 1577 aa13.87□□□□□ -0.19
COPS2-207ENST00000560240 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
COPS2-207ENST00000560240 CUX1P39880 1505 aa13.81□□□□□ -0.2
COPS2-207ENST00000560240 WRNQ14191 1432 aaPredicted RBP eCLIP13.81□□□□□ -0.2
COPS2-207ENST00000560240 TOP2BQ02880 1626 aa13.78□□□□□ -0.2
COPS2-207ENST00000560240 BIVM-ERCC5R4GMW8 1640 aa13.77□□□□□ -0.21
COPS2-207ENST00000560240 POLA1P09884 1462 aaPredicted RBP13.75□□□□□ -0.21
COPS2-207ENST00000560240 SYNJ1O43426 1573 aa13.75□□□□□ -0.21
COPS2-207ENST00000560240 IFT140Q96RY7 1462 aa13.74□□□□□ -0.21
COPS2-207ENST00000560240 FGD5Q6ZNL6 1462 aa13.73□□□□□ -0.21
COPS2-207ENST00000560240 TARBP1Q13395 1621 aaKnown RBP13.71□□□□□ -0.22
COPS2-207ENST00000560240 SOGA1O94964 1423 aa13.69□□□□□ -0.22
COPS2-207ENST00000560240 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
COPS2-207ENST00000560240 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
COPS2-207ENST00000560240 RAD54L2Q9Y4B4 1467 aa13.64□□□□□ -0.23
COPS2-207ENST00000560240 ZNF608Q9ULD9 1512 aaPredicted RBP13.6□□□□□ -0.23
COPS2-207ENST00000560240 EIF4G3O43432 1585 aaKnown RBP13.59□□□□□ -0.23
COPS2-207ENST00000560240 ABCA5Q8WWZ7 1642 aa13.57□□□□□ -0.24
COPS2-207ENST00000560240 TRIM41Q8WV44 630 aa13.56□□□□□ -0.24
COPS2-207ENST00000560240 TDRD9Q8NDG6 1382 aaKnown RBP13.55□□□□□ -0.24
COPS2-207ENST00000560240 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.241e-7■■■■■ 40.7
COPS2-207ENST00000560240 GAPVD1Q14C86 1478 aa13.54□□□□□ -0.24
COPS2-207ENST00000560240 GRIN2BQ13224 1484 aa13.53□□□□□ -0.24
COPS2-207ENST00000560240 CHIC1Q5VXU3 224 aa13.52□□□□□ -0.25
COPS2-207ENST00000560240 KIF27Q86VH2 1401 aa13.51□□□□□ -0.25
COPS2-207ENST00000560240 ERICH3Q5RHP9 1530 aa13.5□□□□□ -0.25
COPS2-207ENST00000560240 MAGI1Q96QZ7 1491 aaPredicted RBP13.49□□□□□ -0.25
COPS2-207ENST00000560240 PBRM1Q86U86 1689 aa13.49□□□□□ -0.25
COPS2-207ENST00000560240 SNAPC4Q5SXM2 1469 aa13.44□□□□□ -0.26
COPS2-207ENST00000560240 EEA1Q15075 1411 aa13.43□□□□□ -0.26
COPS2-207ENST00000560240 IGF1RP08069 1367 aa13.43□□□□□ -0.26
COPS2-207ENST00000560240 SYNJ2O15056 1496 aa13.42□□□□□ -0.26
COPS2-207ENST00000560240 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
COPS2-207ENST00000560240 CUL7Q14999 1698 aa13.41□□□□□ -0.26
COPS2-207ENST00000560240 FHAD1B1AJZ9 1412 aa13.41□□□□□ -0.26
COPS2-207ENST00000560240 RUSC2Q8N2Y8 1516 aa13.38□□□□□ -0.27
COPS2-207ENST00000560240 CHD1O14646 1710 aa13.36□□□□□ -0.27
COPS2-207ENST00000560240 GRIN2AQ12879 1464 aa13.36□□□□□ -0.27
COPS2-207ENST00000560240 CHMP7Q8WUX9 453 aaPredicted RBP13.34□□□□□ -0.27
COPS2-207ENST00000560240 CARMIL1Q5VZK9 1371 aa13.33□□□□□ -0.27
COPS2-207ENST00000560240 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
COPS2-207ENST00000560240 PRXQ9BXM0 1461 aa13.32□□□□□ -0.28
COPS2-207ENST00000560240 CSRNP3Q8WYN3 585 aa13.31□□□□□ -0.28
COPS2-207ENST00000560240 NUP160Q12769 1436 aa13.3□□□□□ -0.28
COPS2-207ENST00000560240 RAPGEF2Q9Y4G8 1499 aa13.29□□□□□ -0.28
COPS2-207ENST00000560240 FBLN2P98095 1184 aa13.29□□□□□ -0.28
COPS2-207ENST00000560240 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.29
COPS2-207ENST00000560240 CEP170Q5SW79 1584 aa13.26□□□□□ -0.29
COPS2-207ENST00000560240 KIF21BO75037 1637 aa13.24□□□□□ -0.29
COPS2-207ENST00000560240 DNAJC5Q9H3Z4 198 aa13.22□□□□□ -0.29
COPS2-207ENST00000560240 KIAA0586Q9BVV6 1533 aa13.22□□□□□ -0.29
COPS2-207ENST00000560240 SHROOM2Q13796 1616 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 274.9 ms