RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, humanhuman

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-222ENST00000543695 NISCHQ9Y2I1 1504 aa24.99■■□□□ 1.59
LDHA-222ENST00000543695 ABCC9O60706 1549 aa22.26■■□□□ 1.15
LDHA-222ENST00000543695 CCDC180Q9P1Z9 1646 aa22.26■■□□□ 1.15
LDHA-222ENST00000543695 DCAF8L2P0C7V8 631 aa21.22■□□□□ 0.99
LDHA-222ENST00000543695 RB1CC1Q8TDY2 1594 aa21.22■□□□□ 0.99
LDHA-222ENST00000543695 NACADO15069 1562 aa21.11■□□□□ 0.97
LDHA-222ENST00000543695 MYO15BQ96JP2 1530 aa20.88■□□□□ 0.93
LDHA-222ENST00000543695 PABPN1Q86U42 306 aaKnown RBP eCLIP20.84■□□□□ 0.93
LDHA-222ENST00000543695 DNAJC5BQ9UF47 199 aa20.83■□□□□ 0.93
LDHA-222ENST00000543695 AEBP2Q6ZN18 517 aaPredicted RBP20.78■□□□□ 0.92
LDHA-222ENST00000543695 ZCCHC6Q5VYS8 1495 aaKnown RBP20.7■□□□□ 0.9
LDHA-222ENST00000543695 DCAF1Q9Y4B6 1507 aa20.64■□□□□ 0.9
LDHA-222ENST00000543695 UNC13AQ9UPW8 1703 aa20.56■□□□□ 0.88
LDHA-222ENST00000543695 BICRAQ9NZM4 1560 aa20.54■□□□□ 0.88
LDHA-222ENST00000543695 SHROOM4Q9ULL8 1493 aa20.34■□□□□ 0.85
LDHA-222ENST00000543695 SCRIBQ14160 1630 aa20.33■□□□□ 0.84
LDHA-222ENST00000543695 EIF4G1Q04637 1599 aaKnown RBP20.06■□□□□ 0.8
LDHA-222ENST00000543695 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
LDHA-222ENST00000543695 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
LDHA-222ENST00000543695 SUPT5HO00267 1087 aaKnown RBP19.56■□□□□ 0.72
LDHA-222ENST00000543695 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
LDHA-222ENST00000543695 ATAD2BQ9ULI0 1458 aa19.48■□□□□ 0.71
LDHA-222ENST00000543695 SMARCA4P51532 1647 aa19.41■□□□□ 0.7
LDHA-222ENST00000543695 SMARCA2P51531 1590 aa19.4■□□□□ 0.7
LDHA-222ENST00000543695 CHIC1Q5VXU3 224 aa19.39■□□□□ 0.69
LDHA-222ENST00000543695 BAZ1AQ9NRL2 1556 aaPredicted RBP19.39■□□□□ 0.69
LDHA-222ENST00000543695 HMGXB3Q12766 1538 aa19.33■□□□□ 0.68
LDHA-222ENST00000543695 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
LDHA-222ENST00000543695 ERCC6Q03468 1493 aa19.25■□□□□ 0.67
LDHA-222ENST00000543695 MROH2BQ7Z745 1585 aa19.24■□□□□ 0.67
LDHA-222ENST00000543695 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
LDHA-222ENST00000543695 CUX2O14529 1486 aa19.14■□□□□ 0.65
LDHA-222ENST00000543695 NESP48681 1621 aa19.14■□□□□ 0.65
LDHA-222ENST00000543695 RSF1Q96T23 1441 aaPredicted RBP19.08■□□□□ 0.65
LDHA-222ENST00000543695 DNAJC5Q9H3Z4 198 aa19.08■□□□□ 0.64
LDHA-222ENST00000543695 LAMC3Q9Y6N6 1575 aa19.02■□□□□ 0.63
LDHA-222ENST00000543695 PDS5BQ9NTI5 1447 aa19■□□□□ 0.63
LDHA-222ENST00000543695 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
LDHA-222ENST00000543695 WIZO95785 1651 aa18.97■□□□□ 0.63
LDHA-222ENST00000543695 THOC2Q8NI27 1593 aaKnown RBP18.83■□□□□ 0.6
LDHA-222ENST00000543695 KIF21AQ7Z4S6 1674 aa18.79■□□□□ 0.6
LDHA-222ENST00000543695 TOP2AP11388 1531 aaKnown RBP18.77■□□□□ 0.6
LDHA-222ENST00000543695 MRC2Q9UBG0 1479 aa18.76■□□□□ 0.59
LDHA-222ENST00000543695 CFTRP13569 1480 aa18.75■□□□□ 0.59
LDHA-222ENST00000543695 FANCD2Q9BXW9 1451 aa18.72■□□□□ 0.59
LDHA-222ENST00000543695 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
LDHA-222ENST00000543695 WDR62O43379 1518 aa18.66■□□□□ 0.58
LDHA-222ENST00000543695 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
LDHA-222ENST00000543695 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.56
LDHA-222ENST00000543695 OSCARQ8IYS5 282 aa18.42■□□□□ 0.54
LDHA-222ENST00000543695 TRIM41Q8WV44 630 aa18.39■□□□□ 0.53
LDHA-222ENST00000543695 ABCC8Q09428 1581 aa18.38■□□□□ 0.53
LDHA-222ENST00000543695 PRDM2Q13029 1718 aa18.37■□□□□ 0.53
LDHA-222ENST00000543695 IFT140Q96RY7 1462 aa18.36■□□□□ 0.53
LDHA-222ENST00000543695 TOPBP1Q92547 1522 aa18.35■□□□□ 0.53
LDHA-222ENST00000543695 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
LDHA-222ENST00000543695 DNMBPQ6XZF7 1577 aa18.26■□□□□ 0.51
LDHA-222ENST00000543695 LOC105371045A0A1W2PR82 267 aa18.26■□□□□ 0.51
LDHA-222ENST00000543695 AQRO60306 1485 aaKnown RBP eCLIP18.18■□□□□ 0.52e-8■■■■□ 21.2
LDHA-222ENST00000543695 POLA1P09884 1462 aaPredicted RBP18.18■□□□□ 0.5
LDHA-222ENST00000543695 SOGA1O94964 1423 aa18.16■□□□□ 0.5
LDHA-222ENST00000543695 FBLN2P98095 1184 aa18.13■□□□□ 0.49
LDHA-222ENST00000543695 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
LDHA-222ENST00000543695 TARBP1Q13395 1621 aaKnown RBP18.12■□□□□ 0.49
LDHA-222ENST00000543695 TDRD9Q8NDG6 1382 aaKnown RBP18.12■□□□□ 0.49
LDHA-222ENST00000543695 EIF4G3O43432 1585 aaKnown RBP18.11■□□□□ 0.49
LDHA-222ENST00000543695 FGD5Q6ZNL6 1462 aa18.08■□□□□ 0.49
LDHA-222ENST00000543695 CUX1P39880 1505 aa18.06■□□□□ 0.48
LDHA-222ENST00000543695 FAM9AQ8IZU1 332 aaPredicted RBP18.03■□□□□ 0.48
LDHA-222ENST00000543695 CHMP7Q8WUX9 453 aaPredicted RBP18.02■□□□□ 0.48
LDHA-222ENST00000543695 EEA1Q15075 1411 aa18■□□□□ 0.47
LDHA-222ENST00000543695 WDR97A6NE52 1622 aa17.97■□□□□ 0.47
LDHA-222ENST00000543695 ARHGEF11O15085 1522 aa17.97■□□□□ 0.47
LDHA-222ENST00000543695 GRIN2BQ13224 1484 aa17.96■□□□□ 0.47
LDHA-222ENST00000543695 CYB5RLQ6IPT4 315 aa17.96■□□□□ 0.47
LDHA-222ENST00000543695 RIMBP3CA6NJZ7 1639 aa17.96■□□□□ 0.47
LDHA-222ENST00000543695 RIMBP3BA6NNM3 1639 aa17.96■□□□□ 0.47
LDHA-222ENST00000543695 RIMBP3Q9UFD9 1639 aa17.96■□□□□ 0.47
LDHA-222ENST00000543695 SNAPC4Q5SXM2 1469 aa17.95■□□□□ 0.46
LDHA-222ENST00000543695 WRNQ14191 1432 aaPredicted RBP eCLIP17.95■□□□□ 0.46
LDHA-222ENST00000543695 SYNJ1O43426 1573 aa17.93■□□□□ 0.46
LDHA-222ENST00000543695 MAGI1Q96QZ7 1491 aaPredicted RBP17.93■□□□□ 0.46
LDHA-222ENST00000543695 PCGF6Q9BYE7 350 aa17.92■□□□□ 0.46
LDHA-222ENST00000543695 GAPVD1Q14C86 1478 aa17.92■□□□□ 0.46
LDHA-222ENST00000543695 CHD1O14646 1710 aa17.91■□□□□ 0.46
LDHA-222ENST00000543695 ABCA10Q8WWZ4 1543 aa17.89■□□□□ 0.45
LDHA-222ENST00000543695 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
LDHA-222ENST00000543695 BIVM-ERCC5R4GMW8 1640 aa17.87■□□□□ 0.45
LDHA-222ENST00000543695 HRCP23327 699 aa17.87■□□□□ 0.45
LDHA-222ENST00000543695 TRIM26Q12899 539 aaPredicted RBP17.87■□□□□ 0.45
LDHA-222ENST00000543695 TOP2BQ02880 1626 aa17.85■□□□□ 0.45
LDHA-222ENST00000543695 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
LDHA-222ENST00000543695 KIF21BO75037 1637 aa17.8■□□□□ 0.44
LDHA-222ENST00000543695 ARAP1Q96P48 1450 aa17.79■□□□□ 0.44
LDHA-222ENST00000543695 CLASP1Q7Z460 1538 aa17.77■□□□□ 0.44
LDHA-222ENST00000543695 RUSC2Q8N2Y8 1516 aa17.77■□□□□ 0.44
LDHA-222ENST00000543695 ABCA5Q8WWZ7 1642 aa17.77■□□□□ 0.44
LDHA-222ENST00000543695 TNIKQ9UKE5 1360 aa17.77■□□□□ 0.43
LDHA-222ENST00000543695 GOLGA3Q08378 1498 aa17.76■□□□□ 0.43
LDHA-222ENST00000543695 CSRNP3Q8WYN3 585 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms