Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.21■■□□□ 1.15
PPP1R3EQ9H7J1 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.21■■□□□ 1.15
PPP1R3EQ9H7J1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP1R3EQ9H7J1 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP1R3EQ9H7J1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP1R3EQ9H7J1 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PPP1R3EQ9H7J1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.21■■□□□ 1.15
PPP1R3EQ9H7J1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPP1R3EQ9H7J1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PPP1R3EQ9H7J1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC22.2■■□□□ 1.14
PPP1R3EQ9H7J1 AL162393.1-201ENST00000437852 946 ntBASIC22.2■■□□□ 1.14
PPP1R3EQ9H7J1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PPP1R3EQ9H7J1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PPP1R3EQ9H7J1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
PPP1R3EQ9H7J1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
PPP1R3EQ9H7J1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.19■■□□□ 1.14
PPP1R3EQ9H7J1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP1R3EQ9H7J1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PPP1R3EQ9H7J1 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPP1R3EQ9H7J1 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
PPP1R3EQ9H7J1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PPP1R3EQ9H7J1 MIR3665-201ENST00000578708 105 ntBASIC22.18■■□□□ 1.14
PPP1R3EQ9H7J1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.18■■□□□ 1.14
PPP1R3EQ9H7J1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
PPP1R3EQ9H7J1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PPP1R3EQ9H7J1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.17■■□□□ 1.14
PPP1R3EQ9H7J1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP1R3EQ9H7J1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PPP1R3EQ9H7J1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PPP1R3EQ9H7J1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.16■■□□□ 1.14
PPP1R3EQ9H7J1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.15■■□□□ 1.14
PPP1R3EQ9H7J1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PPP1R3EQ9H7J1 AP004833.2-201ENST00000532228 1454 ntBASIC22.15■■□□□ 1.14
PPP1R3EQ9H7J1 AC087741.3-201ENST00000624270 1347 ntBASIC22.14■■□□□ 1.14
PPP1R3EQ9H7J1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP1R3EQ9H7J1 AP006261.1-201ENST00000584783 668 ntBASIC22.14■■□□□ 1.13
PPP1R3EQ9H7J1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PPP1R3EQ9H7J1 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PPP1R3EQ9H7J1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP1R3EQ9H7J1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
PPP1R3EQ9H7J1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP1R3EQ9H7J1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PPP1R3EQ9H7J1 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PPP1R3EQ9H7J1 AC093323.1-202ENST00000635031 2045 ntBASIC22.13■■□□□ 1.13
PPP1R3EQ9H7J1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PPP1R3EQ9H7J1 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PPP1R3EQ9H7J1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
PPP1R3EQ9H7J1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP1R3EQ9H7J1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP1R3EQ9H7J1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.11■■□□□ 1.13
PPP1R3EQ9H7J1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
PPP1R3EQ9H7J1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PPP1R3EQ9H7J1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
PPP1R3EQ9H7J1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP1R3EQ9H7J1 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
PPP1R3EQ9H7J1 AC108673.1-201ENST00000510422 1159 ntBASIC22.1■■□□□ 1.13
PPP1R3EQ9H7J1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PPP1R3EQ9H7J1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PPP1R3EQ9H7J1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
PPP1R3EQ9H7J1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP1R3EQ9H7J1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PPP1R3EQ9H7J1 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
PPP1R3EQ9H7J1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP1R3EQ9H7J1 AC145676.1-201ENST00000514988 2004 ntBASIC22.09■■□□□ 1.13
PPP1R3EQ9H7J1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PPP1R3EQ9H7J1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
PPP1R3EQ9H7J1 AC100797.4-201ENST00000631653 1827 ntBASIC22.08■■□□□ 1.12
PPP1R3EQ9H7J1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
PPP1R3EQ9H7J1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PPP1R3EQ9H7J1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
PPP1R3EQ9H7J1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.06■■□□□ 1.12
PPP1R3EQ9H7J1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PPP1R3EQ9H7J1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
PPP1R3EQ9H7J1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPP1R3EQ9H7J1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.05■■□□□ 1.12
PPP1R3EQ9H7J1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.05■■□□□ 1.12
PPP1R3EQ9H7J1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.05■■□□□ 1.12
PPP1R3EQ9H7J1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPP1R3EQ9H7J1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.05■■□□□ 1.12
PPP1R3EQ9H7J1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PPP1R3EQ9H7J1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PPP1R3EQ9H7J1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PPP1R3EQ9H7J1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPP1R3EQ9H7J1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PPP1R3EQ9H7J1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPP1R3EQ9H7J1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
PPP1R3EQ9H7J1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.04■■□□□ 1.12
PPP1R3EQ9H7J1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PPP1R3EQ9H7J1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP1R3EQ9H7J1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PPP1R3EQ9H7J1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.03■■□□□ 1.12
PPP1R3EQ9H7J1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.03■■□□□ 1.12
PPP1R3EQ9H7J1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
PPP1R3EQ9H7J1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
PPP1R3EQ9H7J1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PPP1R3EQ9H7J1 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PPP1R3EQ9H7J1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC22.02■■□□□ 1.12
PPP1R3EQ9H7J1 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.02■■□□□ 1.12
PPP1R3EQ9H7J1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PPP1R3EQ9H7J1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms