Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 AC135983.2-203ENST00000454486 1613 ntBASIC25.63■■□□□ 1.69
CDC42EP4Q9H3Q1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDC42EP4Q9H3Q1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
CDC42EP4Q9H3Q1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
CDC42EP4Q9H3Q1 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDC42EP4Q9H3Q1 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.6■■□□□ 1.69
CDC42EP4Q9H3Q1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42EP4Q9H3Q1 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42EP4Q9H3Q1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CDC42EP4Q9H3Q1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.6■■□□□ 1.69
CDC42EP4Q9H3Q1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.6■■□□□ 1.69
CDC42EP4Q9H3Q1 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
CDC42EP4Q9H3Q1 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
CDC42EP4Q9H3Q1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDC42EP4Q9H3Q1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDC42EP4Q9H3Q1 AC145676.1-201ENST00000514988 2004 ntBASIC25.58■■□□□ 1.69
CDC42EP4Q9H3Q1 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDC42EP4Q9H3Q1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.58■■□□□ 1.69
CDC42EP4Q9H3Q1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
CDC42EP4Q9H3Q1 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.56■■□□□ 1.68
CDC42EP4Q9H3Q1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CDC42EP4Q9H3Q1 WHAMMP2-203ENST00000563942 1603 ntBASIC25.56■■□□□ 1.68
CDC42EP4Q9H3Q1 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CDC42EP4Q9H3Q1 MIR762-201ENST00000390236 83 ntBASIC25.55■■□□□ 1.68
CDC42EP4Q9H3Q1 AC097358.2-201ENST00000607541 1159 ntBASIC25.55■■□□□ 1.68
CDC42EP4Q9H3Q1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
CDC42EP4Q9H3Q1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.54■■□□□ 1.68
CDC42EP4Q9H3Q1 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.54■■□□□ 1.68
CDC42EP4Q9H3Q1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42EP4Q9H3Q1 AC020928.2-201ENST00000588717 2197 ntBASIC25.54■■□□□ 1.68
CDC42EP4Q9H3Q1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC25.54■■□□□ 1.68
CDC42EP4Q9H3Q1 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC25.54■■□□□ 1.68
CDC42EP4Q9H3Q1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42EP4Q9H3Q1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
CDC42EP4Q9H3Q1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42EP4Q9H3Q1 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.54■■□□□ 1.68
CDC42EP4Q9H3Q1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CDC42EP4Q9H3Q1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.54■■□□□ 1.68
CDC42EP4Q9H3Q1 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDC42EP4Q9H3Q1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDC42EP4Q9H3Q1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
CDC42EP4Q9H3Q1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC25.53■■□□□ 1.68
CDC42EP4Q9H3Q1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.53■■□□□ 1.68
CDC42EP4Q9H3Q1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.52■■□□□ 1.68
CDC42EP4Q9H3Q1 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42EP4Q9H3Q1 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42EP4Q9H3Q1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
CDC42EP4Q9H3Q1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.68
CDC42EP4Q9H3Q1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.51■■□□□ 1.67
CDC42EP4Q9H3Q1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.51■■□□□ 1.67
CDC42EP4Q9H3Q1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CDC42EP4Q9H3Q1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC25.51■■□□□ 1.67
CDC42EP4Q9H3Q1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42EP4Q9H3Q1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.5■■□□□ 1.67
CDC42EP4Q9H3Q1 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC25.5■■□□□ 1.67
CDC42EP4Q9H3Q1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC25.5■■□□□ 1.67
CDC42EP4Q9H3Q1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDC42EP4Q9H3Q1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42EP4Q9H3Q1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42EP4Q9H3Q1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.49■■□□□ 1.67
CDC42EP4Q9H3Q1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CDC42EP4Q9H3Q1 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42EP4Q9H3Q1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42EP4Q9H3Q1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42EP4Q9H3Q1 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42EP4Q9H3Q1 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42EP4Q9H3Q1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42EP4Q9H3Q1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDC42EP4Q9H3Q1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42EP4Q9H3Q1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42EP4Q9H3Q1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDC42EP4Q9H3Q1 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.47■■□□□ 1.67
CDC42EP4Q9H3Q1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42EP4Q9H3Q1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.46■■□□□ 1.67
CDC42EP4Q9H3Q1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42EP4Q9H3Q1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.46■■□□□ 1.67
CDC42EP4Q9H3Q1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42EP4Q9H3Q1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDC42EP4Q9H3Q1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC25.45■■□□□ 1.67
CDC42EP4Q9H3Q1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CDC42EP4Q9H3Q1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
CDC42EP4Q9H3Q1 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.45■■□□□ 1.66
CDC42EP4Q9H3Q1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.45■■□□□ 1.66
CDC42EP4Q9H3Q1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.44■■□□□ 1.66
CDC42EP4Q9H3Q1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
CDC42EP4Q9H3Q1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.44■■□□□ 1.66
CDC42EP4Q9H3Q1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.43■■□□□ 1.66
CDC42EP4Q9H3Q1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
CDC42EP4Q9H3Q1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CDC42EP4Q9H3Q1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CDC42EP4Q9H3Q1 DUSP8P4-201ENST00000399538 1761 ntBASIC25.42■■□□□ 1.66
CDC42EP4Q9H3Q1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CDC42EP4Q9H3Q1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
CDC42EP4Q9H3Q1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
CDC42EP4Q9H3Q1 AC092803.2-201ENST00000564287 1899 ntBASIC25.4■■□□□ 1.66
CDC42EP4Q9H3Q1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
CDC42EP4Q9H3Q1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
CDC42EP4Q9H3Q1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CDC42EP4Q9H3Q1 LINC00273-201ENST00000539813 1452 ntBASIC25.4■■□□□ 1.66
CDC42EP4Q9H3Q1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 8.1 ms