Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.18■□□□□ 0.98
ALX4Q9H161 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.18■□□□□ 0.98
ALX4Q9H161 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ALX4Q9H161 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALX4Q9H161 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALX4Q9H161 SUZ12P1-203ENST00000578195 985 ntBASIC21.17■□□□□ 0.98
ALX4Q9H161 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ALX4Q9H161 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ALX4Q9H161 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALX4Q9H161 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ALX4Q9H161 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ALX4Q9H161 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ALX4Q9H161 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ALX4Q9H161 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.15■□□□□ 0.98
ALX4Q9H161 DUSP8P4-201ENST00000399538 1761 ntBASIC21.15■□□□□ 0.98
ALX4Q9H161 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ALX4Q9H161 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.15■□□□□ 0.98
ALX4Q9H161 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ALX4Q9H161 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ALX4Q9H161 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALX4Q9H161 AP002414.2-202ENST00000590929 1450 ntBASIC21.13■□□□□ 0.97
ALX4Q9H161 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALX4Q9H161 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALX4Q9H161 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ALX4Q9H161 AL391121.1-201ENST00000607967 1349 ntBASIC21.13■□□□□ 0.97
ALX4Q9H161 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.13■□□□□ 0.97
ALX4Q9H161 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ALX4Q9H161 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
ALX4Q9H161 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ALX4Q9H161 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ALX4Q9H161 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ALX4Q9H161 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ALX4Q9H161 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ALX4Q9H161 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ALX4Q9H161 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ALX4Q9H161 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ALX4Q9H161 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ALX4Q9H161 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ALX4Q9H161 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ALX4Q9H161 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ALX4Q9H161 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ALX4Q9H161 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ALX4Q9H161 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALX4Q9H161 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.09■□□□□ 0.97
ALX4Q9H161 AC100797.4-201ENST00000631653 1827 ntBASIC21.09■□□□□ 0.97
ALX4Q9H161 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALX4Q9H161 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALX4Q9H161 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ALX4Q9H161 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ALX4Q9H161 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ALX4Q9H161 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALX4Q9H161 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
ALX4Q9H161 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALX4Q9H161 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALX4Q9H161 EBPL-202ENST00000378268 680 ntTSL 3 BASIC21.06■□□□□ 0.96
ALX4Q9H161 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALX4Q9H161 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALX4Q9H161 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.06■□□□□ 0.96
ALX4Q9H161 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALX4Q9H161 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALX4Q9H161 AC127502.1-201ENST00000399971 1502 ntBASIC21.05■□□□□ 0.96
ALX4Q9H161 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ALX4Q9H161 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ALX4Q9H161 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ALX4Q9H161 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALX4Q9H161 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALX4Q9H161 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ALX4Q9H161 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
ALX4Q9H161 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALX4Q9H161 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.04■□□□□ 0.96
ALX4Q9H161 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.04■□□□□ 0.96
ALX4Q9H161 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALX4Q9H161 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.03■□□□□ 0.96
ALX4Q9H161 AC092803.2-201ENST00000564287 1899 ntBASIC21.03■□□□□ 0.96
ALX4Q9H161 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALX4Q9H161 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ALX4Q9H161 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALX4Q9H161 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ALX4Q9H161 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ALX4Q9H161 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.02■□□□□ 0.96
ALX4Q9H161 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.02■□□□□ 0.95
ALX4Q9H161 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALX4Q9H161 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ALX4Q9H161 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
ALX4Q9H161 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ALX4Q9H161 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21■□□□□ 0.95
ALX4Q9H161 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ALX4Q9H161 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALX4Q9H161 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21■□□□□ 0.95
ALX4Q9H161 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ALX4Q9H161 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21■□□□□ 0.95
ALX4Q9H161 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALX4Q9H161 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ALX4Q9H161 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALX4Q9H161 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ALX4Q9H161 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ALX4Q9H161 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ALX4Q9H161 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ALX4Q9H161 AC018358.1-201ENST00000631079 1402 ntBASIC20.97■□□□□ 0.95
ALX4Q9H161 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms