Protein–RNA interactions for Protein: Q96EL3

MRPL53, 39S ribosomal protein L53, mitochondrial, humanhuman

Known RBP Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL53Q96EL3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.89■□□□□ 0.61
MRPL53Q96EL3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL53Q96EL3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MRPL53Q96EL3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.88■□□□□ 0.61
MRPL53Q96EL3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL53Q96EL3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
MRPL53Q96EL3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
MRPL53Q96EL3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRPL53Q96EL3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
MRPL53Q96EL3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRPL53Q96EL3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
MRPL53Q96EL3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL53Q96EL3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.86■□□□□ 0.61
MRPL53Q96EL3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL53Q96EL3 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL53Q96EL3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.86■□□□□ 0.61
MRPL53Q96EL3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.86■□□□□ 0.61
MRPL53Q96EL3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
MRPL53Q96EL3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL53Q96EL3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.85■□□□□ 0.61
MRPL53Q96EL3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL53Q96EL3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL53Q96EL3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MRPL53Q96EL3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL53Q96EL3 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC18.84■□□□□ 0.61
MRPL53Q96EL3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL53Q96EL3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL53Q96EL3 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MRPL53Q96EL3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
MRPL53Q96EL3 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPL53Q96EL3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.83■□□□□ 0.6
MRPL53Q96EL3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.83■□□□□ 0.6
MRPL53Q96EL3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MRPL53Q96EL3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
MRPL53Q96EL3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
MRPL53Q96EL3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.81■□□□□ 0.6
MRPL53Q96EL3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MRPL53Q96EL3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL53Q96EL3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.81■□□□□ 0.6
MRPL53Q96EL3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MRPL53Q96EL3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL53Q96EL3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
MRPL53Q96EL3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MRPL53Q96EL3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.8■□□□□ 0.6
MRPL53Q96EL3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL53Q96EL3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MRPL53Q96EL3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL53Q96EL3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.79■□□□□ 0.6
MRPL53Q96EL3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL53Q96EL3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MRPL53Q96EL3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.79■□□□□ 0.6
MRPL53Q96EL3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
MRPL53Q96EL3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.79■□□□□ 0.6
MRPL53Q96EL3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
MRPL53Q96EL3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
MRPL53Q96EL3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.78■□□□□ 0.6
MRPL53Q96EL3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.78■□□□□ 0.6
MRPL53Q96EL3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
MRPL53Q96EL3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL53Q96EL3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MRPL53Q96EL3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MRPL53Q96EL3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL53Q96EL3 AC087741.3-201ENST00000624270 1347 ntBASIC18.76■□□□□ 0.59
MRPL53Q96EL3 AC091060.1-201ENST00000623524 1766 ntBASIC18.76■□□□□ 0.59
MRPL53Q96EL3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL53Q96EL3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MRPL53Q96EL3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL53Q96EL3 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.75■□□□□ 0.59
MRPL53Q96EL3 AC044849.2-201ENST00000606596 710 ntBASIC18.75■□□□□ 0.59
MRPL53Q96EL3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MRPL53Q96EL3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.74■□□□□ 0.59
MRPL53Q96EL3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.74■□□□□ 0.59
MRPL53Q96EL3 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL53Q96EL3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MRPL53Q96EL3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
MRPL53Q96EL3 AC145676.1-201ENST00000514988 2004 ntBASIC18.73■□□□□ 0.59
MRPL53Q96EL3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL53Q96EL3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MRPL53Q96EL3 AC110285.7-201ENST00000624417 1536 ntBASIC18.73■□□□□ 0.59
MRPL53Q96EL3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC18.72■□□□□ 0.59
MRPL53Q96EL3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL53Q96EL3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL53Q96EL3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.72■□□□□ 0.59
MRPL53Q96EL3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL53Q96EL3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL53Q96EL3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL53Q96EL3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MRPL53Q96EL3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.71■□□□□ 0.59
MRPL53Q96EL3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
MRPL53Q96EL3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL53Q96EL3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MRPL53Q96EL3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL53Q96EL3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL53Q96EL3 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL53Q96EL3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MRPL53Q96EL3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.7■□□□□ 0.58
MRPL53Q96EL3 AL449106.1-201ENST00000608517 1980 ntBASIC18.7■□□□□ 0.58
MRPL53Q96EL3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MRPL53Q96EL3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MRPL53Q96EL3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms