Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
LSMEM1Q8N8F7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LSMEM1Q8N8F7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
LSMEM1Q8N8F7 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
LSMEM1Q8N8F7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
LSMEM1Q8N8F7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
LSMEM1Q8N8F7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
LSMEM1Q8N8F7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LSMEM1Q8N8F7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
LSMEM1Q8N8F7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
LSMEM1Q8N8F7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
LSMEM1Q8N8F7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LSMEM1Q8N8F7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
LSMEM1Q8N8F7 AC110285.7-201ENST00000624417 1536 ntBASIC22.97■■□□□ 1.27
LSMEM1Q8N8F7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
LSMEM1Q8N8F7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LSMEM1Q8N8F7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.96■■□□□ 1.27
LSMEM1Q8N8F7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.96■■□□□ 1.27
LSMEM1Q8N8F7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC22.96■■□□□ 1.27
LSMEM1Q8N8F7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.96■■□□□ 1.27
LSMEM1Q8N8F7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
LSMEM1Q8N8F7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LSMEM1Q8N8F7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LSMEM1Q8N8F7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
LSMEM1Q8N8F7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
LSMEM1Q8N8F7 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
LSMEM1Q8N8F7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.95■■□□□ 1.26
LSMEM1Q8N8F7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
LSMEM1Q8N8F7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.93■■□□□ 1.26
LSMEM1Q8N8F7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
LSMEM1Q8N8F7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
LSMEM1Q8N8F7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
LSMEM1Q8N8F7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.92■■□□□ 1.26
LSMEM1Q8N8F7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.92■■□□□ 1.26
LSMEM1Q8N8F7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LSMEM1Q8N8F7 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
LSMEM1Q8N8F7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
LSMEM1Q8N8F7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.92■■□□□ 1.26
LSMEM1Q8N8F7 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
LSMEM1Q8N8F7 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.91■■□□□ 1.26
LSMEM1Q8N8F7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
LSMEM1Q8N8F7 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
LSMEM1Q8N8F7 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.91■■□□□ 1.26
LSMEM1Q8N8F7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
LSMEM1Q8N8F7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
LSMEM1Q8N8F7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.9■■□□□ 1.26
LSMEM1Q8N8F7 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
LSMEM1Q8N8F7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
LSMEM1Q8N8F7 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.9■■□□□ 1.26
LSMEM1Q8N8F7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
LSMEM1Q8N8F7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
LSMEM1Q8N8F7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
LSMEM1Q8N8F7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.88■■□□□ 1.25
LSMEM1Q8N8F7 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LSMEM1Q8N8F7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
LSMEM1Q8N8F7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
LSMEM1Q8N8F7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.88■■□□□ 1.25
LSMEM1Q8N8F7 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.88■■□□□ 1.25
LSMEM1Q8N8F7 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.88■■□□□ 1.25
LSMEM1Q8N8F7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.88■■□□□ 1.25
LSMEM1Q8N8F7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
LSMEM1Q8N8F7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LSMEM1Q8N8F7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
LSMEM1Q8N8F7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
LSMEM1Q8N8F7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.86■■□□□ 1.25
LSMEM1Q8N8F7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
LSMEM1Q8N8F7 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
LSMEM1Q8N8F7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
LSMEM1Q8N8F7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.86■■□□□ 1.25
LSMEM1Q8N8F7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.86■■□□□ 1.25
LSMEM1Q8N8F7 LINC01971-201ENST00000617888 1048 ntBASIC22.86■■□□□ 1.25
LSMEM1Q8N8F7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LSMEM1Q8N8F7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LSMEM1Q8N8F7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LSMEM1Q8N8F7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
LSMEM1Q8N8F7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LSMEM1Q8N8F7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
LSMEM1Q8N8F7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LSMEM1Q8N8F7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.83■■□□□ 1.25
LSMEM1Q8N8F7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.83■■□□□ 1.25
LSMEM1Q8N8F7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LSMEM1Q8N8F7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
LSMEM1Q8N8F7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
LSMEM1Q8N8F7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LSMEM1Q8N8F7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.82■■□□□ 1.24
LSMEM1Q8N8F7 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
LSMEM1Q8N8F7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LSMEM1Q8N8F7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
LSMEM1Q8N8F7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LSMEM1Q8N8F7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.82■■□□□ 1.24
LSMEM1Q8N8F7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.82■■□□□ 1.24
LSMEM1Q8N8F7 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.82■■□□□ 1.24
LSMEM1Q8N8F7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LSMEM1Q8N8F7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.81■■□□□ 1.24
LSMEM1Q8N8F7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.81■■□□□ 1.24
LSMEM1Q8N8F7 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.81■■□□□ 1.24
LSMEM1Q8N8F7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
LSMEM1Q8N8F7 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.81■■□□□ 1.24
LSMEM1Q8N8F7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.8■■□□□ 1.24
LSMEM1Q8N8F7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms