Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.47
COL27A1Q8IZC6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.27■■□□□ 1.47
COL27A1Q8IZC6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC24.26■■□□□ 1.47
COL27A1Q8IZC6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
COL27A1Q8IZC6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL27A1Q8IZC6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL27A1Q8IZC6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL27A1Q8IZC6 ATP5G2P3-201ENST00000429083 425 ntBASIC24.24■■□□□ 1.47
COL27A1Q8IZC6 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL27A1Q8IZC6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
COL27A1Q8IZC6 AC007029.1-201ENST00000604183 313 ntBASIC24.24■■□□□ 1.47
COL27A1Q8IZC6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL27A1Q8IZC6 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL27A1Q8IZC6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.23■■□□□ 1.47
COL27A1Q8IZC6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
COL27A1Q8IZC6 RARRES2P1-201ENST00000474487 481 ntBASIC24.23■■□□□ 1.47
COL27A1Q8IZC6 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.23■■□□□ 1.47
COL27A1Q8IZC6 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.22■■□□□ 1.47
COL27A1Q8IZC6 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL27A1Q8IZC6 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.22■■□□□ 1.47
COL27A1Q8IZC6 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
COL27A1Q8IZC6 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.21■■□□□ 1.47
COL27A1Q8IZC6 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.2■■□□□ 1.46
COL27A1Q8IZC6 AL592293.1-201ENST00000502889 1188 ntBASIC24.2■■□□□ 1.46
COL27A1Q8IZC6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
COL27A1Q8IZC6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.2■■□□□ 1.46
COL27A1Q8IZC6 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
COL27A1Q8IZC6 ST7-AS1-201ENST00000456775 1889 ntBASIC24.2■■□□□ 1.46
COL27A1Q8IZC6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
COL27A1Q8IZC6 AC025884.2-201ENST00000553429 711 ntBASIC24.19■■□□□ 1.46
COL27A1Q8IZC6 AC129492.7-201ENST00000622992 756 ntBASIC24.19■■□□□ 1.46
COL27A1Q8IZC6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
COL27A1Q8IZC6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.19■■□□□ 1.46
COL27A1Q8IZC6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
COL27A1Q8IZC6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.19■■□□□ 1.46
COL27A1Q8IZC6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL27A1Q8IZC6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
COL27A1Q8IZC6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.19■■□□□ 1.46
COL27A1Q8IZC6 AC100797.4-201ENST00000631653 1827 ntBASIC24.18■■□□□ 1.46
COL27A1Q8IZC6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL27A1Q8IZC6 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
COL27A1Q8IZC6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL27A1Q8IZC6 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.17■■□□□ 1.46
COL27A1Q8IZC6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
COL27A1Q8IZC6 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL27A1Q8IZC6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.17■■□□□ 1.46
COL27A1Q8IZC6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
COL27A1Q8IZC6 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
COL27A1Q8IZC6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
COL27A1Q8IZC6 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.16■■□□□ 1.46
COL27A1Q8IZC6 AC009831.1-201ENST00000580420 1582 ntBASIC24.16■■□□□ 1.46
COL27A1Q8IZC6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.15■■□□□ 1.46
COL27A1Q8IZC6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL27A1Q8IZC6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
COL27A1Q8IZC6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
COL27A1Q8IZC6 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.15■■□□□ 1.46
COL27A1Q8IZC6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.14■■□□□ 1.46
COL27A1Q8IZC6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.14■■□□□ 1.46
COL27A1Q8IZC6 AC126177.7-201ENST00000547904 679 ntBASIC24.14■■□□□ 1.45
COL27A1Q8IZC6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC24.14■■□□□ 1.45
COL27A1Q8IZC6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL27A1Q8IZC6 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL27A1Q8IZC6 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC24.13■■□□□ 1.45
COL27A1Q8IZC6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL27A1Q8IZC6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
COL27A1Q8IZC6 AP004833.2-201ENST00000532228 1454 ntBASIC24.13■■□□□ 1.45
COL27A1Q8IZC6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
COL27A1Q8IZC6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
COL27A1Q8IZC6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.12■■□□□ 1.45
COL27A1Q8IZC6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
COL27A1Q8IZC6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.12■■□□□ 1.45
COL27A1Q8IZC6 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC24.11■■□□□ 1.45
COL27A1Q8IZC6 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.11■■□□□ 1.45
COL27A1Q8IZC6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
COL27A1Q8IZC6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
COL27A1Q8IZC6 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
COL27A1Q8IZC6 AL451085.2-201ENST00000605085 799 ntBASIC24.09■■□□□ 1.45
COL27A1Q8IZC6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
COL27A1Q8IZC6 HES4-204ENST00000484667 667 ntTSL 3 BASIC24.07■■□□□ 1.44
COL27A1Q8IZC6 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
COL27A1Q8IZC6 AC133552.2-201ENST00000619106 1032 ntBASIC24.07■■□□□ 1.44
COL27A1Q8IZC6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.07■■□□□ 1.44
COL27A1Q8IZC6 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
COL27A1Q8IZC6 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL27A1Q8IZC6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
COL27A1Q8IZC6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
COL27A1Q8IZC6 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL27A1Q8IZC6 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
COL27A1Q8IZC6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
COL27A1Q8IZC6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC24.04■■□□□ 1.44
COL27A1Q8IZC6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
COL27A1Q8IZC6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
COL27A1Q8IZC6 RAP2CP1-202ENST00000605179 643 ntBASIC24.04■■□□□ 1.44
COL27A1Q8IZC6 DUX4L9-201ENST00000449051 1259 ntBASIC24.04■■□□□ 1.44
COL27A1Q8IZC6 SPCS2P3-201ENST00000500401 656 ntBASIC24.04■■□□□ 1.44
COL27A1Q8IZC6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.03■■□□□ 1.44
COL27A1Q8IZC6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
COL27A1Q8IZC6 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.03■■□□□ 1.44
COL27A1Q8IZC6 AC093536.1-201ENST00000569153 554 ntBASIC24.03■■□□□ 1.44
COL27A1Q8IZC6 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms