Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
TRIM42Q8IWZ5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
TRIM42Q8IWZ5 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
TRIM42Q8IWZ5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.9■■□□□ 1.58
TRIM42Q8IWZ5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM42Q8IWZ5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
TRIM42Q8IWZ5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.89■■□□□ 1.58
TRIM42Q8IWZ5 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM42Q8IWZ5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM42Q8IWZ5 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
TRIM42Q8IWZ5 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.89■■□□□ 1.57
TRIM42Q8IWZ5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.89■■□□□ 1.57
TRIM42Q8IWZ5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
TRIM42Q8IWZ5 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
TRIM42Q8IWZ5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC24.88■■□□□ 1.57
TRIM42Q8IWZ5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.87■■□□□ 1.57
TRIM42Q8IWZ5 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
TRIM42Q8IWZ5 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.87■■□□□ 1.57
TRIM42Q8IWZ5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM42Q8IWZ5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
TRIM42Q8IWZ5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
TRIM42Q8IWZ5 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
TRIM42Q8IWZ5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM42Q8IWZ5 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.85■■□□□ 1.57
TRIM42Q8IWZ5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM42Q8IWZ5 EBPL-202ENST00000378268 680 ntTSL 3 BASIC24.85■■□□□ 1.57
TRIM42Q8IWZ5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
TRIM42Q8IWZ5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.85■■□□□ 1.57
TRIM42Q8IWZ5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.85■■□□□ 1.57
TRIM42Q8IWZ5 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
TRIM42Q8IWZ5 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM42Q8IWZ5 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.83■■□□□ 1.57
TRIM42Q8IWZ5 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM42Q8IWZ5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.83■■□□□ 1.57
TRIM42Q8IWZ5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
TRIM42Q8IWZ5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM42Q8IWZ5 CAHM-201ENST00000604200 896 ntBASIC24.82■■□□□ 1.56
TRIM42Q8IWZ5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.82■■□□□ 1.56
TRIM42Q8IWZ5 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.82■■□□□ 1.56
TRIM42Q8IWZ5 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM42Q8IWZ5 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
TRIM42Q8IWZ5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
TRIM42Q8IWZ5 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC24.81■■□□□ 1.56
TRIM42Q8IWZ5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM42Q8IWZ5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM42Q8IWZ5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.81■■□□□ 1.56
TRIM42Q8IWZ5 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM42Q8IWZ5 SUZ12P1-203ENST00000578195 985 ntBASIC24.81■■□□□ 1.56
TRIM42Q8IWZ5 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.8■■□□□ 1.56
TRIM42Q8IWZ5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM42Q8IWZ5 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM42Q8IWZ5 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.79■■□□□ 1.56
TRIM42Q8IWZ5 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM42Q8IWZ5 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
TRIM42Q8IWZ5 AC020928.2-201ENST00000588717 2197 ntBASIC24.78■■□□□ 1.56
TRIM42Q8IWZ5 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM42Q8IWZ5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM42Q8IWZ5 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.78■■□□□ 1.56
TRIM42Q8IWZ5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.78■■□□□ 1.56
TRIM42Q8IWZ5 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM42Q8IWZ5 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
TRIM42Q8IWZ5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM42Q8IWZ5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM42Q8IWZ5 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM42Q8IWZ5 AL391121.1-201ENST00000607967 1349 ntBASIC24.77■■□□□ 1.56
TRIM42Q8IWZ5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM42Q8IWZ5 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
TRIM42Q8IWZ5 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM42Q8IWZ5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.76■■□□□ 1.55
TRIM42Q8IWZ5 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM42Q8IWZ5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM42Q8IWZ5 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.75■■□□□ 1.55
TRIM42Q8IWZ5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
TRIM42Q8IWZ5 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM42Q8IWZ5 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM42Q8IWZ5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM42Q8IWZ5 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
TRIM42Q8IWZ5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM42Q8IWZ5 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM42Q8IWZ5 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
TRIM42Q8IWZ5 DUSP8P4-201ENST00000399538 1761 ntBASIC24.73■■□□□ 1.55
TRIM42Q8IWZ5 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM42Q8IWZ5 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM42Q8IWZ5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
TRIM42Q8IWZ5 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
TRIM42Q8IWZ5 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM42Q8IWZ5 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM42Q8IWZ5 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM42Q8IWZ5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
TRIM42Q8IWZ5 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
TRIM42Q8IWZ5 AC135983.2-203ENST00000454486 1613 ntBASIC24.71■■□□□ 1.55
TRIM42Q8IWZ5 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.54
TRIM42Q8IWZ5 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM42Q8IWZ5 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM42Q8IWZ5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
TRIM42Q8IWZ5 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
TRIM42Q8IWZ5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
TRIM42Q8IWZ5 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.69■■□□□ 1.54
TRIM42Q8IWZ5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.69■■□□□ 1.54
TRIM42Q8IWZ5 AC092803.2-201ENST00000564287 1899 ntBASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms