Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.87■■■□□ 2.05
RSPH3Q86UC2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
RSPH3Q86UC2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
RSPH3Q86UC2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.86■■■□□ 2.05
RSPH3Q86UC2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
RSPH3Q86UC2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RSPH3Q86UC2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.85■■■□□ 2.05
RSPH3Q86UC2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
RSPH3Q86UC2 U85056.1-201ENST00000616429 682 ntBASIC27.85■■■□□ 2.05
RSPH3Q86UC2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.85■■■□□ 2.05
RSPH3Q86UC2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RSPH3Q86UC2 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.83■■■□□ 2.05
RSPH3Q86UC2 MED25-210ENST00000612854 801 ntTSL 5 BASIC27.83■■■□□ 2.05
RSPH3Q86UC2 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
RSPH3Q86UC2 MED25-214ENST00000622402 642 ntTSL 5 BASIC27.83■■■□□ 2.05
RSPH3Q86UC2 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RSPH3Q86UC2 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC27.83■■■□□ 2.05
RSPH3Q86UC2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC27.82■■■□□ 2.04
RSPH3Q86UC2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.81■■■□□ 2.04
RSPH3Q86UC2 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RSPH3Q86UC2 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RSPH3Q86UC2 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RSPH3Q86UC2 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.81■■■□□ 2.04
RSPH3Q86UC2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RSPH3Q86UC2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RSPH3Q86UC2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.8■■■□□ 2.04
RSPH3Q86UC2 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RSPH3Q86UC2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
RSPH3Q86UC2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RSPH3Q86UC2 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RSPH3Q86UC2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RSPH3Q86UC2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
RSPH3Q86UC2 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC27.79■■■□□ 2.04
RSPH3Q86UC2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.78■■■□□ 2.04
RSPH3Q86UC2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.78■■■□□ 2.04
RSPH3Q86UC2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
RSPH3Q86UC2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.78■■■□□ 2.04
RSPH3Q86UC2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC27.77■■■□□ 2.04
RSPH3Q86UC2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
RSPH3Q86UC2 AC018358.1-201ENST00000631079 1402 ntBASIC27.76■■■□□ 2.04
RSPH3Q86UC2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
RSPH3Q86UC2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC27.76■■■□□ 2.03
RSPH3Q86UC2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.76■■■□□ 2.03
RSPH3Q86UC2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.75■■■□□ 2.03
RSPH3Q86UC2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
RSPH3Q86UC2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC27.75■■■□□ 2.03
RSPH3Q86UC2 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
RSPH3Q86UC2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
RSPH3Q86UC2 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
RSPH3Q86UC2 REST-210ENST00000638187 1334 ntTSL 5 BASIC27.74■■■□□ 2.03
RSPH3Q86UC2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
RSPH3Q86UC2 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC27.74■■■□□ 2.03
RSPH3Q86UC2 AL157400.5-201ENST00000507624 621 ntBASIC27.74■■■□□ 2.03
RSPH3Q86UC2 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
RSPH3Q86UC2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
RSPH3Q86UC2 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
RSPH3Q86UC2 AL033527.3-201ENST00000566366 1196 ntBASIC27.73■■■□□ 2.03
RSPH3Q86UC2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.72■■■□□ 2.03
RSPH3Q86UC2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
RSPH3Q86UC2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.72■■■□□ 2.03
RSPH3Q86UC2 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
RSPH3Q86UC2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.71■■■□□ 2.03
RSPH3Q86UC2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
RSPH3Q86UC2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
RSPH3Q86UC2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.71■■■□□ 2.03
RSPH3Q86UC2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.71■■■□□ 2.03
RSPH3Q86UC2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
RSPH3Q86UC2 AL139393.2-201ENST00000608721 2025 ntBASIC27.7■■■□□ 2.03
RSPH3Q86UC2 AL359258.2-201ENST00000564063 1566 ntBASIC27.7■■■□□ 2.03
RSPH3Q86UC2 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
RSPH3Q86UC2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.7■■■□□ 2.02
RSPH3Q86UC2 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
RSPH3Q86UC2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
RSPH3Q86UC2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
RSPH3Q86UC2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
RSPH3Q86UC2 KRT18P60-201ENST00000312876 1297 ntBASIC27.69■■■□□ 2.02
RSPH3Q86UC2 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
RSPH3Q86UC2 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC27.69■■■□□ 2.02
RSPH3Q86UC2 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC27.68■■■□□ 2.02
RSPH3Q86UC2 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC27.68■■■□□ 2.02
RSPH3Q86UC2 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC27.68■■■□□ 2.02
RSPH3Q86UC2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
RSPH3Q86UC2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC27.67■■■□□ 2.02
RSPH3Q86UC2 TSPY13P-201ENST00000338964 914 ntBASIC27.67■■■□□ 2.02
RSPH3Q86UC2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
RSPH3Q86UC2 AC007029.1-201ENST00000604183 313 ntBASIC27.67■■■□□ 2.02
RSPH3Q86UC2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
RSPH3Q86UC2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
RSPH3Q86UC2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
RSPH3Q86UC2 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RSPH3Q86UC2 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
RSPH3Q86UC2 ABCB10P3-201ENST00000561950 2166 ntBASIC27.65■■■□□ 2.02
RSPH3Q86UC2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.64■■■□□ 2.02
RSPH3Q86UC2 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
RSPH3Q86UC2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
RSPH3Q86UC2 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
RSPH3Q86UC2 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.01
RSPH3Q86UC2 SMPD5-203ENST00000639008 1464 ntBASIC27.64■■■□□ 2.01
RSPH3Q86UC2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.63■■■□□ 2.01
RSPH3Q86UC2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms