Protein–RNA interactions for Protein: Q5VVX9

UBE2U, Ubiquitin-conjugating enzyme E2 U, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2UQ5VVX9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.59■■□□□ 1.21
UBE2UQ5VVX9 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
UBE2UQ5VVX9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
UBE2UQ5VVX9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBE2UQ5VVX9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
UBE2UQ5VVX9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBE2UQ5VVX9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBE2UQ5VVX9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
UBE2UQ5VVX9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
UBE2UQ5VVX9 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
UBE2UQ5VVX9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
UBE2UQ5VVX9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBE2UQ5VVX9 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.57■■□□□ 1.2
UBE2UQ5VVX9 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
UBE2UQ5VVX9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBE2UQ5VVX9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBE2UQ5VVX9 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
UBE2UQ5VVX9 AC092803.2-201ENST00000564287 1899 ntBASIC22.56■■□□□ 1.2
UBE2UQ5VVX9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC22.55■■□□□ 1.2
UBE2UQ5VVX9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBE2UQ5VVX9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
UBE2UQ5VVX9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
UBE2UQ5VVX9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBE2UQ5VVX9 AL133380.1-201ENST00000506013 324 ntBASIC22.54■■□□□ 1.2
UBE2UQ5VVX9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.54■■□□□ 1.2
UBE2UQ5VVX9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBE2UQ5VVX9 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
UBE2UQ5VVX9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
UBE2UQ5VVX9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBE2UQ5VVX9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
UBE2UQ5VVX9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBE2UQ5VVX9 AC018358.1-201ENST00000631079 1402 ntBASIC22.52■■□□□ 1.2
UBE2UQ5VVX9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.52■■□□□ 1.2
UBE2UQ5VVX9 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
UBE2UQ5VVX9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
UBE2UQ5VVX9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
UBE2UQ5VVX9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
UBE2UQ5VVX9 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.51■■□□□ 1.19
UBE2UQ5VVX9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
UBE2UQ5VVX9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
UBE2UQ5VVX9 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBE2UQ5VVX9 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBE2UQ5VVX9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.5■■□□□ 1.19
UBE2UQ5VVX9 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.49■■□□□ 1.19
UBE2UQ5VVX9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBE2UQ5VVX9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.49■■□□□ 1.19
UBE2UQ5VVX9 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UBE2UQ5VVX9 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBE2UQ5VVX9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBE2UQ5VVX9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
UBE2UQ5VVX9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
UBE2UQ5VVX9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UBE2UQ5VVX9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
UBE2UQ5VVX9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
UBE2UQ5VVX9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
UBE2UQ5VVX9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
UBE2UQ5VVX9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.48■■□□□ 1.19
UBE2UQ5VVX9 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
UBE2UQ5VVX9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBE2UQ5VVX9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBE2UQ5VVX9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBE2UQ5VVX9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBE2UQ5VVX9 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
UBE2UQ5VVX9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC22.46■■□□□ 1.19
UBE2UQ5VVX9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.46■■□□□ 1.19
UBE2UQ5VVX9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.46■■□□□ 1.19
UBE2UQ5VVX9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.45■■□□□ 1.18
UBE2UQ5VVX9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBE2UQ5VVX9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.45■■□□□ 1.18
UBE2UQ5VVX9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2UQ5VVX9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2UQ5VVX9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
UBE2UQ5VVX9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.44■■□□□ 1.18
UBE2UQ5VVX9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
UBE2UQ5VVX9 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.43■■□□□ 1.18
UBE2UQ5VVX9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
UBE2UQ5VVX9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBE2UQ5VVX9 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBE2UQ5VVX9 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBE2UQ5VVX9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBE2UQ5VVX9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UBE2UQ5VVX9 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
UBE2UQ5VVX9 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC22.42■■□□□ 1.18
UBE2UQ5VVX9 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
UBE2UQ5VVX9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
UBE2UQ5VVX9 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
UBE2UQ5VVX9 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBE2UQ5VVX9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBE2UQ5VVX9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
UBE2UQ5VVX9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBE2UQ5VVX9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBE2UQ5VVX9 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBE2UQ5VVX9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBE2UQ5VVX9 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UBE2UQ5VVX9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.4■■□□□ 1.18
UBE2UQ5VVX9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.4■■□□□ 1.18
UBE2UQ5VVX9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
UBE2UQ5VVX9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
UBE2UQ5VVX9 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
UBE2UQ5VVX9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms