Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13DQ5THJ4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.32■□□□□ 0.36
VPS13DQ5THJ4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13DQ5THJ4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13DQ5THJ4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13DQ5THJ4 AC007029.1-201ENST00000604183 313 ntBASIC17.32■□□□□ 0.36
VPS13DQ5THJ4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VPS13DQ5THJ4 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
VPS13DQ5THJ4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13DQ5THJ4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13DQ5THJ4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.31■□□□□ 0.36
VPS13DQ5THJ4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.31■□□□□ 0.36
VPS13DQ5THJ4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VPS13DQ5THJ4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.3■□□□□ 0.36
VPS13DQ5THJ4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VPS13DQ5THJ4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.3■□□□□ 0.36
VPS13DQ5THJ4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
VPS13DQ5THJ4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13DQ5THJ4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13DQ5THJ4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13DQ5THJ4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13DQ5THJ4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13DQ5THJ4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS13DQ5THJ4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.29■□□□□ 0.36
VPS13DQ5THJ4 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VPS13DQ5THJ4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS13DQ5THJ4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC17.28■□□□□ 0.36
VPS13DQ5THJ4 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS13DQ5THJ4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VPS13DQ5THJ4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS13DQ5THJ4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VPS13DQ5THJ4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VPS13DQ5THJ4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
VPS13DQ5THJ4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.27■□□□□ 0.36
VPS13DQ5THJ4 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.27■□□□□ 0.36
VPS13DQ5THJ4 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
VPS13DQ5THJ4 AC009831.1-201ENST00000580420 1582 ntBASIC17.27■□□□□ 0.35
VPS13DQ5THJ4 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
VPS13DQ5THJ4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
VPS13DQ5THJ4 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VPS13DQ5THJ4 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
VPS13DQ5THJ4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
VPS13DQ5THJ4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
VPS13DQ5THJ4 AC026202.3-201ENST00000600805 1127 ntBASIC17.26■□□□□ 0.35
VPS13DQ5THJ4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VPS13DQ5THJ4 SPCS2P3-201ENST00000500401 656 ntBASIC17.25■□□□□ 0.35
VPS13DQ5THJ4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.25■□□□□ 0.35
VPS13DQ5THJ4 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
VPS13DQ5THJ4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
VPS13DQ5THJ4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
VPS13DQ5THJ4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VPS13DQ5THJ4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.24■□□□□ 0.35
VPS13DQ5THJ4 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.24■□□□□ 0.35
VPS13DQ5THJ4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS13DQ5THJ4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC17.24■□□□□ 0.35
VPS13DQ5THJ4 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.24■□□□□ 0.35
VPS13DQ5THJ4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VPS13DQ5THJ4 ECEL1P2-201ENST00000461596 1295 ntBASIC17.24■□□□□ 0.35
VPS13DQ5THJ4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC17.23■□□□□ 0.35
VPS13DQ5THJ4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS13DQ5THJ4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VPS13DQ5THJ4 RAP2CP1-202ENST00000605179 643 ntBASIC17.23■□□□□ 0.35
VPS13DQ5THJ4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VPS13DQ5THJ4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VPS13DQ5THJ4 DUX4L9-201ENST00000449051 1259 ntBASIC17.22■□□□□ 0.35
VPS13DQ5THJ4 HES4-204ENST00000484667 667 ntTSL 3 BASIC17.22■□□□□ 0.35
VPS13DQ5THJ4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.22■□□□□ 0.35
VPS13DQ5THJ4 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
VPS13DQ5THJ4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC17.22■□□□□ 0.35
VPS13DQ5THJ4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VPS13DQ5THJ4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS13DQ5THJ4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VPS13DQ5THJ4 DUX4L18-201ENST00000553347 1267 ntBASIC17.21■□□□□ 0.35
VPS13DQ5THJ4 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS13DQ5THJ4 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
VPS13DQ5THJ4 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
VPS13DQ5THJ4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS13DQ5THJ4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS13DQ5THJ4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
VPS13DQ5THJ4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
VPS13DQ5THJ4 AC126177.7-201ENST00000547904 679 ntBASIC17.19■□□□□ 0.34
VPS13DQ5THJ4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS13DQ5THJ4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS13DQ5THJ4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS13DQ5THJ4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS13DQ5THJ4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.19■□□□□ 0.34
VPS13DQ5THJ4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS13DQ5THJ4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
VPS13DQ5THJ4 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS13DQ5THJ4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
VPS13DQ5THJ4 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC17.19■□□□□ 0.34
VPS13DQ5THJ4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
VPS13DQ5THJ4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.18■□□□□ 0.34
VPS13DQ5THJ4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
VPS13DQ5THJ4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.18■□□□□ 0.34
VPS13DQ5THJ4 AC103834.1-201ENST00000520383 144 ntBASIC17.18■□□□□ 0.34
VPS13DQ5THJ4 AC133552.2-201ENST00000619106 1032 ntBASIC17.18■□□□□ 0.34
VPS13DQ5THJ4 AC100797.4-201ENST00000631653 1827 ntBASIC17.18■□□□□ 0.34
VPS13DQ5THJ4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
VPS13DQ5THJ4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms