Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL157400.5-201ENST00000507624 621 ntBASIC28.3■■■□□ 2.12
CPT1AP50416 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
CPT1AP50416 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CPT1AP50416 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.29■■■□□ 2.12
CPT1AP50416 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC28.29■■■□□ 2.12
CPT1AP50416 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
CPT1AP50416 TSPY13P-201ENST00000338964 914 ntBASIC28.29■■■□□ 2.12
CPT1AP50416 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
CPT1AP50416 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
CPT1AP50416 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.28■■■□□ 2.12
CPT1AP50416 AC100797.4-201ENST00000631653 1827 ntBASIC28.27■■■□□ 2.12
CPT1AP50416 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CPT1AP50416 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
CPT1AP50416 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CPT1AP50416 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CPT1AP50416 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
CPT1AP50416 AC004987.1-201ENST00000428627 508 ntBASIC28.25■■■□□ 2.11
CPT1AP50416 ATP5G2P3-201ENST00000429083 425 ntBASIC28.25■■■□□ 2.11
CPT1AP50416 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.25■■■□□ 2.11
CPT1AP50416 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.24■■■□□ 2.11
CPT1AP50416 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CPT1AP50416 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.24■■■□□ 2.11
CPT1AP50416 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CPT1AP50416 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.23■■■□□ 2.11
CPT1AP50416 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.23■■■□□ 2.11
CPT1AP50416 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.23■■■□□ 2.11
CPT1AP50416 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
CPT1AP50416 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
CPT1AP50416 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.22■■■□□ 2.11
CPT1AP50416 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.22■■■□□ 2.11
CPT1AP50416 AC007029.1-201ENST00000604183 313 ntBASIC28.22■■■□□ 2.11
CPT1AP50416 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.22■■■□□ 2.11
CPT1AP50416 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.22■■■□□ 2.11
CPT1AP50416 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
CPT1AP50416 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
CPT1AP50416 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
CPT1AP50416 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
CPT1AP50416 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CPT1AP50416 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
CPT1AP50416 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.1
CPT1AP50416 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.2■■■□□ 2.1
CPT1AP50416 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.2■■■□□ 2.1
CPT1AP50416 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
CPT1AP50416 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
CPT1AP50416 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CPT1AP50416 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.19■■■□□ 2.1
CPT1AP50416 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.19■■■□□ 2.1
CPT1AP50416 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CPT1AP50416 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.18■■■□□ 2.1
CPT1AP50416 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CPT1AP50416 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.18■■■□□ 2.1
CPT1AP50416 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
CPT1AP50416 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
CPT1AP50416 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.17■■■□□ 2.1
CPT1AP50416 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CPT1AP50416 AL359258.2-201ENST00000564063 1566 ntBASIC28.16■■■□□ 2.1
CPT1AP50416 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CPT1AP50416 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.16■■■□□ 2.1
CPT1AP50416 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.16■■■□□ 2.1
CPT1AP50416 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CPT1AP50416 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
CPT1AP50416 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CPT1AP50416 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.15■■■□□ 2.1
CPT1AP50416 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
CPT1AP50416 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CPT1AP50416 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CPT1AP50416 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CPT1AP50416 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC28.15■■■□□ 2.1
CPT1AP50416 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CPT1AP50416 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CPT1AP50416 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.09
CPT1AP50416 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CPT1AP50416 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
CPT1AP50416 SMPD5-203ENST00000639008 1464 ntBASIC28.13■■■□□ 2.09
CPT1AP50416 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CPT1AP50416 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
CPT1AP50416 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC28.12■■■□□ 2.09
CPT1AP50416 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CPT1AP50416 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CPT1AP50416 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.11■■■□□ 2.09
CPT1AP50416 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CPT1AP50416 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.11■■■□□ 2.09
CPT1AP50416 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CPT1AP50416 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
CPT1AP50416 AC133552.2-201ENST00000619106 1032 ntBASIC28.1■■■□□ 2.09
CPT1AP50416 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CPT1AP50416 AC009831.1-201ENST00000580420 1582 ntBASIC28.09■■■□□ 2.09
CPT1AP50416 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CPT1AP50416 AC129492.7-201ENST00000622992 756 ntBASIC28.09■■■□□ 2.09
CPT1AP50416 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC28.09■■■□□ 2.09
CPT1AP50416 AL592293.1-201ENST00000502889 1188 ntBASIC28.08■■■□□ 2.09
CPT1AP50416 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CPT1AP50416 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.07■■■□□ 2.08
CPT1AP50416 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.07■■■□□ 2.08
CPT1AP50416 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC28.07■■■□□ 2.08
CPT1AP50416 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
CPT1AP50416 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CPT1AP50416 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CPT1AP50416 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CPT1AP50416 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms