Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SLC6A12P48065 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
SLC6A12P48065 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.42■■□□□ 1.5
SLC6A12P48065 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
SLC6A12P48065 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SLC6A12P48065 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.41■■□□□ 1.5
SLC6A12P48065 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SLC6A12P48065 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
SLC6A12P48065 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SLC6A12P48065 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC6A12P48065 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SLC6A12P48065 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SLC6A12P48065 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC6A12P48065 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC6A12P48065 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.39■■□□□ 1.5
SLC6A12P48065 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SLC6A12P48065 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SLC6A12P48065 ZNRF2P2-203ENST00000454624 420 ntBASIC24.39■■□□□ 1.49
SLC6A12P48065 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SLC6A12P48065 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
SLC6A12P48065 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
SLC6A12P48065 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
SLC6A12P48065 DUX4L13-201ENST00000554103 1267 ntBASIC24.38■■□□□ 1.49
SLC6A12P48065 DUX4L15-201ENST00000611059 1267 ntBASIC24.38■■□□□ 1.49
SLC6A12P48065 DUX4L23-201ENST00000615195 1269 ntBASIC24.38■■□□□ 1.49
SLC6A12P48065 DUX4L24-201ENST00000617576 1269 ntBASIC24.38■■□□□ 1.49
SLC6A12P48065 DUX4L22-201ENST00000618238 1269 ntBASIC24.38■■□□□ 1.49
SLC6A12P48065 DUX4L20-201ENST00000619712 1269 ntBASIC24.38■■□□□ 1.49
SLC6A12P48065 DUX4L21-201ENST00000622058 1269 ntBASIC24.38■■□□□ 1.49
SLC6A12P48065 DUX4L10-201ENST00000622460 1267 ntBASIC24.38■■□□□ 1.49
SLC6A12P48065 DUX4L25-201ENST00000624915 1269 ntBASIC24.38■■□□□ 1.49
SLC6A12P48065 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SLC6A12P48065 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC6A12P48065 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC6A12P48065 DUX4L11-201ENST00000611504 1267 ntBASIC24.36■■□□□ 1.49
SLC6A12P48065 DUX4L12-201ENST00000614593 1267 ntBASIC24.36■■□□□ 1.49
SLC6A12P48065 DUX4L14-201ENST00000621227 1267 ntBASIC24.36■■□□□ 1.49
SLC6A12P48065 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC6A12P48065 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SLC6A12P48065 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.35■■□□□ 1.49
SLC6A12P48065 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC6A12P48065 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC6A12P48065 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.35■■□□□ 1.49
SLC6A12P48065 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SLC6A12P48065 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC6A12P48065 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC6A12P48065 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
SLC6A12P48065 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SLC6A12P48065 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
SLC6A12P48065 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
SLC6A12P48065 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.33■■□□□ 1.49
SLC6A12P48065 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.33■■□□□ 1.48
SLC6A12P48065 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
SLC6A12P48065 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC6A12P48065 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC6A12P48065 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC6A12P48065 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
SLC6A12P48065 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC6A12P48065 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC6A12P48065 ABHD17AP4-201ENST00000411545 909 ntBASIC24.32■■□□□ 1.48
SLC6A12P48065 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
SLC6A12P48065 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SLC6A12P48065 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.31■■□□□ 1.48
SLC6A12P48065 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SLC6A12P48065 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.3■■□□□ 1.48
SLC6A12P48065 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SLC6A12P48065 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC24.29■■□□□ 1.48
SLC6A12P48065 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.29■■□□□ 1.48
SLC6A12P48065 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.29■■□□□ 1.48
SLC6A12P48065 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.29■■□□□ 1.48
SLC6A12P48065 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC6A12P48065 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SLC6A12P48065 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SLC6A12P48065 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24.28■■□□□ 1.48
SLC6A12P48065 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
SLC6A12P48065 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SLC6A12P48065 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLC6A12P48065 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
SLC6A12P48065 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.26■■□□□ 1.47
SLC6A12P48065 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SLC6A12P48065 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
SLC6A12P48065 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.26■■□□□ 1.47
SLC6A12P48065 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLC6A12P48065 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.25■■□□□ 1.47
SLC6A12P48065 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SLC6A12P48065 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SLC6A12P48065 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SLC6A12P48065 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.25■■□□□ 1.47
SLC6A12P48065 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SLC6A12P48065 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.24■■□□□ 1.47
SLC6A12P48065 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC6A12P48065 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC6A12P48065 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.24■■□□□ 1.47
SLC6A12P48065 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SLC6A12P48065 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.24■■□□□ 1.47
SLC6A12P48065 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC24.23■■□□□ 1.47
SLC6A12P48065 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
SLC6A12P48065 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SLC6A12P48065 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
SLC6A12P48065 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms