Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PTPN6P29350 DUX4L29-201ENST00000425409 679 ntBASIC23.89■■□□□ 1.41
PTPN6P29350 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
PTPN6P29350 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTPN6P29350 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.88■■□□□ 1.41
PTPN6P29350 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.88■■□□□ 1.41
PTPN6P29350 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTPN6P29350 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PTPN6P29350 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PTPN6P29350 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTPN6P29350 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.87■■□□□ 1.41
PTPN6P29350 AC021231.2-201ENST00000594613 730 ntBASIC23.87■■□□□ 1.41
PTPN6P29350 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PTPN6P29350 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PTPN6P29350 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.86■■□□□ 1.41
PTPN6P29350 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTPN6P29350 LINC00273-201ENST00000539813 1452 ntBASIC23.86■■□□□ 1.41
PTPN6P29350 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.86■■□□□ 1.41
PTPN6P29350 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
PTPN6P29350 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.85■■□□□ 1.41
PTPN6P29350 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN6P29350 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PTPN6P29350 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN6P29350 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN6P29350 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN6P29350 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.84■■□□□ 1.41
PTPN6P29350 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN6P29350 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PTPN6P29350 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.84■■□□□ 1.41
PTPN6P29350 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PTPN6P29350 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.83■■□□□ 1.4
PTPN6P29350 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PTPN6P29350 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN6P29350 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PTPN6P29350 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.82■■□□□ 1.4
PTPN6P29350 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
PTPN6P29350 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
PTPN6P29350 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN6P29350 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PTPN6P29350 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN6P29350 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN6P29350 ZNRF2P2-203ENST00000454624 420 ntBASIC23.8■■□□□ 1.4
PTPN6P29350 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PTPN6P29350 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PTPN6P29350 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN6P29350 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN6P29350 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN6P29350 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PTPN6P29350 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN6P29350 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PTPN6P29350 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN6P29350 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN6P29350 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN6P29350 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
PTPN6P29350 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PTPN6P29350 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.78■■□□□ 1.4
PTPN6P29350 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.78■■□□□ 1.4
PTPN6P29350 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN6P29350 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PTPN6P29350 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PTPN6P29350 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
PTPN6P29350 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.77■■□□□ 1.4
PTPN6P29350 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.76■■□□□ 1.39
PTPN6P29350 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN6P29350 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN6P29350 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PTPN6P29350 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PTPN6P29350 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PTPN6P29350 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN6P29350 MIR7108-201ENST00000614319 87 ntBASIC23.75■■□□□ 1.39
PTPN6P29350 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.75■■□□□ 1.39
PTPN6P29350 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PTPN6P29350 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
PTPN6P29350 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PTPN6P29350 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN6P29350 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN6P29350 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
PTPN6P29350 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.74■■□□□ 1.39
PTPN6P29350 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
PTPN6P29350 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.74■■□□□ 1.39
PTPN6P29350 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.74■■□□□ 1.39
PTPN6P29350 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
PTPN6P29350 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PTPN6P29350 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
PTPN6P29350 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN6P29350 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PTPN6P29350 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
PTPN6P29350 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN6P29350 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN6P29350 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
PTPN6P29350 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
PTPN6P29350 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTPN6P29350 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PTPN6P29350 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.71■■□□□ 1.39
PTPN6P29350 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.71■■□□□ 1.39
PTPN6P29350 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.7■■□□□ 1.39
PTPN6P29350 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
PTPN6P29350 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PTPN6P29350 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC23.7■■□□□ 1.38
PTPN6P29350 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms