Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.37■■□□□ 1.17
PPP3CBP16298 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PPP3CBP16298 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
PPP3CBP16298 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.36■■□□□ 1.17
PPP3CBP16298 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PPP3CBP16298 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PPP3CBP16298 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PPP3CBP16298 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.35■■□□□ 1.17
PPP3CBP16298 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PPP3CBP16298 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PPP3CBP16298 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PPP3CBP16298 AC110285.7-201ENST00000624417 1536 ntBASIC22.35■■□□□ 1.17
PPP3CBP16298 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PPP3CBP16298 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.34■■□□□ 1.17
PPP3CBP16298 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PPP3CBP16298 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PPP3CBP16298 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
PPP3CBP16298 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PPP3CBP16298 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PPP3CBP16298 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC22.33■■□□□ 1.17
PPP3CBP16298 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PPP3CBP16298 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PPP3CBP16298 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
PPP3CBP16298 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPP3CBP16298 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.32■■□□□ 1.16
PPP3CBP16298 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PPP3CBP16298 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.32■■□□□ 1.16
PPP3CBP16298 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC22.32■■□□□ 1.16
PPP3CBP16298 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP3CBP16298 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
PPP3CBP16298 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
PPP3CBP16298 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.31■■□□□ 1.16
PPP3CBP16298 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP3CBP16298 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PPP3CBP16298 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC22.3■■□□□ 1.16
PPP3CBP16298 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PPP3CBP16298 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PPP3CBP16298 AP004833.2-201ENST00000532228 1454 ntBASIC22.29■■□□□ 1.16
PPP3CBP16298 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.29■■□□□ 1.16
PPP3CBP16298 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PPP3CBP16298 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
PPP3CBP16298 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PPP3CBP16298 GPX1-201ENST00000419349 1106 ntBASIC22.29■■□□□ 1.16
PPP3CBP16298 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PPP3CBP16298 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.29■■□□□ 1.16
PPP3CBP16298 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PPP3CBP16298 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP3CBP16298 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PPP3CBP16298 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.28■■□□□ 1.16
PPP3CBP16298 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
PPP3CBP16298 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP3CBP16298 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP3CBP16298 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PPP3CBP16298 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP3CBP16298 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.28■■□□□ 1.16
PPP3CBP16298 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PPP3CBP16298 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PPP3CBP16298 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PPP3CBP16298 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PPP3CBP16298 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PPP3CBP16298 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PPP3CBP16298 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PPP3CBP16298 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.27■■□□□ 1.16
PPP3CBP16298 AC148477.6-201ENST00000623746 465 ntBASIC22.27■■□□□ 1.16
PPP3CBP16298 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
PPP3CBP16298 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PPP3CBP16298 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PPP3CBP16298 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
PPP3CBP16298 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PPP3CBP16298 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PPP3CBP16298 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
PPP3CBP16298 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PPP3CBP16298 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PPP3CBP16298 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.26■■□□□ 1.15
PPP3CBP16298 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
PPP3CBP16298 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
PPP3CBP16298 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PPP3CBP16298 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.25■■□□□ 1.15
PPP3CBP16298 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.25■■□□□ 1.15
PPP3CBP16298 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
PPP3CBP16298 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PPP3CBP16298 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.25■■□□□ 1.15
PPP3CBP16298 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
PPP3CBP16298 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PPP3CBP16298 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PPP3CBP16298 RNF126P1-201ENST00000567452 1320 ntBASIC22.24■■□□□ 1.15
PPP3CBP16298 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PPP3CBP16298 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PPP3CBP16298 RARRES2P2-201ENST00000394842 485 ntBASIC22.23■■□□□ 1.15
PPP3CBP16298 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PPP3CBP16298 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.23■■□□□ 1.15
PPP3CBP16298 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PPP3CBP16298 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PPP3CBP16298 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPP3CBP16298 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.22■■□□□ 1.15
PPP3CBP16298 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
PPP3CBP16298 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PPP3CBP16298 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
PPP3CBP16298 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PPP3CBP16298 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 146.9 ms