Protein–RNA interactions for Protein: O00194

RAB27B, Ras-related protein Rab-27B, humanhuman

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB27BO00194 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB27BO00194 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB27BO00194 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RAB27BO00194 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.43■■□□□ 1.02
RAB27BO00194 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB27BO00194 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RAB27BO00194 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RAB27BO00194 AC135983.2-203ENST00000454486 1613 ntBASIC21.41■■□□□ 1.02
RAB27BO00194 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.41■■□□□ 1.02
RAB27BO00194 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC21.41■■□□□ 1.02
RAB27BO00194 AC136428.2-201ENST00000563187 214 ntBASIC21.41■■□□□ 1.02
RAB27BO00194 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RAB27BO00194 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RAB27BO00194 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.4■■□□□ 1.02
RAB27BO00194 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RAB27BO00194 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB27BO00194 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RAB27BO00194 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.39■■□□□ 1.02
RAB27BO00194 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
RAB27BO00194 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RAB27BO00194 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RAB27BO00194 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.39■■□□□ 1.01
RAB27BO00194 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.38■■□□□ 1.01
RAB27BO00194 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RAB27BO00194 AC145676.1-201ENST00000514988 2004 ntBASIC21.38■■□□□ 1.01
RAB27BO00194 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB27BO00194 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB27BO00194 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RAB27BO00194 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB27BO00194 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB27BO00194 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.37■■□□□ 1.01
RAB27BO00194 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RAB27BO00194 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RAB27BO00194 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
RAB27BO00194 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.36■■□□□ 1.01
RAB27BO00194 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RAB27BO00194 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
RAB27BO00194 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC21.35■■□□□ 1.01
RAB27BO00194 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RAB27BO00194 MIR762-201ENST00000390236 83 ntBASIC21.34■■□□□ 1.01
RAB27BO00194 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.34■■□□□ 1.01
RAB27BO00194 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.34■■□□□ 1.01
RAB27BO00194 WHAMMP2-203ENST00000563942 1603 ntBASIC21.33■■□□□ 1.01
RAB27BO00194 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RAB27BO00194 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.33■■□□□ 1.01
RAB27BO00194 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.33■■□□□ 1.01
RAB27BO00194 AC097358.2-201ENST00000607541 1159 ntBASIC21.33■■□□□ 1.01
RAB27BO00194 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RAB27BO00194 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.32■■□□□ 1
RAB27BO00194 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RAB27BO00194 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RAB27BO00194 AC020928.2-201ENST00000588717 2197 ntBASIC21.32■■□□□ 1
RAB27BO00194 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.32■■□□□ 1
RAB27BO00194 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB27BO00194 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.31■■□□□ 1
RAB27BO00194 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RAB27BO00194 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RAB27BO00194 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
RAB27BO00194 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.31■■□□□ 1
RAB27BO00194 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.31■■□□□ 1
RAB27BO00194 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RAB27BO00194 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
RAB27BO00194 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RAB27BO00194 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
RAB27BO00194 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RAB27BO00194 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB27BO00194 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB27BO00194 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.29■■□□□ 1
RAB27BO00194 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.29■■□□□ 1
RAB27BO00194 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
RAB27BO00194 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RAB27BO00194 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB27BO00194 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB27BO00194 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.29■■□□□ 1
RAB27BO00194 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.29■■□□□ 1
RAB27BO00194 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RAB27BO00194 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.29■■□□□ 1
RAB27BO00194 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
RAB27BO00194 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.28■■□□□ 1
RAB27BO00194 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.28■■□□□ 1
RAB27BO00194 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.28■■□□□ 1
RAB27BO00194 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.28■■□□□ 1
RAB27BO00194 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB27BO00194 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB27BO00194 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.28■■□□□ 1
RAB27BO00194 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB27BO00194 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB27BO00194 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB27BO00194 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAB27BO00194 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RAB27BO00194 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RAB27BO00194 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RAB27BO00194 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB27BO00194 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB27BO00194 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.26■□□□□ 0.99
RAB27BO00194 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB27BO00194 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RAB27BO00194 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB27BO00194 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RAB27BO00194 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms