Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 AC018358.1-201ENST00000631079 1402 ntBASIC18■□□□□ 0.47
LYRM9A8MSI8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
LYRM9A8MSI8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18■□□□□ 0.47
LYRM9A8MSI8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18■□□□□ 0.47
LYRM9A8MSI8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
LYRM9A8MSI8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
LYRM9A8MSI8 AC148477.6-201ENST00000623746 465 ntBASIC17.99■□□□□ 0.47
LYRM9A8MSI8 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYRM9A8MSI8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LYRM9A8MSI8 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LYRM9A8MSI8 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYRM9A8MSI8 AC142086.6-201ENST00000621154 1765 ntBASIC17.99■□□□□ 0.47
LYRM9A8MSI8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LYRM9A8MSI8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYRM9A8MSI8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.98■□□□□ 0.47
LYRM9A8MSI8 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.98■□□□□ 0.47
LYRM9A8MSI8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYRM9A8MSI8 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LYRM9A8MSI8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.98■□□□□ 0.47
LYRM9A8MSI8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LYRM9A8MSI8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
LYRM9A8MSI8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LYRM9A8MSI8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
LYRM9A8MSI8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LYRM9A8MSI8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.96■□□□□ 0.47
LYRM9A8MSI8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LYRM9A8MSI8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LYRM9A8MSI8 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LYRM9A8MSI8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC17.95■□□□□ 0.46
LYRM9A8MSI8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
LYRM9A8MSI8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LYRM9A8MSI8 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
LYRM9A8MSI8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.94■□□□□ 0.46
LYRM9A8MSI8 MIR4449-201ENST00000578365 66 ntBASIC17.94■□□□□ 0.46
LYRM9A8MSI8 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
LYRM9A8MSI8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LYRM9A8MSI8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LYRM9A8MSI8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYRM9A8MSI8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LYRM9A8MSI8 MIR219A2-201ENST00000608502 1504 ntBASIC17.93■□□□□ 0.46
LYRM9A8MSI8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LYRM9A8MSI8 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
LYRM9A8MSI8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYRM9A8MSI8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYRM9A8MSI8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYRM9A8MSI8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYRM9A8MSI8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
LYRM9A8MSI8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYRM9A8MSI8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYRM9A8MSI8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
LYRM9A8MSI8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
LYRM9A8MSI8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYRM9A8MSI8 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYRM9A8MSI8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYRM9A8MSI8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYRM9A8MSI8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.91■□□□□ 0.46
LYRM9A8MSI8 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
LYRM9A8MSI8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYRM9A8MSI8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
LYRM9A8MSI8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYRM9A8MSI8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
LYRM9A8MSI8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC17.91■□□□□ 0.46
LYRM9A8MSI8 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
LYRM9A8MSI8 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
LYRM9A8MSI8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYRM9A8MSI8 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.9■□□□□ 0.46
LYRM9A8MSI8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC17.9■□□□□ 0.46
LYRM9A8MSI8 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
LYRM9A8MSI8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.9■□□□□ 0.46
LYRM9A8MSI8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.9■□□□□ 0.46
LYRM9A8MSI8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
LYRM9A8MSI8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
LYRM9A8MSI8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYRM9A8MSI8 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
LYRM9A8MSI8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.89■□□□□ 0.45
LYRM9A8MSI8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.89■□□□□ 0.45
LYRM9A8MSI8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
LYRM9A8MSI8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.89■□□□□ 0.45
LYRM9A8MSI8 LINC01003-201ENST00000564834 1764 ntBASIC17.89■□□□□ 0.45
LYRM9A8MSI8 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
LYRM9A8MSI8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.88■□□□□ 0.45
LYRM9A8MSI8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYRM9A8MSI8 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.88■□□□□ 0.45
LYRM9A8MSI8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYRM9A8MSI8 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
LYRM9A8MSI8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYRM9A8MSI8 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC17.88■□□□□ 0.45
LYRM9A8MSI8 BX255925.1-201ENST00000566954 1854 ntBASIC17.88■□□□□ 0.45
LYRM9A8MSI8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
LYRM9A8MSI8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYRM9A8MSI8 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYRM9A8MSI8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYRM9A8MSI8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYRM9A8MSI8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYRM9A8MSI8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LYRM9A8MSI8 AC126177.7-201ENST00000547904 679 ntBASIC17.87■□□□□ 0.45
LYRM9A8MSI8 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYRM9A8MSI8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
LYRM9A8MSI8 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
LYRM9A8MSI8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms