Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
LINC01548A6NM66 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01548A6NM66 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LINC01548A6NM66 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01548A6NM66 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
LINC01548A6NM66 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.94■□□□□ 0.78
LINC01548A6NM66 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LINC01548A6NM66 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LINC01548A6NM66 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01548A6NM66 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC19.93■□□□□ 0.78
LINC01548A6NM66 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
LINC01548A6NM66 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01548A6NM66 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
LINC01548A6NM66 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.93■□□□□ 0.78
LINC01548A6NM66 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01548A6NM66 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
LINC01548A6NM66 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01548A6NM66 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01548A6NM66 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01548A6NM66 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.92■□□□□ 0.78
LINC01548A6NM66 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
LINC01548A6NM66 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.91■□□□□ 0.78
LINC01548A6NM66 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
LINC01548A6NM66 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
LINC01548A6NM66 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC19.91■□□□□ 0.78
LINC01548A6NM66 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LINC01548A6NM66 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
LINC01548A6NM66 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.9■□□□□ 0.78
LINC01548A6NM66 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
LINC01548A6NM66 MIR219A2-201ENST00000608502 1504 ntBASIC19.89■□□□□ 0.77
LINC01548A6NM66 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.89■□□□□ 0.77
LINC01548A6NM66 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01548A6NM66 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
LINC01548A6NM66 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01548A6NM66 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
LINC01548A6NM66 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
LINC01548A6NM66 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01548A6NM66 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01548A6NM66 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01548A6NM66 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01548A6NM66 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01548A6NM66 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01548A6NM66 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01548A6NM66 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
LINC01548A6NM66 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01548A6NM66 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01548A6NM66 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01548A6NM66 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01548A6NM66 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01548A6NM66 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.87■□□□□ 0.77
LINC01548A6NM66 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
LINC01548A6NM66 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
LINC01548A6NM66 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.86■□□□□ 0.77
LINC01548A6NM66 AC148477.6-201ENST00000623746 465 ntBASIC19.86■□□□□ 0.77
LINC01548A6NM66 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.86■□□□□ 0.77
LINC01548A6NM66 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.85■□□□□ 0.77
LINC01548A6NM66 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
LINC01548A6NM66 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LINC01548A6NM66 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
LINC01548A6NM66 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC01548A6NM66 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC01548A6NM66 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
LINC01548A6NM66 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LINC01548A6NM66 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LINC01548A6NM66 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.84■□□□□ 0.77
LINC01548A6NM66 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.84■□□□□ 0.77
LINC01548A6NM66 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LINC01548A6NM66 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
LINC01548A6NM66 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LINC01548A6NM66 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
LINC01548A6NM66 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LINC01548A6NM66 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LINC01548A6NM66 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LINC01548A6NM66 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LINC01548A6NM66 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC19.82■□□□□ 0.76
LINC01548A6NM66 SRP68-213ENST00000629930 165 ntTSL 5 BASIC19.82■□□□□ 0.76
LINC01548A6NM66 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LINC01548A6NM66 AC018358.1-201ENST00000631079 1402 ntBASIC19.82■□□□□ 0.76
LINC01548A6NM66 AC142086.6-201ENST00000621154 1765 ntBASIC19.82■□□□□ 0.76
LINC01548A6NM66 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.82■□□□□ 0.76
LINC01548A6NM66 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LINC01548A6NM66 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LINC01548A6NM66 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC19.81■□□□□ 0.76
LINC01548A6NM66 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC01548A6NM66 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LINC01548A6NM66 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.8■□□□□ 0.76
LINC01548A6NM66 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LINC01548A6NM66 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.8■□□□□ 0.76
LINC01548A6NM66 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LINC01548A6NM66 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01548A6NM66 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LINC01548A6NM66 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01548A6NM66 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
LINC01548A6NM66 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LINC01548A6NM66 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01548A6NM66 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.79■□□□□ 0.76
LINC01548A6NM66 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
LINC01548A6NM66 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01548A6NM66 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LINC01548A6NM66 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms