Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC39.6■■■■□ 3.93
PLEKHD1A6NEE1 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC39.59■■■■□ 3.93
PLEKHD1A6NEE1 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC39.58■■■■□ 3.93
PLEKHD1A6NEE1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC39.58■■■■□ 3.93
PLEKHD1A6NEE1 AL592293.1-201ENST00000502889 1188 ntBASIC39.58■■■■□ 3.93
PLEKHD1A6NEE1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC39.58■■■■□ 3.93
PLEKHD1A6NEE1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC39.58■■■■□ 3.93
PLEKHD1A6NEE1 HES4-204ENST00000484667 667 ntTSL 3 BASIC39.57■■■■□ 3.93
PLEKHD1A6NEE1 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC39.57■■■■□ 3.93
PLEKHD1A6NEE1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC39.57■■■■□ 3.92
PLEKHD1A6NEE1 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
PLEKHD1A6NEE1 AC009831.1-201ENST00000580420 1582 ntBASIC39.56■■■■□ 3.92
PLEKHD1A6NEE1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC39.56■■■■□ 3.92
PLEKHD1A6NEE1 AC133552.2-201ENST00000619106 1032 ntBASIC39.55■■■■□ 3.92
PLEKHD1A6NEE1 REST-210ENST00000638187 1334 ntTSL 5 BASIC39.55■■■■□ 3.92
PLEKHD1A6NEE1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC39.55■■■■□ 3.92
PLEKHD1A6NEE1 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC39.54■■■■□ 3.92
PLEKHD1A6NEE1 DUX4L18-201ENST00000553347 1267 ntBASIC39.53■■■■□ 3.92
PLEKHD1A6NEE1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC39.53■■■■□ 3.92
PLEKHD1A6NEE1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC39.53■■■■□ 3.92
PLEKHD1A6NEE1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC39.52■■■■□ 3.92
PLEKHD1A6NEE1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC39.51■■■■□ 3.92
PLEKHD1A6NEE1 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC39.51■■■■□ 3.92
PLEKHD1A6NEE1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC39.5■■■■□ 3.91
PLEKHD1A6NEE1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC39.5■■■■□ 3.91
PLEKHD1A6NEE1 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC39.5■■■■□ 3.91
PLEKHD1A6NEE1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC39.49■■■■□ 3.91
PLEKHD1A6NEE1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC39.49■■■■□ 3.91
PLEKHD1A6NEE1 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC39.49■■■■□ 3.91
PLEKHD1A6NEE1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC39.48■■■■□ 3.91
PLEKHD1A6NEE1 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC39.48■■■■□ 3.91
PLEKHD1A6NEE1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC39.46■■■■□ 3.91
PLEKHD1A6NEE1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC39.46■■■■□ 3.91
PLEKHD1A6NEE1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC39.46■■■■□ 3.91
PLEKHD1A6NEE1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC39.46■■■■□ 3.91
PLEKHD1A6NEE1 SMPD5-203ENST00000639008 1464 ntBASIC39.45■■■■□ 3.91
PLEKHD1A6NEE1 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC39.45■■■■□ 3.91
PLEKHD1A6NEE1 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC39.44■■■■□ 3.9
PLEKHD1A6NEE1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC39.44■■■■□ 3.9
PLEKHD1A6NEE1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC39.44■■■■□ 3.9
PLEKHD1A6NEE1 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC39.44■■■■□ 3.9
PLEKHD1A6NEE1 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC39.43■■■■□ 3.9
PLEKHD1A6NEE1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC39.42■■■■□ 3.9
PLEKHD1A6NEE1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC39.42■■■■□ 3.9
PLEKHD1A6NEE1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC39.42■■■■□ 3.9
PLEKHD1A6NEE1 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC39.42■■■■□ 3.9
PLEKHD1A6NEE1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
PLEKHD1A6NEE1 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC39.41■■■■□ 3.9
PLEKHD1A6NEE1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC39.41■■■■□ 3.9
PLEKHD1A6NEE1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC39.41■■■■□ 3.9
PLEKHD1A6NEE1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC39.4■■■■□ 3.9
PLEKHD1A6NEE1 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC39.4■■■■□ 3.9
PLEKHD1A6NEE1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC39.4■■■■□ 3.9
PLEKHD1A6NEE1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC39.4■■■■□ 3.9
PLEKHD1A6NEE1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC39.4■■■■□ 3.9
PLEKHD1A6NEE1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC39.4■■■■□ 3.9
PLEKHD1A6NEE1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC39.4■■■■□ 3.9
PLEKHD1A6NEE1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC39.39■■■■□ 3.9
PLEKHD1A6NEE1 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC39.39■■■■□ 3.9
PLEKHD1A6NEE1 AC026202.3-201ENST00000600805 1127 ntBASIC39.39■■■■□ 3.9
PLEKHD1A6NEE1 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
PLEKHD1A6NEE1 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC39.39■■■■□ 3.9
PLEKHD1A6NEE1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC39.39■■■■□ 3.9
PLEKHD1A6NEE1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC39.38■■■■□ 3.89
PLEKHD1A6NEE1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC39.38■■■■□ 3.89
PLEKHD1A6NEE1 AL035685.1-201ENST00000636663 812 ntBASIC39.38■■■■□ 3.89
PLEKHD1A6NEE1 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC39.38■■■■□ 3.89
PLEKHD1A6NEE1 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC39.38■■■■□ 3.89
PLEKHD1A6NEE1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC39.37■■■■□ 3.89
PLEKHD1A6NEE1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC39.36■■■■□ 3.89
PLEKHD1A6NEE1 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC39.36■■■■□ 3.89
PLEKHD1A6NEE1 AP004833.2-201ENST00000532228 1454 ntBASIC39.36■■■■□ 3.89
PLEKHD1A6NEE1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC39.35■■■■□ 3.89
PLEKHD1A6NEE1 AL451085.2-201ENST00000605085 799 ntBASIC39.35■■■■□ 3.89
PLEKHD1A6NEE1 AL359258.2-201ENST00000564063 1566 ntBASIC39.34■■■■□ 3.89
PLEKHD1A6NEE1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC39.34■■■■□ 3.89
PLEKHD1A6NEE1 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC39.33■■■■□ 3.89
PLEKHD1A6NEE1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC39.33■■■■□ 3.89
PLEKHD1A6NEE1 AC025884.2-201ENST00000553429 711 ntBASIC39.32■■■■□ 3.89
PLEKHD1A6NEE1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC39.32■■■■□ 3.89
PLEKHD1A6NEE1 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC39.32■■■■□ 3.88
PLEKHD1A6NEE1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC39.31■■■■□ 3.88
PLEKHD1A6NEE1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC39.3■■■■□ 3.88
PLEKHD1A6NEE1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC39.3■■■■□ 3.88
PLEKHD1A6NEE1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC39.29■■■■□ 3.88
PLEKHD1A6NEE1 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC39.27■■■■□ 3.88
PLEKHD1A6NEE1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC39.27■■■■□ 3.88
PLEKHD1A6NEE1 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC39.27■■■■□ 3.88
PLEKHD1A6NEE1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC39.27■■■■□ 3.88
PLEKHD1A6NEE1 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC39.26■■■■□ 3.88
PLEKHD1A6NEE1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
PLEKHD1A6NEE1 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC39.26■■■■□ 3.88
PLEKHD1A6NEE1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC39.26■■■■□ 3.88
PLEKHD1A6NEE1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC39.26■■■■□ 3.87
PLEKHD1A6NEE1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC39.25■■■■□ 3.87
PLEKHD1A6NEE1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC39.25■■■■□ 3.87
PLEKHD1A6NEE1 DUX4L9-201ENST00000449051 1259 ntBASIC39.25■■■■□ 3.87
PLEKHD1A6NEE1 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC39.25■■■■□ 3.87
PLEKHD1A6NEE1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC39.24■■■■□ 3.87
PLEKHD1A6NEE1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC39.24■■■■□ 3.87
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms