Protein–RNA interactions for Protein: A0A0C4DH25

IGKV3D-20, Immunoglobulin kappa variable 3D-20, humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-20A0A0C4DH25 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
IGKV3D-20A0A0C4DH25 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.6■□□□□ 0.57
IGKV3D-20A0A0C4DH25 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.6■□□□□ 0.57
IGKV3D-20A0A0C4DH25 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.6■□□□□ 0.57
IGKV3D-20A0A0C4DH25 AC097358.2-201ENST00000607541 1159 ntBASIC18.6■□□□□ 0.57
IGKV3D-20A0A0C4DH25 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IGKV3D-20A0A0C4DH25 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.59■□□□□ 0.57
IGKV3D-20A0A0C4DH25 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IGKV3D-20A0A0C4DH25 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IGKV3D-20A0A0C4DH25 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IGKV3D-20A0A0C4DH25 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IGKV3D-20A0A0C4DH25 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
IGKV3D-20A0A0C4DH25 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IGKV3D-20A0A0C4DH25 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
IGKV3D-20A0A0C4DH25 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
IGKV3D-20A0A0C4DH25 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IGKV3D-20A0A0C4DH25 AC018358.1-201ENST00000631079 1402 ntBASIC18.58■□□□□ 0.57
IGKV3D-20A0A0C4DH25 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
IGKV3D-20A0A0C4DH25 AC091060.1-201ENST00000623524 1766 ntBASIC18.58■□□□□ 0.57
IGKV3D-20A0A0C4DH25 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.58■□□□□ 0.56
IGKV3D-20A0A0C4DH25 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IGKV3D-20A0A0C4DH25 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
IGKV3D-20A0A0C4DH25 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGKV3D-20A0A0C4DH25 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
IGKV3D-20A0A0C4DH25 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.57■□□□□ 0.56
IGKV3D-20A0A0C4DH25 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
IGKV3D-20A0A0C4DH25 MIR762-201ENST00000390236 83 ntBASIC18.57■□□□□ 0.56
IGKV3D-20A0A0C4DH25 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC18.57■□□□□ 0.56
IGKV3D-20A0A0C4DH25 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGKV3D-20A0A0C4DH25 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
IGKV3D-20A0A0C4DH25 AC135983.2-203ENST00000454486 1613 ntBASIC18.56■□□□□ 0.56
IGKV3D-20A0A0C4DH25 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IGKV3D-20A0A0C4DH25 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.55■□□□□ 0.56
IGKV3D-20A0A0C4DH25 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
IGKV3D-20A0A0C4DH25 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IGKV3D-20A0A0C4DH25 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
IGKV3D-20A0A0C4DH25 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
IGKV3D-20A0A0C4DH25 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
IGKV3D-20A0A0C4DH25 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
IGKV3D-20A0A0C4DH25 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.54■□□□□ 0.56
IGKV3D-20A0A0C4DH25 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IGKV3D-20A0A0C4DH25 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IGKV3D-20A0A0C4DH25 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
IGKV3D-20A0A0C4DH25 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
IGKV3D-20A0A0C4DH25 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.53■□□□□ 0.56
IGKV3D-20A0A0C4DH25 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
IGKV3D-20A0A0C4DH25 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.53■□□□□ 0.56
IGKV3D-20A0A0C4DH25 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
IGKV3D-20A0A0C4DH25 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.53■□□□□ 0.56
IGKV3D-20A0A0C4DH25 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
IGKV3D-20A0A0C4DH25 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.53■□□□□ 0.56
IGKV3D-20A0A0C4DH25 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
IGKV3D-20A0A0C4DH25 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
IGKV3D-20A0A0C4DH25 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.53■□□□□ 0.56
IGKV3D-20A0A0C4DH25 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.52■□□□□ 0.56
IGKV3D-20A0A0C4DH25 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
IGKV3D-20A0A0C4DH25 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
IGKV3D-20A0A0C4DH25 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.52■□□□□ 0.56
IGKV3D-20A0A0C4DH25 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.52■□□□□ 0.56
IGKV3D-20A0A0C4DH25 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
IGKV3D-20A0A0C4DH25 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.52■□□□□ 0.56
IGKV3D-20A0A0C4DH25 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
IGKV3D-20A0A0C4DH25 WHAMMP2-203ENST00000563942 1603 ntBASIC18.51■□□□□ 0.55
IGKV3D-20A0A0C4DH25 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGKV3D-20A0A0C4DH25 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGKV3D-20A0A0C4DH25 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC18.5■□□□□ 0.55
IGKV3D-20A0A0C4DH25 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IGKV3D-20A0A0C4DH25 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGKV3D-20A0A0C4DH25 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
IGKV3D-20A0A0C4DH25 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGKV3D-20A0A0C4DH25 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.5■□□□□ 0.55
IGKV3D-20A0A0C4DH25 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.5■□□□□ 0.55
IGKV3D-20A0A0C4DH25 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
IGKV3D-20A0A0C4DH25 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV3D-20A0A0C4DH25 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV3D-20A0A0C4DH25 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV3D-20A0A0C4DH25 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV3D-20A0A0C4DH25 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
IGKV3D-20A0A0C4DH25 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.48■□□□□ 0.55
IGKV3D-20A0A0C4DH25 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV3D-20A0A0C4DH25 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
IGKV3D-20A0A0C4DH25 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGKV3D-20A0A0C4DH25 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
IGKV3D-20A0A0C4DH25 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.47■□□□□ 0.55
IGKV3D-20A0A0C4DH25 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.47■□□□□ 0.55
IGKV3D-20A0A0C4DH25 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC18.47■□□□□ 0.55
IGKV3D-20A0A0C4DH25 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGKV3D-20A0A0C4DH25 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
IGKV3D-20A0A0C4DH25 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
IGKV3D-20A0A0C4DH25 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGKV3D-20A0A0C4DH25 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
IGKV3D-20A0A0C4DH25 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGKV3D-20A0A0C4DH25 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
IGKV3D-20A0A0C4DH25 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.46■□□□□ 0.55
IGKV3D-20A0A0C4DH25 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.46■□□□□ 0.55
IGKV3D-20A0A0C4DH25 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGKV3D-20A0A0C4DH25 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
IGKV3D-20A0A0C4DH25 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
IGKV3D-20A0A0C4DH25 AC145676.1-201ENST00000514988 2004 ntBASIC18.45■□□□□ 0.54
IGKV3D-20A0A0C4DH25 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms