Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC091060.1-201ENST00000623524 1766 ntBASIC23.74■■□□□ 1.39
TRBV5-3A0A0A0MS03 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.74■■□□□ 1.39
TRBV5-3A0A0A0MS03 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
TRBV5-3A0A0A0MS03 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRBV5-3A0A0A0MS03 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.73■■□□□ 1.39
TRBV5-3A0A0A0MS03 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRBV5-3A0A0A0MS03 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRBV5-3A0A0A0MS03 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
TRBV5-3A0A0A0MS03 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRBV5-3A0A0A0MS03 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
TRBV5-3A0A0A0MS03 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRBV5-3A0A0A0MS03 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRBV5-3A0A0A0MS03 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.71■■□□□ 1.39
TRBV5-3A0A0A0MS03 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRBV5-3A0A0A0MS03 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRBV5-3A0A0A0MS03 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC23.7■■□□□ 1.38
TRBV5-3A0A0A0MS03 DUX4L28-201ENST00000623687 678 ntBASIC23.7■■□□□ 1.38
TRBV5-3A0A0A0MS03 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
TRBV5-3A0A0A0MS03 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRBV5-3A0A0A0MS03 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC23.69■■□□□ 1.38
TRBV5-3A0A0A0MS03 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRBV5-3A0A0A0MS03 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRBV5-3A0A0A0MS03 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TRBV5-3A0A0A0MS03 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRBV5-3A0A0A0MS03 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRBV5-3A0A0A0MS03 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.68■■□□□ 1.38
TRBV5-3A0A0A0MS03 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
TRBV5-3A0A0A0MS03 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRBV5-3A0A0A0MS03 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRBV5-3A0A0A0MS03 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.66■■□□□ 1.38
TRBV5-3A0A0A0MS03 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRBV5-3A0A0A0MS03 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.66■■□□□ 1.38
TRBV5-3A0A0A0MS03 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
TRBV5-3A0A0A0MS03 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRBV5-3A0A0A0MS03 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRBV5-3A0A0A0MS03 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRBV5-3A0A0A0MS03 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.64■■□□□ 1.37
TRBV5-3A0A0A0MS03 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.64■■□□□ 1.37
TRBV5-3A0A0A0MS03 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRBV5-3A0A0A0MS03 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRBV5-3A0A0A0MS03 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRBV5-3A0A0A0MS03 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
TRBV5-3A0A0A0MS03 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC23.62■■□□□ 1.37
TRBV5-3A0A0A0MS03 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRBV5-3A0A0A0MS03 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRBV5-3A0A0A0MS03 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRBV5-3A0A0A0MS03 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.62■■□□□ 1.37
TRBV5-3A0A0A0MS03 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRBV5-3A0A0A0MS03 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRBV5-3A0A0A0MS03 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRBV5-3A0A0A0MS03 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.61■■□□□ 1.37
TRBV5-3A0A0A0MS03 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.61■■□□□ 1.37
TRBV5-3A0A0A0MS03 AC135731.1-201ENST00000569415 2548 ntBASIC23.61■■□□□ 1.37
TRBV5-3A0A0A0MS03 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.6■■□□□ 1.37
TRBV5-3A0A0A0MS03 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRBV5-3A0A0A0MS03 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRBV5-3A0A0A0MS03 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRBV5-3A0A0A0MS03 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRBV5-3A0A0A0MS03 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.59■■□□□ 1.37
TRBV5-3A0A0A0MS03 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.59■■□□□ 1.37
TRBV5-3A0A0A0MS03 AC145676.1-201ENST00000514988 2004 ntBASIC23.59■■□□□ 1.37
TRBV5-3A0A0A0MS03 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TRBV5-3A0A0A0MS03 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.58■■□□□ 1.37
TRBV5-3A0A0A0MS03 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
TRBV5-3A0A0A0MS03 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.57■■□□□ 1.36
TRBV5-3A0A0A0MS03 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.57■■□□□ 1.36
TRBV5-3A0A0A0MS03 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.57■■□□□ 1.36
TRBV5-3A0A0A0MS03 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRBV5-3A0A0A0MS03 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.56■■□□□ 1.36
TRBV5-3A0A0A0MS03 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.56■■□□□ 1.36
TRBV5-3A0A0A0MS03 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
TRBV5-3A0A0A0MS03 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRBV5-3A0A0A0MS03 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC23.55■■□□□ 1.36
TRBV5-3A0A0A0MS03 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC23.55■■□□□ 1.36
TRBV5-3A0A0A0MS03 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.55■■□□□ 1.36
TRBV5-3A0A0A0MS03 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRBV5-3A0A0A0MS03 MIR3665-201ENST00000578708 105 ntBASIC23.54■■□□□ 1.36
TRBV5-3A0A0A0MS03 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV5-3A0A0A0MS03 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRBV5-3A0A0A0MS03 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC23.54■■□□□ 1.36
TRBV5-3A0A0A0MS03 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
TRBV5-3A0A0A0MS03 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC23.53■■□□□ 1.36
TRBV5-3A0A0A0MS03 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
TRBV5-3A0A0A0MS03 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRBV5-3A0A0A0MS03 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
TRBV5-3A0A0A0MS03 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRBV5-3A0A0A0MS03 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRBV5-3A0A0A0MS03 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRBV5-3A0A0A0MS03 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRBV5-3A0A0A0MS03 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.51■■□□□ 1.35
TRBV5-3A0A0A0MS03 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.51■■□□□ 1.35
TRBV5-3A0A0A0MS03 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRBV5-3A0A0A0MS03 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.51■■□□□ 1.35
TRBV5-3A0A0A0MS03 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRBV5-3A0A0A0MS03 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.51■■□□□ 1.35
TRBV5-3A0A0A0MS03 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.5■■□□□ 1.35
TRBV5-3A0A0A0MS03 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRBV5-3A0A0A0MS03 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRBV5-3A0A0A0MS03 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.49■■□□□ 1.35
TRBV5-3A0A0A0MS03 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms