RNA–Protein interactions for RNA: tR(CCU)J

HSX1, Transcript of Arginine tRNA (tRNA-Arg), predicted by tRNAscan-SE analysis, yeastyeast

Gene HSX1, Length 72 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSX1tR(CCU)J MON2P48563 1636 aaPredicted RBP10.74□□□□□ -0.69
HSX1tR(CCU)J INO80P53115 1489 aa10.66□□□□□ -0.7
HSX1tR(CCU)J SGS1P35187 1447 aa10.53□□□□□ -0.72
HSX1tR(CCU)J TCB3Q03640 1545 aaKnown RBP10.49□□□□□ -0.73
HSX1tR(CCU)J TY1B-DR4Q07793 1604 aa10.43□□□□□ -0.74
HSX1tR(CCU)J SWR1Q05471 1514 aa10.34□□□□□ -0.75
HSX1tR(CCU)J DNA2P38859 1522 aa10.19□□□□□ -0.78
HSX1tR(CCU)J HSL1P34244 1518 aa10.12□□□□□ -0.79
HSX1tR(CCU)J KOG1P38873 1557 aa10.11□□□□□ -0.79
HSX1tR(CCU)J SPT6P23615 1451 aaKnown RBP10.08□□□□□ -0.8
HSX1tR(CCU)J SPA2P23201 1466 aaKnown RBP9.98□□□□□ -0.81
HSX1tR(CCU)J HIR3P47171 1648 aa9.9□□□□□ -0.82
HSX1tR(CCU)J SSN2P38931 1420 aa9.86□□□□□ -0.83
HSX1tR(CCU)J XRN1P22147 1528 aaKnown RBP9.76□□□□□ -0.85
HSX1tR(CCU)J THO2P53552 1597 aaKnown RBP9.74□□□□□ -0.85
HSX1tR(CCU)J ECM5Q03214 1411 aa9.71□□□□□ -0.86
HSX1tR(CCU)J BUD4P47136 1447 aa9.7□□□□□ -0.86
HSX1tR(CCU)J REV3P14284 1504 aa9.61□□□□□ -0.87
HSX1tR(CCU)J RSE1Q04693 1361 aaKnown RBP9.58□□□□□ -0.88
HSX1tR(CCU)J MDS3P53094 1487 aa9.58□□□□□ -0.88
HSX1tR(CCU)J SIN3P22579 1536 aa9.56□□□□□ -0.88
HSX1tR(CCU)J PEP1P32319 1579 aa9.54□□□□□ -0.88
HSX1tR(CCU)J ATG2P53855 1592 aa9.54□□□□□ -0.88
HSX1tR(CCU)J DRS1P32892 752 aaKnown RBP9.5□□□□□ -0.89
HSX1tR(CCU)J SSK2P53599 1579 aa9.46□□□□□ -0.89
HSX1tR(CCU)J TAF2P23255 1407 aa9.42□□□□□ -0.9
HSX1tR(CCU)J ESP1Q03018 1630 aa9.4□□□□□ -0.9
HSX1tR(CCU)J SKI3P17883 1432 aaKnown RBP9.37□□□□□ -0.91
HSX1tR(CCU)J MYO2P19524 1574 aaKnown RBP9.31□□□□□ -0.92
HSX1tR(CCU)J YPK9Q12697 1472 aa9.29□□□□□ -0.92
HSX1tR(CCU)J BPT1P14772 1559 aa9.29□□□□□ -0.92
HSX1tR(CCU)J SCC2Q04002 1493 aa9.23□□□□□ -0.93
HSX1tR(CCU)J UFD4P33202 1483 aa9.21□□□□□ -0.93
HSX1tR(CCU)J RPO31P04051 1460 aa9.2□□□□□ -0.94
HSX1tR(CCU)J MTC1P47018 478 aaKnown RBP9.18□□□□□ -0.94
HSX1tR(CCU)J YCF1P39109 1515 aaKnown RBP9.15□□□□□ -0.95
HSX1tR(CCU)J TY2B-LR1P0C2J3 1770 aa9.11□□□□□ -0.95
HSX1tR(CCU)J TY2B-FP0CX63 1770 aa9.11□□□□□ -0.95
HSX1tR(CCU)J TY2B-GR2P0CX64 1770 aa9.11□□□□□ -0.95
HSX1tR(CCU)J TY2B-CP25384 1770 aa9.11□□□□□ -0.95
HSX1tR(CCU)J TY2B-DR2Q03494 1770 aa9.11□□□□□ -0.95
HSX1tR(CCU)J TY1B-DR1Q03855 1755 aa9.11□□□□□ -0.95
HSX1tR(CCU)J TY2B-DR3Q07791 1770 aaKnown RBP9.11□□□□□ -0.95
HSX1tR(CCU)J TY2B-OR1Q12113 1770 aa9.11□□□□□ -0.95
HSX1tR(CCU)J TY2B-DR1Q12472 1770 aa9.11□□□□□ -0.95
HSX1tR(CCU)J TY2B-OR2Q12501 1770 aa9.11□□□□□ -0.95
HSX1tR(CCU)J POL1P13382 1468 aa9.09□□□□□ -0.95
HSX1tR(CCU)J TOP2P06786 1428 aaKnown RBP9.07□□□□□ -0.96
HSX1tR(CCU)J RKR1Q04781 1562 aa9.05□□□□□ -0.96
HSX1tR(CCU)J CDC25P04821 1589 aa9.03□□□□□ -0.96
HSX1tR(CCU)J CHD1P32657 1468 aa9.03□□□□□ -0.96
HSX1tR(CCU)J TY1B-BRQ12193 1756 aa9.03□□□□□ -0.96
HSX1tR(CCU)J TY1B-GR3Q12316 1755 aa9.03□□□□□ -0.96
HSX1tR(CCU)J TY1B-ORQ92393 1755 aa9.03□□□□□ -0.96
HSX1tR(CCU)J TY1B-DR3Q99231 1755 aa9.01□□□□□ -0.97
HSX1tR(CCU)J TY2B-BQ12491 1770 aa9□□□□□ -0.97
HSX1tR(CCU)J STU1P38198 1513 aa9□□□□□ -0.97
HSX1tR(CCU)J YOR1P53049 1477 aa8.99□□□□□ -0.97
HSX1tR(CCU)J TY1B-HO13535 1793 aa8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-DR5P0C2I2 1755 aa8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-DR6P0C2I3 1755 aa8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-LR2P0C2I5 1755 aa8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-LR3P0C2I6 1755 aaKnown RBP8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-PR1P0C2I9 1755 aaKnown RBP8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-PR2P0C2J0 1756 aa8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-PR3P0C2J1 1755 aaKnown RBP8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-JR1P47098 1755 aa8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-ML2Q03434 1755 aaKnown RBP8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-ER1Q03612 1755 aa8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-ML1Q04711 1755 aaKnown RBP8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-GR2Q12269 1755 aa8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-OLQ12273 1755 aa8.98□□□□□ -0.97
HSX1tR(CCU)J TY1B-PLQ12414 1755 aaKnown RBP8.98□□□□□ -0.97
HSX1tR(CCU)J SMC4Q12267 1418 aa8.97□□□□□ -0.97
HSX1tR(CCU)J PAN1P32521 1480 aa8.96□□□□□ -0.97
HSX1tR(CCU)J DNF1P32660 1571 aa8.95□□□□□ -0.98
HSX1tR(CCU)J ESC1Q03661 1658 aaKnown RBP8.94□□□□□ -0.98
HSX1tR(CCU)J MMS22Q06164 1454 aa8.93□□□□□ -0.98
HSX1tR(CCU)J RPA190P10964 1664 aaKnown RBP8.9□□□□□ -0.98
HSX1tR(CCU)J MET5P47169 1442 aa8.88□□□□□ -0.99
HSX1tR(CCU)J RQC2Q12532 1038 aaKnown RBP8.88□□□□□ -0.99
HSX1tR(CCU)J SPP41P38904 1435 aa8.87□□□□□ -0.99
HSX1tR(CCU)J YTA7P40340 1379 aa8.86□□□□□ -0.99
HSX1tR(CCU)J MYO4P32492 1471 aa8.84□□□□□ -0.99
HSX1tR(CCU)J TY1B-JR2P47100 1755 aaKnown RBP8.81□□□□□ -1
HSX1tR(CCU)J TY1B-ER2Q03619 1755 aa8.81□□□□□ -1
HSX1tR(CCU)J TY1B-MR1Q04214 1755 aa8.81□□□□□ -1
HSX1tR(CCU)J TY1B-MR2Q04670 1755 aaKnown RBP8.81□□□□□ -1
HSX1tR(CCU)J TY1B-LR1Q12088 1755 aaKnown RBP8.81□□□□□ -1
HSX1tR(CCU)J TY1B-NL1Q12112 1755 aa8.81□□□□□ -1
HSX1tR(CCU)J TY1B-GR1Q12141 1755 aa8.81□□□□□ -1
HSX1tR(CCU)J TY1B-BLQ12490 1755 aa8.81□□□□□ -1
HSX1tR(CCU)J TSC11P40061 1430 aa8.81□□□□□ -1
HSX1tR(CCU)J TRM732Q03496 1420 aa8.81□□□□□ -1
HSX1tR(CCU)J VTH1P40438 1549 aa8.8□□□□□ -1
HSX1tR(CCU)J VTH2P40890 1549 aa8.8□□□□□ -1
HSX1tR(CCU)J NTE1Q04958 1679 aa8.75□□□□□ -1.01
HSX1tR(CCU)J NUP159P40477 1460 aa8.73□□□□□ -1.01
HSX1tR(CCU)J RPO21P04050 1733 aaKnown RBP8.72□□□□□ -1.01
HSX1tR(CCU)J LTE1P07866 1435 aa8.71□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms