RNA–Protein interactions for RNA: tA(AGC)G

tA(AGC)G, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeastyeast

Gene tA(AGC)G, Length 73 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
tA(AGC)GtA(AGC)G INO80P53115 1489 aa17.16■□□□□ 0.34
tA(AGC)GtA(AGC)G MON2P48563 1636 aaPredicted RBP17.15■□□□□ 0.34
tA(AGC)GtA(AGC)G TCB3Q03640 1545 aaKnown RBP16.45■□□□□ 0.22
tA(AGC)GtA(AGC)G SWR1Q05471 1514 aa16.44■□□□□ 0.22
tA(AGC)GtA(AGC)G SGS1P35187 1447 aa16.4■□□□□ 0.22
tA(AGC)GtA(AGC)G DNA2P38859 1522 aa16.37■□□□□ 0.21
tA(AGC)GtA(AGC)G TY1B-DR4Q07793 1604 aa16.37■□□□□ 0.21
tA(AGC)GtA(AGC)G KOG1P38873 1557 aa16.11■□□□□ 0.17
tA(AGC)GtA(AGC)G HSL1P34244 1518 aa15.85■□□□□ 0.13
tA(AGC)GtA(AGC)G SPT6P23615 1451 aaKnown RBP15.84■□□□□ 0.13
tA(AGC)GtA(AGC)G SPA2P23201 1466 aaKnown RBP15.68■□□□□ 0.1
tA(AGC)GtA(AGC)G RSE1Q04693 1361 aaKnown RBP15.63■□□□□ 0.09
tA(AGC)GtA(AGC)G HIR3P47171 1648 aa15.53■□□□□ 0.08
tA(AGC)GtA(AGC)G ECM5Q03214 1411 aa15.45■□□□□ 0.06
tA(AGC)GtA(AGC)G BUD4P47136 1447 aa15.32■□□□□ 0.04
tA(AGC)GtA(AGC)G THO2P53552 1597 aaKnown RBP15.3■□□□□ 0.04
tA(AGC)GtA(AGC)G XRN1P22147 1528 aaKnown RBP15.29■□□□□ 0.04
tA(AGC)GtA(AGC)G SSN2P38931 1420 aa15.19■□□□□ 0.02
tA(AGC)GtA(AGC)G MDS3P53094 1487 aa15.14■□□□□ 0.01
tA(AGC)GtA(AGC)G PEP1P32319 1579 aa15.03■□□□□ -0
tA(AGC)GtA(AGC)G REV3P14284 1504 aa15□□□□□ -0.01
tA(AGC)GtA(AGC)G MTC1P47018 478 aaKnown RBP14.97□□□□□ -0.01
tA(AGC)GtA(AGC)G ATG2P53855 1592 aa14.96□□□□□ -0.01
tA(AGC)GtA(AGC)G TAF2P23255 1407 aa14.88□□□□□ -0.03
tA(AGC)GtA(AGC)G SIN3P22579 1536 aa14.81□□□□□ -0.04
tA(AGC)GtA(AGC)G SKI3P17883 1432 aaKnown RBP14.79□□□□□ -0.04
tA(AGC)GtA(AGC)G BPT1P14772 1559 aa14.73□□□□□ -0.05
tA(AGC)GtA(AGC)G DRS1P32892 752 aaKnown RBP14.71□□□□□ -0.05
tA(AGC)GtA(AGC)G SSK2P53599 1579 aa14.7□□□□□ -0.06
tA(AGC)GtA(AGC)G ESP1Q03018 1630 aa14.63□□□□□ -0.07
tA(AGC)GtA(AGC)G UFD4P33202 1483 aa14.5□□□□□ -0.09
tA(AGC)GtA(AGC)G YCF1P39109 1515 aaKnown RBP14.48□□□□□ -0.09
tA(AGC)GtA(AGC)G YPK9Q12697 1472 aa14.45□□□□□ -0.1
tA(AGC)GtA(AGC)G SCC2Q04002 1493 aa14.44□□□□□ -0.1
tA(AGC)GtA(AGC)G MYO2P19524 1574 aaKnown RBP14.41□□□□□ -0.1
tA(AGC)GtA(AGC)G RPO31P04051 1460 aa14.36□□□□□ -0.11
tA(AGC)GtA(AGC)G TY2B-LR1P0C2J3 1770 aa14.23□□□□□ -0.13
tA(AGC)GtA(AGC)G TY2B-FP0CX63 1770 aa14.23□□□□□ -0.13
tA(AGC)GtA(AGC)G TY2B-GR2P0CX64 1770 aa14.23□□□□□ -0.13
tA(AGC)GtA(AGC)G TY2B-CP25384 1770 aa14.23□□□□□ -0.13
tA(AGC)GtA(AGC)G TY2B-DR2Q03494 1770 aa14.23□□□□□ -0.13
tA(AGC)GtA(AGC)G TY1B-DR1Q03855 1755 aa14.23□□□□□ -0.13
tA(AGC)GtA(AGC)G TY2B-DR3Q07791 1770 aaKnown RBP14.23□□□□□ -0.13
tA(AGC)GtA(AGC)G TY2B-OR1Q12113 1770 aa14.23□□□□□ -0.13
tA(AGC)GtA(AGC)G TY2B-DR1Q12472 1770 aa14.23□□□□□ -0.13
tA(AGC)GtA(AGC)G TY2B-OR2Q12501 1770 aa14.23□□□□□ -0.13
tA(AGC)GtA(AGC)G CHD1P32657 1468 aa14.23□□□□□ -0.13
tA(AGC)GtA(AGC)G CDC25P04821 1589 aa14.22□□□□□ -0.13
tA(AGC)GtA(AGC)G RQC2Q12532 1038 aaKnown RBP14.19□□□□□ -0.14
tA(AGC)GtA(AGC)G TY1B-BRQ12193 1756 aa14.15□□□□□ -0.14
tA(AGC)GtA(AGC)G TY1B-GR3Q12316 1755 aa14.15□□□□□ -0.14
tA(AGC)GtA(AGC)G TY1B-ORQ92393 1755 aa14.15□□□□□ -0.14
tA(AGC)GtA(AGC)G DNF1P32660 1571 aa14.15□□□□□ -0.14
tA(AGC)GtA(AGC)G TOP2P06786 1428 aaKnown RBP14.14□□□□□ -0.15
tA(AGC)GtA(AGC)G PAN1P32521 1480 aa14.1□□□□□ -0.15
tA(AGC)GtA(AGC)G ESC1Q03661 1658 aaKnown RBP14.09□□□□□ -0.15
tA(AGC)GtA(AGC)G RKR1Q04781 1562 aa14.08□□□□□ -0.16
tA(AGC)GtA(AGC)G MET5P47169 1442 aa14.06□□□□□ -0.16
tA(AGC)GtA(AGC)G POL1P13382 1468 aa14.06□□□□□ -0.16
tA(AGC)GtA(AGC)G TY2B-BQ12491 1770 aa14.05□□□□□ -0.16
tA(AGC)GtA(AGC)G TY1B-DR3Q99231 1755 aa14.04□□□□□ -0.16
tA(AGC)GtA(AGC)G TY1B-HO13535 1793 aa14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-DR5P0C2I2 1755 aa14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-DR6P0C2I3 1755 aa14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-LR2P0C2I5 1755 aa14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-LR3P0C2I6 1755 aaKnown RBP14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-PR1P0C2I9 1755 aaKnown RBP14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-PR2P0C2J0 1756 aa14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-PR3P0C2J1 1755 aaKnown RBP14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-JR1P47098 1755 aa14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-ML2Q03434 1755 aaKnown RBP14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-ER1Q03612 1755 aa14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-ML1Q04711 1755 aaKnown RBP14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-GR2Q12269 1755 aa14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-OLQ12273 1755 aa14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G TY1B-PLQ12414 1755 aaKnown RBP14.01□□□□□ -0.17
tA(AGC)GtA(AGC)G MMS22Q06164 1454 aa13.99□□□□□ -0.17
tA(AGC)GtA(AGC)G RPA190P10964 1664 aaKnown RBP13.98□□□□□ -0.17
tA(AGC)GtA(AGC)G STU1P38198 1513 aa13.96□□□□□ -0.17
tA(AGC)GtA(AGC)G YOR1P53049 1477 aa13.93□□□□□ -0.18
tA(AGC)GtA(AGC)G SMC4Q12267 1418 aa13.93□□□□□ -0.18
tA(AGC)GtA(AGC)G TRM732Q03496 1420 aa13.89□□□□□ -0.19
tA(AGC)GtA(AGC)G LTE1P07866 1435 aa13.87□□□□□ -0.19
tA(AGC)GtA(AGC)G SPP41P38904 1435 aa13.85□□□□□ -0.19
tA(AGC)GtA(AGC)G NUP159P40477 1460 aa13.75□□□□□ -0.21
tA(AGC)GtA(AGC)G TSC11P40061 1430 aa13.75□□□□□ -0.21
tA(AGC)GtA(AGC)G TY1B-JR2P47100 1755 aaKnown RBP13.75□□□□□ -0.21
tA(AGC)GtA(AGC)G TY1B-ER2Q03619 1755 aa13.75□□□□□ -0.21
tA(AGC)GtA(AGC)G TY1B-MR1Q04214 1755 aa13.75□□□□□ -0.21
tA(AGC)GtA(AGC)G TY1B-MR2Q04670 1755 aaKnown RBP13.75□□□□□ -0.21
tA(AGC)GtA(AGC)G TY1B-LR1Q12088 1755 aaKnown RBP13.75□□□□□ -0.21
tA(AGC)GtA(AGC)G TY1B-NL1Q12112 1755 aa13.75□□□□□ -0.21
tA(AGC)GtA(AGC)G TY1B-GR1Q12141 1755 aa13.75□□□□□ -0.21
tA(AGC)GtA(AGC)G TY1B-BLQ12490 1755 aa13.75□□□□□ -0.21
tA(AGC)GtA(AGC)G BNI1P41832 1953 aa13.74□□□□□ -0.21
tA(AGC)GtA(AGC)G YRF1-1P0CX20 1796 aa13.73□□□□□ -0.21
tA(AGC)GtA(AGC)G YRF1-5P0CX21 1796 aa13.73□□□□□ -0.21
tA(AGC)GtA(AGC)G YRF1-8P0CX22 1796 aa13.73□□□□□ -0.21
tA(AGC)GtA(AGC)G ITT1Q04638 464 aa13.72□□□□□ -0.21
tA(AGC)GtA(AGC)G VTH1P40438 1549 aa13.72□□□□□ -0.21
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms