RNA–Protein interactions for RNA: snR31

snR31, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR31, Length 225 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR31snR31 SGS1P35187 1447 aa15.11■□□□□ 0.01
snR31snR31 INO80P53115 1489 aa14.92□□□□□ -0.02
snR31snR31 TCB3Q03640 1545 aaKnown RBP14.74□□□□□ -0.05
snR31snR31 MON2P48563 1636 aaPredicted RBP14.52□□□□□ -0.08
snR31snR31 TY1B-DR4Q07793 1604 aa14.47□□□□□ -0.09
snR31snR31 SPA2P23201 1466 aaKnown RBP14.42□□□□□ -0.1
snR31snR31 SSN2P38931 1420 aa14.35□□□□□ -0.11
snR31snR31 SWR1Q05471 1514 aa14.21□□□□□ -0.13
snR31snR31 HSL1P34244 1518 aa14.2□□□□□ -0.14
snR31snR31 SPT6P23615 1451 aaKnown RBP14.19□□□□□ -0.14
snR31snR31 DRS1P32892 752 aaKnown RBP14.03□□□□□ -0.16
snR31snR31 HIR3P47171 1648 aa13.94□□□□□ -0.18
snR31snR31 KOG1P38873 1557 aa13.86□□□□□ -0.19
snR31snR31 XRN1P22147 1528 aaKnown RBP13.85□□□□□ -0.19
snR31snR31 DNA2P38859 1522 aa13.83□□□□□ -0.2
snR31snR31 REV3P14284 1504 aa13.65□□□□□ -0.22
snR31snR31 THO2P53552 1597 aaKnown RBP13.58□□□□□ -0.24
snR31snR31 SIN3P22579 1536 aa13.56□□□□□ -0.24
snR31snR31 BUD4P47136 1447 aa13.56□□□□□ -0.24
snR31snR31 ECM5Q03214 1411 aa13.5□□□□□ -0.25
snR31snR31 TAF2P23255 1407 aa13.47□□□□□ -0.25
snR31snR31 SSK2P53599 1579 aa13.46□□□□□ -0.25
snR31snR31 MYO2P19524 1574 aaKnown RBP13.37□□□□□ -0.27
snR31snR31 ESP1Q03018 1630 aa13.35□□□□□ -0.27
snR31snR31 ATG2P53855 1592 aa13.33□□□□□ -0.28
snR31snR31 SKI3P17883 1432 aaKnown RBP13.32□□□□□ -0.28
snR31snR31 MDS3P53094 1487 aa13.29□□□□□ -0.28
snR31snR31 PEP1P32319 1579 aa13.23□□□□□ -0.29
snR31snR31 YPK9Q12697 1472 aa13.2□□□□□ -0.3
snR31snR31 POL1P13382 1468 aa13.1□□□□□ -0.31
snR31snR31 SCC2Q04002 1493 aa13.05□□□□□ -0.32
snR31snR31 STU1P38198 1513 aa13.02□□□□□ -0.33
snR31snR31 RPO31P04051 1460 aa13□□□□□ -0.33
snR31snR31 YTA7P40340 1379 aa13□□□□□ -0.33
snR31snR31 UFD4P33202 1483 aa12.99□□□□□ -0.33
snR31snR31 RKR1Q04781 1562 aa12.97□□□□□ -0.33
snR31snR31 CHD1P32657 1468 aa12.94□□□□□ -0.34
snR31snR31 TOP2P06786 1428 aaKnown RBP12.94□□□□□ -0.34
snR31snR31 RSE1Q04693 1361 aaKnown RBP12.93□□□□□ -0.34
snR31snR31 YOR1P53049 1477 aa12.92□□□□□ -0.34
snR31snR31 BPT1P14772 1559 aa12.91□□□□□ -0.34
snR31snR31 YCF1P39109 1515 aaKnown RBP12.88□□□□□ -0.35
snR31snR31 SMC4Q12267 1418 aa12.88□□□□□ -0.35
snR31snR31 MMS22Q06164 1454 aa12.85□□□□□ -0.35
snR31snR31 MYO4P32492 1471 aa12.84□□□□□ -0.35
snR31snR31 TY2B-LR1P0C2J3 1770 aa12.79□□□□□ -0.36
snR31snR31 TY2B-FP0CX63 1770 aa12.79□□□□□ -0.36
snR31snR31 TY2B-GR2P0CX64 1770 aa12.79□□□□□ -0.36
snR31snR31 TY2B-CP25384 1770 aa12.79□□□□□ -0.36
snR31snR31 TY2B-DR2Q03494 1770 aa12.79□□□□□ -0.36
snR31snR31 TY1B-DR1Q03855 1755 aa12.79□□□□□ -0.36
snR31snR31 TY2B-DR3Q07791 1770 aaKnown RBP12.79□□□□□ -0.36
snR31snR31 TY2B-OR1Q12113 1770 aa12.79□□□□□ -0.36
snR31snR31 TY2B-DR1Q12472 1770 aa12.79□□□□□ -0.36
snR31snR31 TY2B-OR2Q12501 1770 aa12.79□□□□□ -0.36
snR31snR31 RQC2Q12532 1038 aaKnown RBP12.77□□□□□ -0.37
snR31snR31 TAF7Q05021 590 aa12.74□□□□□ -0.37
snR31snR31 SAS10Q12136 610 aaPredicted RBP12.74□□□□□ -0.37
snR31snR31 MTC1P47018 478 aaKnown RBP12.73□□□□□ -0.37
snR31snR31 TY1B-DR3Q99231 1755 aa12.7□□□□□ -0.38
snR31snR31 TY2B-BQ12491 1770 aa12.67□□□□□ -0.38
snR31snR31 CDC25P04821 1589 aa12.66□□□□□ -0.38
snR31snR31 SPP41P38904 1435 aa12.65□□□□□ -0.38
snR31snR31 PAN1P32521 1480 aa12.62□□□□□ -0.39
snR31snR31 STH1P32597 1359 aa12.62□□□□□ -0.39
snR31snR31 TY1B-BRQ12193 1756 aa12.61□□□□□ -0.39
snR31snR31 TY1B-GR3Q12316 1755 aa12.61□□□□□ -0.39
snR31snR31 TY1B-ORQ92393 1755 aa12.61□□□□□ -0.39
snR31snR31 TY1B-HO13535 1793 aa12.6□□□□□ -0.39
snR31snR31 TY1B-DR5P0C2I2 1755 aa12.6□□□□□ -0.39
snR31snR31 TY1B-DR6P0C2I3 1755 aa12.6□□□□□ -0.39
snR31snR31 TY1B-LR2P0C2I5 1755 aa12.6□□□□□ -0.39
snR31snR31 TY1B-LR3P0C2I6 1755 aaKnown RBP12.6□□□□□ -0.39
snR31snR31 TY1B-PR1P0C2I9 1755 aaKnown RBP12.6□□□□□ -0.39
snR31snR31 TY1B-PR2P0C2J0 1756 aa12.6□□□□□ -0.39
snR31snR31 TY1B-PR3P0C2J1 1755 aaKnown RBP12.6□□□□□ -0.39
snR31snR31 TY1B-JR1P47098 1755 aa12.6□□□□□ -0.39
snR31snR31 TY1B-ML2Q03434 1755 aaKnown RBP12.6□□□□□ -0.39
snR31snR31 TY1B-ER1Q03612 1755 aa12.6□□□□□ -0.39
snR31snR31 TY1B-ML1Q04711 1755 aaKnown RBP12.6□□□□□ -0.39
snR31snR31 TY1B-GR2Q12269 1755 aa12.6□□□□□ -0.39
snR31snR31 TY1B-OLQ12273 1755 aa12.6□□□□□ -0.39
snR31snR31 TY1B-PLQ12414 1755 aaKnown RBP12.6□□□□□ -0.39
snR31snR31 SNQ2P32568 1501 aaKnown RBP12.59□□□□□ -0.39
snR31snR31 TSC11P40061 1430 aa12.55□□□□□ -0.4
snR31snR31 VTH1P40438 1549 aa12.53□□□□□ -0.4
snR31snR31 VTH2P40890 1549 aa12.53□□□□□ -0.4
snR31snR31 TRM732Q03496 1420 aa12.52□□□□□ -0.41
snR31snR31 ESC1Q03661 1658 aaKnown RBP12.51□□□□□ -0.41
snR31snR31 MLP2P40457 1679 aa12.51□□□□□ -0.41
snR31snR31 PDR15Q04182 1529 aaKnown RBP12.44□□□□□ -0.42
snR31snR31 IFH1P39520 1085 aa12.43□□□□□ -0.42
snR31snR31 RTT106P40161 455 aa12.43□□□□□ -0.42
snR31snR31 RPA190P10964 1664 aaKnown RBP12.4□□□□□ -0.42
snR31snR31 DNF1P32660 1571 aa12.39□□□□□ -0.43
snR31snR31 SNT2P53127 1403 aa12.39□□□□□ -0.43
snR31snR31 TY1B-JR2P47100 1755 aaKnown RBP12.39□□□□□ -0.43
snR31snR31 TY1B-ER2Q03619 1755 aa12.39□□□□□ -0.43
snR31snR31 TY1B-MR1Q04214 1755 aa12.39□□□□□ -0.43
snR31snR31 TY1B-MR2Q04670 1755 aaKnown RBP12.39□□□□□ -0.43
Retrieved 100 of 5,963 RNA–protein pairs in 8.1 ms