RNA–Protein interactions for RNA: YPR023C

EAF3, Transcript of Component of the Rpd3S histone deacetylase complex, yeastyeast

Gene EAF3, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAF3YPR023C SGS1P35187 1447 aa16.57■□□□□ 0.24
EAF3YPR023C INO80P53115 1489 aa16.28■□□□□ 0.2
EAF3YPR023C MON2P48563 1636 aaPredicted RBP16.27■□□□□ 0.19
EAF3YPR023C TCB3Q03640 1545 aaKnown RBP16.2■□□□□ 0.18
EAF3YPR023C TY1B-DR4Q07793 1604 aa16.05■□□□□ 0.16
EAF3YPR023C SWR1Q05471 1514 aa15.86■□□□□ 0.13
EAF3YPR023C HSL1P34244 1518 aa15.69■□□□□ 0.1
EAF3YPR023C SSN2P38931 1420 aa15.67■□□□□ 0.1
EAF3YPR023C SPT6P23615 1451 aaKnown RBP15.65■□□□□ 0.1
EAF3YPR023C SPA2P23201 1466 aaKnown RBP15.59■□□□□ 0.09
EAF3YPR023C DNA2P38859 1522 aa15.53■□□□□ 0.08
EAF3YPR023C HIR3P47171 1648 aa15.4■□□□□ 0.06
EAF3YPR023C KOG1P38873 1557 aa15.38■□□□□ 0.05
EAF3YPR023C XRN1P22147 1528 aaKnown RBP15.25■□□□□ 0.03
EAF3YPR023C DRS1P32892 752 aaKnown RBP15.18■□□□□ 0.02
EAF3YPR023C REV3P14284 1504 aa15.02□□□□□ -0.01
EAF3YPR023C ECM5Q03214 1411 aa14.99□□□□□ -0.01
EAF3YPR023C BUD4P47136 1447 aa14.98□□□□□ -0.01
EAF3YPR023C THO2P53552 1597 aaKnown RBP14.97□□□□□ -0.01
EAF3YPR023C SIN3P22579 1536 aa14.87□□□□□ -0.03
EAF3YPR023C TAF2P23255 1407 aa14.86□□□□□ -0.03
EAF3YPR023C SSK2P53599 1579 aa14.78□□□□□ -0.04
EAF3YPR023C ATG2P53855 1592 aa14.76□□□□□ -0.05
EAF3YPR023C MDS3P53094 1487 aa14.74□□□□□ -0.05
EAF3YPR023C PEP1P32319 1579 aa14.69□□□□□ -0.06
EAF3YPR023C SKI3P17883 1432 aaKnown RBP14.67□□□□□ -0.06
EAF3YPR023C ESP1Q03018 1630 aa14.66□□□□□ -0.06
EAF3YPR023C MYO2P19524 1574 aaKnown RBP14.54□□□□□ -0.08
EAF3YPR023C RSE1Q04693 1361 aaKnown RBP14.49□□□□□ -0.09
EAF3YPR023C YPK9Q12697 1472 aa14.47□□□□□ -0.09
EAF3YPR023C SCC2Q04002 1493 aa14.38□□□□□ -0.11
EAF3YPR023C UFD4P33202 1483 aa14.33□□□□□ -0.12
EAF3YPR023C RPO31P04051 1460 aa14.31□□□□□ -0.12
EAF3YPR023C POL1P13382 1468 aa14.3□□□□□ -0.12
EAF3YPR023C BPT1P14772 1559 aa14.29□□□□□ -0.12
EAF3YPR023C STU1P38198 1513 aa14.23□□□□□ -0.13
EAF3YPR023C RKR1Q04781 1562 aa14.19□□□□□ -0.14
EAF3YPR023C YCF1P39109 1515 aaKnown RBP14.19□□□□□ -0.14
EAF3YPR023C TOP2P06786 1428 aaKnown RBP14.16□□□□□ -0.14
EAF3YPR023C MTC1P47018 478 aaKnown RBP14.15□□□□□ -0.14
EAF3YPR023C YOR1P53049 1477 aa14.12□□□□□ -0.15
EAF3YPR023C TY2B-LR1P0C2J3 1770 aa14.12□□□□□ -0.15
EAF3YPR023C TY2B-FP0CX63 1770 aa14.12□□□□□ -0.15
EAF3YPR023C TY2B-GR2P0CX64 1770 aa14.12□□□□□ -0.15
EAF3YPR023C TY2B-CP25384 1770 aa14.12□□□□□ -0.15
EAF3YPR023C TY2B-DR2Q03494 1770 aa14.12□□□□□ -0.15
EAF3YPR023C TY1B-DR1Q03855 1755 aa14.12□□□□□ -0.15
EAF3YPR023C TY2B-DR3Q07791 1770 aaKnown RBP14.12□□□□□ -0.15
EAF3YPR023C TY2B-OR1Q12113 1770 aa14.12□□□□□ -0.15
EAF3YPR023C TY2B-DR1Q12472 1770 aa14.12□□□□□ -0.15
EAF3YPR023C TY2B-OR2Q12501 1770 aa14.12□□□□□ -0.15
EAF3YPR023C SMC4Q12267 1418 aa14.06□□□□□ -0.16
EAF3YPR023C YTA7P40340 1379 aa14.04□□□□□ -0.16
EAF3YPR023C RQC2Q12532 1038 aaKnown RBP14.02□□□□□ -0.17
EAF3YPR023C TY1B-DR3Q99231 1755 aa14.01□□□□□ -0.17
EAF3YPR023C CHD1P32657 1468 aa13.99□□□□□ -0.17
EAF3YPR023C TY2B-BQ12491 1770 aa13.98□□□□□ -0.17
EAF3YPR023C CDC25P04821 1589 aa13.96□□□□□ -0.17
EAF3YPR023C TY1B-BRQ12193 1756 aa13.96□□□□□ -0.18
EAF3YPR023C TY1B-GR3Q12316 1755 aa13.96□□□□□ -0.18
EAF3YPR023C TY1B-ORQ92393 1755 aa13.96□□□□□ -0.18
EAF3YPR023C MYO4P32492 1471 aa13.93□□□□□ -0.18
EAF3YPR023C MMS22Q06164 1454 aa13.92□□□□□ -0.18
EAF3YPR023C TY1B-HO13535 1793 aa13.9□□□□□ -0.18
EAF3YPR023C TY1B-DR5P0C2I2 1755 aa13.9□□□□□ -0.18
EAF3YPR023C TY1B-DR6P0C2I3 1755 aa13.9□□□□□ -0.18
EAF3YPR023C TY1B-LR2P0C2I5 1755 aa13.9□□□□□ -0.18
EAF3YPR023C TY1B-LR3P0C2I6 1755 aaKnown RBP13.9□□□□□ -0.18
EAF3YPR023C TY1B-PR1P0C2I9 1755 aaKnown RBP13.9□□□□□ -0.18
EAF3YPR023C TY1B-PR2P0C2J0 1756 aa13.9□□□□□ -0.18
EAF3YPR023C TY1B-PR3P0C2J1 1755 aaKnown RBP13.9□□□□□ -0.18
EAF3YPR023C TY1B-JR1P47098 1755 aa13.9□□□□□ -0.18
EAF3YPR023C TY1B-ML2Q03434 1755 aaKnown RBP13.9□□□□□ -0.18
EAF3YPR023C TY1B-ER1Q03612 1755 aa13.9□□□□□ -0.18
EAF3YPR023C TY1B-ML1Q04711 1755 aaKnown RBP13.9□□□□□ -0.18
EAF3YPR023C TY1B-GR2Q12269 1755 aa13.9□□□□□ -0.18
EAF3YPR023C TY1B-OLQ12273 1755 aa13.9□□□□□ -0.18
EAF3YPR023C TY1B-PLQ12414 1755 aaKnown RBP13.9□□□□□ -0.18
EAF3YPR023C PAN1P32521 1480 aa13.89□□□□□ -0.19
EAF3YPR023C SPP41P38904 1435 aa13.87□□□□□ -0.19
EAF3YPR023C SAS10Q12136 610 aaPredicted RBP13.81□□□□□ -0.2
EAF3YPR023C DNF1P32660 1571 aa13.8□□□□□ -0.2
EAF3YPR023C ESC1Q03661 1658 aaKnown RBP13.79□□□□□ -0.2
EAF3YPR023C TSC11P40061 1430 aa13.76□□□□□ -0.21
EAF3YPR023C VTH1P40438 1549 aa13.74□□□□□ -0.21
EAF3YPR023C VTH2P40890 1549 aa13.74□□□□□ -0.21
EAF3YPR023C SNQ2P32568 1501 aaKnown RBP13.74□□□□□ -0.21
EAF3YPR023C RPA190P10964 1664 aaKnown RBP13.72□□□□□ -0.21
EAF3YPR023C TRM732Q03496 1420 aa13.72□□□□□ -0.21
EAF3YPR023C STH1P32597 1359 aa13.71□□□□□ -0.22
EAF3YPR023C TY1B-JR2P47100 1755 aaKnown RBP13.66□□□□□ -0.22
EAF3YPR023C TY1B-ER2Q03619 1755 aa13.66□□□□□ -0.22
EAF3YPR023C TY1B-MR1Q04214 1755 aa13.66□□□□□ -0.22
EAF3YPR023C TY1B-MR2Q04670 1755 aaKnown RBP13.66□□□□□ -0.22
EAF3YPR023C TY1B-LR1Q12088 1755 aaKnown RBP13.66□□□□□ -0.22
EAF3YPR023C TY1B-NL1Q12112 1755 aa13.66□□□□□ -0.22
EAF3YPR023C TY1B-GR1Q12141 1755 aa13.66□□□□□ -0.22
EAF3YPR023C TY1B-BLQ12490 1755 aa13.66□□□□□ -0.22
EAF3YPR023C TAF7Q05021 590 aa13.62□□□□□ -0.23
EAF3YPR023C SNT2P53127 1403 aa13.6□□□□□ -0.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms