RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W MON2P48563 1636 aaPredicted RBP12.27□□□□□ -0.44
SSO1YPL232W INO80P53115 1489 aa12.11□□□□□ -0.47
SSO1YPL232W DNA2P38859 1522 aa11.59□□□□□ -0.55
SSO1YPL232W SWR1Q05471 1514 aa11.51□□□□□ -0.57
SSO1YPL232W KOG1P38873 1557 aa11.42□□□□□ -0.58
SSO1YPL232W TY1B-DR4Q07793 1604 aa11.35□□□□□ -0.59
SSO1YPL232W TCB3Q03640 1545 aaKnown RBP11.25□□□□□ -0.61
SSO1YPL232W RSE1Q04693 1361 aaKnown RBP11.22□□□□□ -0.61
SSO1YPL232W HSL1P34244 1518 aa10.84□□□□□ -0.67
SSO1YPL232W SPT6P23615 1451 aaKnown RBP10.79□□□□□ -0.68
SSO1YPL232W SGS1P35187 1447 aa10.78□□□□□ -0.68
SSO1YPL232W SPA2P23201 1466 aaKnown RBP10.77□□□□□ -0.69
SSO1YPL232W THO2P53552 1597 aaKnown RBP10.62□□□□□ -0.71
SSO1YPL232W ECM5Q03214 1411 aa10.62□□□□□ -0.71
SSO1YPL232W HIR3P47171 1648 aa10.56□□□□□ -0.72
SSO1YPL232W BUD4P47136 1447 aa10.56□□□□□ -0.72
SSO1YPL232W MDS3P53094 1487 aa10.52□□□□□ -0.73
SSO1YPL232W MTC1P47018 478 aaKnown RBP10.45□□□□□ -0.74
SSO1YPL232W PEP1P32319 1579 aa10.4□□□□□ -0.74
SSO1YPL232W REV3P14284 1504 aa10.38□□□□□ -0.75
SSO1YPL232W ATG2P53855 1592 aa10.3□□□□□ -0.76
SSO1YPL232W XRN1P22147 1528 aaKnown RBP10.27□□□□□ -0.77
SSO1YPL232W BPT1P14772 1559 aa10.25□□□□□ -0.77
SSO1YPL232W SSK2P53599 1579 aa10.11□□□□□ -0.79
SSO1YPL232W YCF1P39109 1515 aaKnown RBP10.08□□□□□ -0.8
SSO1YPL232W SIN3P22579 1536 aa10.01□□□□□ -0.81
SSO1YPL232W SKI3P17883 1432 aaKnown RBP9.93□□□□□ -0.82
SSO1YPL232W ESP1Q03018 1630 aa9.89□□□□□ -0.83
SSO1YPL232W MIF2P35201 549 aa9.89□□□□□ -0.83
SSO1YPL232W TAF2P23255 1407 aa9.87□□□□□ -0.83
SSO1YPL232W MYO2P19524 1574 aaKnown RBP9.86□□□□□ -0.83
SSO1YPL232W ESC1Q03661 1658 aaKnown RBP9.83□□□□□ -0.84
SSO1YPL232W UFD4P33202 1483 aa9.82□□□□□ -0.84
SSO1YPL232W SSN2P38931 1420 aa9.8□□□□□ -0.84
SSO1YPL232W MET5P47169 1442 aa9.8□□□□□ -0.84
SSO1YPL232W CDC25P04821 1589 aa9.79□□□□□ -0.84
SSO1YPL232W DNF1P32660 1571 aa9.78□□□□□ -0.84
SSO1YPL232W BNI1P41832 1953 aa9.77□□□□□ -0.84
SSO1YPL232W TY2B-LR1P0C2J3 1770 aa9.75□□□□□ -0.85
SSO1YPL232W TY2B-FP0CX63 1770 aa9.75□□□□□ -0.85
SSO1YPL232W TY2B-GR2P0CX64 1770 aa9.75□□□□□ -0.85
SSO1YPL232W TY2B-CP25384 1770 aa9.75□□□□□ -0.85
SSO1YPL232W TY2B-DR2Q03494 1770 aa9.75□□□□□ -0.85
SSO1YPL232W TY1B-DR1Q03855 1755 aa9.75□□□□□ -0.85
SSO1YPL232W TY2B-DR3Q07791 1770 aaKnown RBP9.75□□□□□ -0.85
SSO1YPL232W TY2B-OR1Q12113 1770 aa9.75□□□□□ -0.85
SSO1YPL232W TY1B-BRQ12193 1756 aa9.75□□□□□ -0.85
SSO1YPL232W TY1B-GR3Q12316 1755 aa9.75□□□□□ -0.85
SSO1YPL232W TY2B-DR1Q12472 1770 aa9.75□□□□□ -0.85
SSO1YPL232W TY2B-OR2Q12501 1770 aa9.75□□□□□ -0.85
SSO1YPL232W TY1B-ORQ92393 1755 aa9.75□□□□□ -0.85
SSO1YPL232W RPA190P10964 1664 aaKnown RBP9.75□□□□□ -0.85
SSO1YPL232W SCC2Q04002 1493 aa9.75□□□□□ -0.85
SSO1YPL232W LTE1P07866 1435 aa9.73□□□□□ -0.85
SSO1YPL232W YPK9Q12697 1472 aa9.72□□□□□ -0.85
SSO1YPL232W CHD1P32657 1468 aa9.72□□□□□ -0.85
SSO1YPL232W RKR1Q04781 1562 aa9.71□□□□□ -0.85
SSO1YPL232W RPO31P04051 1460 aa9.68□□□□□ -0.86
SSO1YPL232W TY1B-HO13535 1793 aa9.63□□□□□ -0.87
SSO1YPL232W TY1B-DR5P0C2I2 1755 aa9.63□□□□□ -0.87
SSO1YPL232W TY1B-DR6P0C2I3 1755 aa9.63□□□□□ -0.87
SSO1YPL232W TY1B-LR2P0C2I5 1755 aa9.63□□□□□ -0.87
SSO1YPL232W TY1B-LR3P0C2I6 1755 aaKnown RBP9.63□□□□□ -0.87
SSO1YPL232W TY1B-PR1P0C2I9 1755 aaKnown RBP9.63□□□□□ -0.87
SSO1YPL232W TY1B-PR2P0C2J0 1756 aa9.63□□□□□ -0.87
SSO1YPL232W TY1B-PR3P0C2J1 1755 aaKnown RBP9.63□□□□□ -0.87
SSO1YPL232W TY1B-JR1P47098 1755 aa9.63□□□□□ -0.87
SSO1YPL232W TY1B-ML2Q03434 1755 aaKnown RBP9.63□□□□□ -0.87
SSO1YPL232W TY1B-ER1Q03612 1755 aa9.63□□□□□ -0.87
SSO1YPL232W TY1B-ML1Q04711 1755 aaKnown RBP9.63□□□□□ -0.87
SSO1YPL232W TY1B-GR2Q12269 1755 aa9.63□□□□□ -0.87
SSO1YPL232W TY1B-OLQ12273 1755 aa9.63□□□□□ -0.87
SSO1YPL232W TY1B-PLQ12414 1755 aaKnown RBP9.63□□□□□ -0.87
SSO1YPL232W TY2B-BQ12491 1770 aa9.62□□□□□ -0.87
SSO1YPL232W PAN1P32521 1480 aa9.61□□□□□ -0.87
SSO1YPL232W GEA2P39993 1459 aaKnown RBP9.6□□□□□ -0.87
SSO1YPL232W TY1B-DR3Q99231 1755 aa9.57□□□□□ -0.88
SSO1YPL232W IRC20Q06554 1556 aa9.55□□□□□ -0.88
SSO1YPL232W YFR006WP43590 535 aa9.53□□□□□ -0.88
SSO1YPL232W YRF1-1P0CX20 1796 aa9.52□□□□□ -0.88
SSO1YPL232W YRF1-5P0CX21 1796 aa9.52□□□□□ -0.88
SSO1YPL232W YRF1-8P0CX22 1796 aa9.52□□□□□ -0.88
SSO1YPL232W ITT1Q04638 464 aa9.51□□□□□ -0.89
SSO1YPL232W MMS1Q06211 1407 aa9.47□□□□□ -0.89
SSO1YPL232W ABP1P15891 592 aaKnown RBP9.46□□□□□ -0.9
SSO1YPL232W TOP2P06786 1428 aaKnown RBP9.46□□□□□ -0.9
SSO1YPL232W RQC2Q12532 1038 aaKnown RBP9.45□□□□□ -0.9
SSO1YPL232W FAP1P53971 965 aa9.44□□□□□ -0.9
SSO1YPL232W MMS22Q06164 1454 aa9.43□□□□□ -0.9
SSO1YPL232W NTE1Q04958 1679 aa9.42□□□□□ -0.9
SSO1YPL232W TY1B-JR2P47100 1755 aaKnown RBP9.41□□□□□ -0.9
SSO1YPL232W TY1B-ER2Q03619 1755 aa9.41□□□□□ -0.9
SSO1YPL232W TY1B-MR1Q04214 1755 aa9.41□□□□□ -0.9
SSO1YPL232W TY1B-MR2Q04670 1755 aaKnown RBP9.41□□□□□ -0.9
SSO1YPL232W TY1B-LR1Q12088 1755 aaKnown RBP9.41□□□□□ -0.9
SSO1YPL232W TY1B-NL1Q12112 1755 aa9.41□□□□□ -0.9
SSO1YPL232W TY1B-GR1Q12141 1755 aa9.41□□□□□ -0.9
SSO1YPL232W TY1B-BLQ12490 1755 aa9.41□□□□□ -0.9
SSO1YPL232W DNF2Q12675 1612 aa9.41□□□□□ -0.9
SSO1YPL232W TRM732Q03496 1420 aa9.4□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms