RNA–Protein interactions for RNA: YPL029W

SUV3, Transcript of ATP-dependent RNA helicase, yeastyeast

Gene SUV3, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUV3YPL029W SGS1P35187 1447 aa15.3■□□□□ 0.04
SUV3YPL029W INO80P53115 1489 aa14.93□□□□□ -0.02
SUV3YPL029W TCB3Q03640 1545 aaKnown RBP14.78□□□□□ -0.04
SUV3YPL029W TY1B-DR4Q07793 1604 aa14.67□□□□□ -0.06
SUV3YPL029W MON2P48563 1636 aaPredicted RBP14.61□□□□□ -0.07
SUV3YPL029W SSN2P38931 1420 aa14.6□□□□□ -0.07
SUV3YPL029W SPA2P23201 1466 aaKnown RBP14.59□□□□□ -0.07
SUV3YPL029W HSL1P34244 1518 aa14.38□□□□□ -0.11
SUV3YPL029W SWR1Q05471 1514 aa14.33□□□□□ -0.11
SUV3YPL029W SPT6P23615 1451 aaKnown RBP14.33□□□□□ -0.12
SUV3YPL029W DRS1P32892 752 aaKnown RBP14.15□□□□□ -0.14
SUV3YPL029W HIR3P47171 1648 aa14.14□□□□□ -0.15
SUV3YPL029W XRN1P22147 1528 aaKnown RBP14.04□□□□□ -0.16
SUV3YPL029W DNA2P38859 1522 aa13.94□□□□□ -0.18
SUV3YPL029W KOG1P38873 1557 aa13.83□□□□□ -0.2
SUV3YPL029W REV3P14284 1504 aa13.83□□□□□ -0.2
SUV3YPL029W TAF2P23255 1407 aa13.7□□□□□ -0.22
SUV3YPL029W SIN3P22579 1536 aa13.69□□□□□ -0.22
SUV3YPL029W THO2P53552 1597 aaKnown RBP13.68□□□□□ -0.22
SUV3YPL029W SSK2P53599 1579 aa13.65□□□□□ -0.22
SUV3YPL029W ECM5Q03214 1411 aa13.61□□□□□ -0.23
SUV3YPL029W BUD4P47136 1447 aa13.61□□□□□ -0.23
SUV3YPL029W ESP1Q03018 1630 aa13.56□□□□□ -0.24
SUV3YPL029W ATG2P53855 1592 aa13.52□□□□□ -0.24
SUV3YPL029W SKI3P17883 1432 aaKnown RBP13.45□□□□□ -0.26
SUV3YPL029W MYO2P19524 1574 aaKnown RBP13.44□□□□□ -0.26
SUV3YPL029W PEP1P32319 1579 aa13.4□□□□□ -0.26
SUV3YPL029W MDS3P53094 1487 aa13.38□□□□□ -0.27
SUV3YPL029W YPK9Q12697 1472 aa13.3□□□□□ -0.28
SUV3YPL029W POL1P13382 1468 aa13.24□□□□□ -0.29
SUV3YPL029W STU1P38198 1513 aa13.22□□□□□ -0.29
SUV3YPL029W SCC2Q04002 1493 aa13.21□□□□□ -0.29
SUV3YPL029W RKR1Q04781 1562 aa13.14□□□□□ -0.31
SUV3YPL029W RPO31P04051 1460 aa13.12□□□□□ -0.31
SUV3YPL029W UFD4P33202 1483 aa13.12□□□□□ -0.31
SUV3YPL029W BPT1P14772 1559 aa13.1□□□□□ -0.31
SUV3YPL029W TY2B-LR1P0C2J3 1770 aa13.08□□□□□ -0.32
SUV3YPL029W TY2B-FP0CX63 1770 aa13.08□□□□□ -0.32
SUV3YPL029W TY2B-GR2P0CX64 1770 aa13.08□□□□□ -0.32
SUV3YPL029W TY2B-CP25384 1770 aa13.08□□□□□ -0.32
SUV3YPL029W TY2B-DR2Q03494 1770 aa13.08□□□□□ -0.32
SUV3YPL029W TY1B-DR1Q03855 1755 aa13.08□□□□□ -0.32
SUV3YPL029W TY2B-DR3Q07791 1770 aaKnown RBP13.08□□□□□ -0.32
SUV3YPL029W TY2B-OR1Q12113 1770 aa13.08□□□□□ -0.32
SUV3YPL029W TY2B-DR1Q12472 1770 aa13.08□□□□□ -0.32
SUV3YPL029W TY2B-OR2Q12501 1770 aa13.08□□□□□ -0.32
SUV3YPL029W MMS22Q06164 1454 aa13.08□□□□□ -0.32
SUV3YPL029W CHD1P32657 1468 aa13.07□□□□□ -0.32
SUV3YPL029W YOR1P53049 1477 aa13.05□□□□□ -0.32
SUV3YPL029W YTA7P40340 1379 aa13.04□□□□□ -0.32
SUV3YPL029W YCF1P39109 1515 aaKnown RBP13.04□□□□□ -0.32
SUV3YPL029W TOP2P06786 1428 aaKnown RBP13.03□□□□□ -0.32
SUV3YPL029W TY1B-DR3Q99231 1755 aa13.01□□□□□ -0.33
SUV3YPL029W TY2B-BQ12491 1770 aa12.96□□□□□ -0.33
SUV3YPL029W SAS10Q12136 610 aaPredicted RBP12.95□□□□□ -0.34
SUV3YPL029W SMC4Q12267 1418 aa12.94□□□□□ -0.34
SUV3YPL029W MYO4P32492 1471 aa12.9□□□□□ -0.34
SUV3YPL029W TY1B-BRQ12193 1756 aa12.88□□□□□ -0.35
SUV3YPL029W TY1B-GR3Q12316 1755 aa12.88□□□□□ -0.35
SUV3YPL029W TY1B-ORQ92393 1755 aa12.88□□□□□ -0.35
SUV3YPL029W TY1B-HO13535 1793 aa12.87□□□□□ -0.35
SUV3YPL029W TY1B-DR5P0C2I2 1755 aa12.87□□□□□ -0.35
SUV3YPL029W TY1B-DR6P0C2I3 1755 aa12.87□□□□□ -0.35
SUV3YPL029W TY1B-LR2P0C2I5 1755 aa12.87□□□□□ -0.35
SUV3YPL029W TY1B-LR3P0C2I6 1755 aaKnown RBP12.87□□□□□ -0.35
SUV3YPL029W TY1B-PR1P0C2I9 1755 aaKnown RBP12.87□□□□□ -0.35
SUV3YPL029W TY1B-PR2P0C2J0 1756 aa12.87□□□□□ -0.35
SUV3YPL029W TY1B-PR3P0C2J1 1755 aaKnown RBP12.87□□□□□ -0.35
SUV3YPL029W TY1B-JR1P47098 1755 aa12.87□□□□□ -0.35
SUV3YPL029W TY1B-ML2Q03434 1755 aaKnown RBP12.87□□□□□ -0.35
SUV3YPL029W TY1B-ER1Q03612 1755 aa12.87□□□□□ -0.35
SUV3YPL029W TY1B-ML1Q04711 1755 aaKnown RBP12.87□□□□□ -0.35
SUV3YPL029W TY1B-GR2Q12269 1755 aa12.87□□□□□ -0.35
SUV3YPL029W TY1B-OLQ12273 1755 aa12.87□□□□□ -0.35
SUV3YPL029W TY1B-PLQ12414 1755 aaKnown RBP12.87□□□□□ -0.35
SUV3YPL029W RSE1Q04693 1361 aaKnown RBP12.85□□□□□ -0.35
SUV3YPL029W RQC2Q12532 1038 aaKnown RBP12.84□□□□□ -0.35
SUV3YPL029W SNQ2P32568 1501 aaKnown RBP12.77□□□□□ -0.36
SUV3YPL029W CDC25P04821 1589 aa12.76□□□□□ -0.37
SUV3YPL029W SPP41P38904 1435 aa12.75□□□□□ -0.37
SUV3YPL029W TFA1P36100 482 aa12.75□□□□□ -0.37
SUV3YPL029W STH1P32597 1359 aa12.75□□□□□ -0.37
SUV3YPL029W MLP2P40457 1679 aa12.74□□□□□ -0.37
SUV3YPL029W MTC1P47018 478 aaKnown RBP12.69□□□□□ -0.38
SUV3YPL029W PAN1P32521 1480 aa12.68□□□□□ -0.38
SUV3YPL029W TY1B-JR2P47100 1755 aaKnown RBP12.66□□□□□ -0.38
SUV3YPL029W TY1B-ER2Q03619 1755 aa12.66□□□□□ -0.38
SUV3YPL029W TY1B-MR1Q04214 1755 aa12.66□□□□□ -0.38
SUV3YPL029W TY1B-MR2Q04670 1755 aaKnown RBP12.66□□□□□ -0.38
SUV3YPL029W TY1B-LR1Q12088 1755 aaKnown RBP12.66□□□□□ -0.38
SUV3YPL029W TY1B-NL1Q12112 1755 aa12.66□□□□□ -0.38
SUV3YPL029W TY1B-GR1Q12141 1755 aa12.66□□□□□ -0.38
SUV3YPL029W TY1B-BLQ12490 1755 aa12.66□□□□□ -0.38
SUV3YPL029W ESC1Q03661 1658 aaKnown RBP12.66□□□□□ -0.38
SUV3YPL029W VTH1P40438 1549 aa12.66□□□□□ -0.38
SUV3YPL029W VTH2P40890 1549 aa12.66□□□□□ -0.38
SUV3YPL029W PDR15Q04182 1529 aaKnown RBP12.66□□□□□ -0.38
SUV3YPL029W TSC11P40061 1430 aa12.65□□□□□ -0.38
SUV3YPL029W TAF7Q05021 590 aa12.65□□□□□ -0.38
SUV3YPL029W TRM732Q03496 1420 aa12.63□□□□□ -0.39
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms