RNA–Protein interactions for RNA: YOR362C

PRE10, Transcript of Alpha 7 subunit of the 20S proteasome, yeastyeast

Gene PRE10, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE10YOR362C SGS1P35187 1447 aa14.21□□□□□ -0.13
PRE10YOR362C INO80P53115 1489 aa14.06□□□□□ -0.16
PRE10YOR362C MON2P48563 1636 aaPredicted RBP14.01□□□□□ -0.17
PRE10YOR362C TCB3Q03640 1545 aaKnown RBP13.98□□□□□ -0.17
PRE10YOR362C TY1B-DR4Q07793 1604 aa13.76□□□□□ -0.21
PRE10YOR362C SWR1Q05471 1514 aa13.63□□□□□ -0.23
PRE10YOR362C HSL1P34244 1518 aa13.46□□□□□ -0.25
PRE10YOR362C SPT6P23615 1451 aaKnown RBP13.46□□□□□ -0.25
PRE10YOR362C SPA2P23201 1466 aaKnown RBP13.42□□□□□ -0.26
PRE10YOR362C SSN2P38931 1420 aa13.39□□□□□ -0.27
PRE10YOR362C DNA2P38859 1522 aa13.36□□□□□ -0.27
PRE10YOR362C KOG1P38873 1557 aa13.32□□□□□ -0.28
PRE10YOR362C HIR3P47171 1648 aa13.21□□□□□ -0.3
PRE10YOR362C XRN1P22147 1528 aaKnown RBP13.08□□□□□ -0.31
PRE10YOR362C DRS1P32892 752 aaKnown RBP13.07□□□□□ -0.32
PRE10YOR362C THO2P53552 1597 aaKnown RBP12.91□□□□□ -0.34
PRE10YOR362C BUD4P47136 1447 aa12.9□□□□□ -0.34
PRE10YOR362C ECM5Q03214 1411 aa12.9□□□□□ -0.34
PRE10YOR362C REV3P14284 1504 aa12.88□□□□□ -0.35
PRE10YOR362C SIN3P22579 1536 aa12.78□□□□□ -0.36
PRE10YOR362C TAF2P23255 1407 aa12.72□□□□□ -0.37
PRE10YOR362C MDS3P53094 1487 aa12.68□□□□□ -0.38
PRE10YOR362C SSK2P53599 1579 aa12.67□□□□□ -0.38
PRE10YOR362C ATG2P53855 1592 aa12.65□□□□□ -0.38
PRE10YOR362C SKI3P17883 1432 aaKnown RBP12.62□□□□□ -0.39
PRE10YOR362C PEP1P32319 1579 aa12.6□□□□□ -0.39
PRE10YOR362C RSE1Q04693 1361 aaKnown RBP12.59□□□□□ -0.39
PRE10YOR362C ESP1Q03018 1630 aa12.59□□□□□ -0.39
PRE10YOR362C MYO2P19524 1574 aaKnown RBP12.55□□□□□ -0.4
PRE10YOR362C YPK9Q12697 1472 aa12.44□□□□□ -0.42
PRE10YOR362C SCC2Q04002 1493 aa12.34□□□□□ -0.43
PRE10YOR362C BPT1P14772 1559 aa12.33□□□□□ -0.44
PRE10YOR362C UFD4P33202 1483 aa12.33□□□□□ -0.44
PRE10YOR362C RPO31P04051 1460 aa12.29□□□□□ -0.44
PRE10YOR362C MTC1P47018 478 aaKnown RBP12.28□□□□□ -0.44
PRE10YOR362C POL1P13382 1468 aa12.27□□□□□ -0.45
PRE10YOR362C TOP2P06786 1428 aaKnown RBP12.2□□□□□ -0.46
PRE10YOR362C RKR1Q04781 1562 aa12.19□□□□□ -0.46
PRE10YOR362C STU1P38198 1513 aa12.19□□□□□ -0.46
PRE10YOR362C YCF1P39109 1515 aaKnown RBP12.17□□□□□ -0.46
PRE10YOR362C YTA7P40340 1379 aa12.12□□□□□ -0.47
PRE10YOR362C YOR1P53049 1477 aa12.12□□□□□ -0.47
PRE10YOR362C SMC4Q12267 1418 aa12.11□□□□□ -0.47
PRE10YOR362C RQC2Q12532 1038 aaKnown RBP12.1□□□□□ -0.47
PRE10YOR362C TY2B-LR1P0C2J3 1770 aa12.09□□□□□ -0.47
PRE10YOR362C TY2B-FP0CX63 1770 aa12.09□□□□□ -0.47
PRE10YOR362C TY2B-GR2P0CX64 1770 aa12.09□□□□□ -0.47
PRE10YOR362C TY2B-CP25384 1770 aa12.09□□□□□ -0.47
PRE10YOR362C TY2B-DR2Q03494 1770 aa12.09□□□□□ -0.47
PRE10YOR362C TY1B-DR1Q03855 1755 aa12.09□□□□□ -0.47
PRE10YOR362C TY2B-DR3Q07791 1770 aaKnown RBP12.09□□□□□ -0.47
PRE10YOR362C TY2B-OR1Q12113 1770 aa12.09□□□□□ -0.47
PRE10YOR362C TY2B-DR1Q12472 1770 aa12.09□□□□□ -0.47
PRE10YOR362C TY2B-OR2Q12501 1770 aa12.09□□□□□ -0.47
PRE10YOR362C CHD1P32657 1468 aa12.04□□□□□ -0.48
PRE10YOR362C CDC25P04821 1589 aa12.02□□□□□ -0.49
PRE10YOR362C MMS22Q06164 1454 aa11.99□□□□□ -0.49
PRE10YOR362C TY1B-DR3Q99231 1755 aa11.98□□□□□ -0.49
PRE10YOR362C MYO4P32492 1471 aa11.98□□□□□ -0.49
PRE10YOR362C PAN1P32521 1480 aa11.97□□□□□ -0.49
PRE10YOR362C TY2B-BQ12491 1770 aa11.97□□□□□ -0.49
PRE10YOR362C TY1B-BRQ12193 1756 aa11.96□□□□□ -0.49
PRE10YOR362C TY1B-GR3Q12316 1755 aa11.96□□□□□ -0.49
PRE10YOR362C TY1B-ORQ92393 1755 aa11.96□□□□□ -0.49
PRE10YOR362C SPP41P38904 1435 aa11.93□□□□□ -0.5
PRE10YOR362C TY1B-HO13535 1793 aa11.91□□□□□ -0.5
PRE10YOR362C TY1B-DR5P0C2I2 1755 aa11.91□□□□□ -0.5
PRE10YOR362C TY1B-DR6P0C2I3 1755 aa11.91□□□□□ -0.5
PRE10YOR362C TY1B-LR2P0C2I5 1755 aa11.91□□□□□ -0.5
PRE10YOR362C TY1B-LR3P0C2I6 1755 aaKnown RBP11.91□□□□□ -0.5
PRE10YOR362C TY1B-PR1P0C2I9 1755 aaKnown RBP11.91□□□□□ -0.5
PRE10YOR362C TY1B-PR2P0C2J0 1756 aa11.91□□□□□ -0.5
PRE10YOR362C TY1B-PR3P0C2J1 1755 aaKnown RBP11.91□□□□□ -0.5
PRE10YOR362C TY1B-JR1P47098 1755 aa11.91□□□□□ -0.5
PRE10YOR362C TY1B-ML2Q03434 1755 aaKnown RBP11.91□□□□□ -0.5
PRE10YOR362C TY1B-ER1Q03612 1755 aa11.91□□□□□ -0.5
PRE10YOR362C TY1B-ML1Q04711 1755 aaKnown RBP11.91□□□□□ -0.5
PRE10YOR362C TY1B-GR2Q12269 1755 aa11.91□□□□□ -0.5
PRE10YOR362C TY1B-OLQ12273 1755 aa11.91□□□□□ -0.5
PRE10YOR362C TY1B-PLQ12414 1755 aaKnown RBP11.91□□□□□ -0.5
PRE10YOR362C ESC1Q03661 1658 aaKnown RBP11.88□□□□□ -0.51
PRE10YOR362C TRM732Q03496 1420 aa11.86□□□□□ -0.51
PRE10YOR362C SAS10Q12136 610 aaPredicted RBP11.85□□□□□ -0.51
PRE10YOR362C TSC11P40061 1430 aa11.84□□□□□ -0.51
PRE10YOR362C TAF7Q05021 590 aa11.83□□□□□ -0.52
PRE10YOR362C DNF1P32660 1571 aa11.83□□□□□ -0.52
PRE10YOR362C VTH1P40438 1549 aa11.81□□□□□ -0.52
PRE10YOR362C VTH2P40890 1549 aa11.81□□□□□ -0.52
PRE10YOR362C STH1P32597 1359 aa11.8□□□□□ -0.52
PRE10YOR362C RPA190P10964 1664 aaKnown RBP11.78□□□□□ -0.52
PRE10YOR362C SNQ2P32568 1501 aaKnown RBP11.78□□□□□ -0.52
PRE10YOR362C MET5P47169 1442 aa11.77□□□□□ -0.53
PRE10YOR362C TY1B-JR2P47100 1755 aaKnown RBP11.71□□□□□ -0.54
PRE10YOR362C TY1B-ER2Q03619 1755 aa11.71□□□□□ -0.54
PRE10YOR362C TY1B-MR1Q04214 1755 aa11.71□□□□□ -0.54
PRE10YOR362C TY1B-MR2Q04670 1755 aaKnown RBP11.71□□□□□ -0.54
PRE10YOR362C TY1B-LR1Q12088 1755 aaKnown RBP11.71□□□□□ -0.54
PRE10YOR362C TY1B-NL1Q12112 1755 aa11.71□□□□□ -0.54
PRE10YOR362C TY1B-GR1Q12141 1755 aa11.71□□□□□ -0.54
PRE10YOR362C TY1B-BLQ12490 1755 aa11.71□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms