RNA–Protein interactions for RNA: YOR259C

RPT4, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT4YOR259C MTC1P47018 478 aaKnown RBP13.14□□□□□ -0.31
RPT4YOR259C DRS1P32892 752 aaKnown RBP12.71□□□□□ -0.37
RPT4YOR259C FAP1P53971 965 aa11.3□□□□□ -0.6
RPT4YOR259C DIP2Q12220 943 aaPredicted RBP10.98□□□□□ -0.65
RPT4YOR259C PRI1P10363 409 aa10.82□□□□□ -0.68
RPT4YOR259C BFR2Q06631 534 aaKnown RBP10.79□□□□□ -0.68
RPT4YOR259C ISW2Q08773 1120 aa10.79□□□□□ -0.68
RPT4YOR259C AVT3P36062 692 aa10.72□□□□□ -0.69
RPT4YOR259C AAD16Q02895 342 aa10.69□□□□□ -0.7
RPT4YOR259C RPG1P38249 964 aaKnown RBP10.64□□□□□ -0.71
RPT4YOR259C PRY3P47033 881 aa10.59□□□□□ -0.71
RPT4YOR259C RSE1Q04693 1361 aaKnown RBP10.49□□□□□ -0.73
RPT4YOR259C TSR3Q12094 313 aaKnown RBP10.25□□□□□ -0.77
RPT4YOR259C RPL17AP05740 184 aaKnown RBP10.13□□□□□ -0.79
RPT4YOR259C RPL17BP46990 184 aaKnown RBP10.13□□□□□ -0.79
RPT4YOR259C REB1P21538 810 aa10.05□□□□□ -0.8
RPT4YOR259C YCK3P39962 524 aa10.04□□□□□ -0.8
RPT4YOR259C HAA1Q12753 694 aaKnown RBP9.98□□□□□ -0.81
RPT4YOR259C MRPL32P25348 183 aa9.83□□□□□ -0.84
RPT4YOR259C TFA1P36100 482 aa9.82□□□□□ -0.84
RPT4YOR259C SPT21P35209 758 aa9.75□□□□□ -0.85
RPT4YOR259C YKR023WP36119 530 aaKnown RBP9.52□□□□□ -0.89
RPT4YOR259C RIM101P33400 625 aa9.5□□□□□ -0.89
RPT4YOR259C CDC27P38042 758 aa9.44□□□□□ -0.9
RPT4YOR259C SGS1P35187 1447 aa9.37□□□□□ -0.91
RPT4YOR259C TFC8Q12308 588 aa9.33□□□□□ -0.92
RPT4YOR259C HOP09932 586 aa9.31□□□□□ -0.92
RPT4YOR259C YGL015CP33199 130 aa9.3□□□□□ -0.92
RPT4YOR259C DCD1P06773 312 aa9.27□□□□□ -0.93
RPT4YOR259C INO80P53115 1489 aa9.26□□□□□ -0.93
RPT4YOR259C MON2P48563 1636 aaPredicted RBP9.23□□□□□ -0.93
RPT4YOR259C TCB3Q03640 1545 aaKnown RBP9.2□□□□□ -0.94
RPT4YOR259C OXP1P28273 1286 aa9.18□□□□□ -0.94
RPT4YOR259C TY1B-DR4Q07793 1604 aa9.14□□□□□ -0.95
RPT4YOR259C UBP10P53874 792 aaPredicted RBP9.13□□□□□ -0.95
RPT4YOR259C MAP2P38174 421 aaKnown RBP9.09□□□□□ -0.95
RPT4YOR259C BCH2P36122 765 aa9.04□□□□□ -0.96
RPT4YOR259C YIL055CP40523 627 aaKnown RBP9.04□□□□□ -0.96
RPT4YOR259C PTP3P40048 928 aa9.03□□□□□ -0.96
RPT4YOR259C SCY1P53009 804 aa8.99□□□□□ -0.97
RPT4YOR259C SWR1Q05471 1514 aa8.98□□□□□ -0.97
RPT4YOR259C YAH1Q12184 172 aaKnown RBP8.97□□□□□ -0.97
RPT4YOR259C HSL1P34244 1518 aa8.92□□□□□ -0.98
RPT4YOR259C RSM7P47150 247 aa8.91□□□□□ -0.98
RPT4YOR259C SPA2P23201 1466 aaKnown RBP8.9□□□□□ -0.98
RPT4YOR259C SSN2P38931 1420 aa8.89□□□□□ -0.99
RPT4YOR259C SPT6P23615 1451 aaKnown RBP8.88□□□□□ -0.99
RPT4YOR259C SLX5P32828 619 aaKnown RBP8.85□□□□□ -0.99
RPT4YOR259C SSP1P38871 571 aa8.85□□□□□ -0.99
RPT4YOR259C EPS1P40557 701 aa8.85□□□□□ -0.99
RPT4YOR259C YLR271WQ06152 274 aa8.84□□□□□ -0.99
RPT4YOR259C AI2P03876 854 aa8.8□□□□□ -1
RPT4YOR259C BDF1P35817 686 aa8.8□□□□□ -1
RPT4YOR259C BBC1P47068 1157 aa8.77□□□□□ -1.01
RPT4YOR259C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.76□□□□□ -1.01not detected
RPT4YOR259C DNA2P38859 1522 aa8.75□□□□□ -1.01
RPT4YOR259C HIR3P47171 1648 aa8.75□□□□□ -1.01
RPT4YOR259C TIF4632P39936 914 aaKnown RBP8.74□□□□□ -1.01
RPT4YOR259C KOG1P38873 1557 aa8.71□□□□□ -1.02
RPT4YOR259C TGL3P40308 642 aa8.68□□□□□ -1.02
RPT4YOR259C PSD2P53037 1138 aaKnown RBP8.68□□□□□ -1.02
RPT4YOR259C XRN1P22147 1528 aaKnown RBP8.65□□□□□ -1.02
RPT4YOR259C MGA2P40578 1113 aa8.59□□□□□ -1.03
RPT4YOR259C CST9Q06032 482 aa8.56□□□□□ -1.04
RPT4YOR259C REV3P14284 1504 aa8.54□□□□□ -1.04
RPT4YOR259C MRM1P25270 412 aa8.51□□□□□ -1.05
RPT4YOR259C THO2P53552 1597 aaKnown RBP8.51□□□□□ -1.05
RPT4YOR259C BUD4P47136 1447 aa8.48□□□□□ -1.05
RPT4YOR259C SIN3P22579 1536 aa8.48□□□□□ -1.05
RPT4YOR259C NSR1P27476 414 aaKnown RBP RIP-Chip data8.47□□□□□ -1.05not detected
RPT4YOR259C ECM5Q03214 1411 aa8.45□□□□□ -1.06
RPT4YOR259C SSK2P53599 1579 aa8.44□□□□□ -1.06
RPT4YOR259C BUD31P25337 157 aaPredicted RBP8.41□□□□□ -1.06
RPT4YOR259C ATG2P53855 1592 aa8.4□□□□□ -1.07
RPT4YOR259C YAP5P40574 245 aa8.39□□□□□ -1.07
RPT4YOR259C TAF2P23255 1407 aa8.39□□□□□ -1.07
RPT4YOR259C MST1P07236 462 aa8.38□□□□□ -1.07
RPT4YOR259C YOR238WQ08634 303 aa8.38□□□□□ -1.07
RPT4YOR259C ESP1Q03018 1630 aa8.37□□□□□ -1.07
RPT4YOR259C MDS3P53094 1487 aa8.36□□□□□ -1.07
RPT4YOR259C RTG3P38165 486 aa8.35□□□□□ -1.07
RPT4YOR259C PEP1P32319 1579 aa8.35□□□□□ -1.07
RPT4YOR259C RCR1P38212 213 aa8.31□□□□□ -1.08
RPT4YOR259C MYO2P19524 1574 aaKnown RBP8.31□□□□□ -1.08
RPT4YOR259C VPS29P38759 282 aa8.3□□□□□ -1.08
RPT4YOR259C SKI3P17883 1432 aaKnown RBP8.28□□□□□ -1.08
RPT4YOR259C UBP9P39967 754 aa8.28□□□□□ -1.08
RPT4YOR259C YMR1P47147 688 aaKnown RBP RIP-Chip data8.27□□□□□ -1.09not detected
RPT4YOR259C PIB1Q06651 286 aa8.25□□□□□ -1.09
RPT4YOR259C YPK9Q12697 1472 aa8.23□□□□□ -1.09
RPT4YOR259C DBP1P24784 617 aaKnown RBP8.22□□□□□ -1.09
RPT4YOR259C STS1P38637 319 aa8.22□□□□□ -1.09
RPT4YOR259C RAM2P29703 316 aa8.19□□□□□ -1.1
RPT4YOR259C GTT3P39996 337 aa8.19□□□□□ -1.1
RPT4YOR259C YFR006WP43590 535 aa8.19□□□□□ -1.1
RPT4YOR259C YBL029C-AQ3E756 94 aa8.17□□□□□ -1.1
RPT4YOR259C SCC2Q04002 1493 aa8.17□□□□□ -1.1
RPT4YOR259C POL1P13382 1468 aa8.13□□□□□ -1.11
RPT4YOR259C RPO31P04051 1460 aa8.12□□□□□ -1.11
RPT4YOR259C VMA1P17255 1071 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms