RNA–Protein interactions for RNA: YOR157C

PUP1, Transcript of Beta 2 subunit of the 20S proteasome, yeastyeast

Gene PUP1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP1YOR157C MON2P48563 1636 aaPredicted RBP19.82■□□□□ 0.76
PUP1YOR157C INO80P53115 1489 aa19.8■□□□□ 0.76
PUP1YOR157C DNA2P38859 1522 aa18.9■□□□□ 0.62
PUP1YOR157C SWR1Q05471 1514 aa18.69■□□□□ 0.58
PUP1YOR157C KOG1P38873 1557 aa18.5■□□□□ 0.55
PUP1YOR157C RSE1Q04693 1361 aaKnown RBP18.45■□□□□ 0.54
PUP1YOR157C TY1B-DR4Q07793 1604 aa18.29■□□□□ 0.52
PUP1YOR157C TCB3Q03640 1545 aaKnown RBP18.22■□□□□ 0.51
PUP1YOR157C SGS1P35187 1447 aa17.64■□□□□ 0.42
PUP1YOR157C HSL1P34244 1518 aa17.55■□□□□ 0.4
PUP1YOR157C SPT6P23615 1451 aaKnown RBP17.53■□□□□ 0.4
PUP1YOR157C SPA2P23201 1466 aaKnown RBP17.52■□□□□ 0.4
PUP1YOR157C ECM5Q03214 1411 aa17.38■□□□□ 0.37
PUP1YOR157C MTC1P47018 478 aaKnown RBP17.38■□□□□ 0.37
PUP1YOR157C BUD4P47136 1447 aa17.15■□□□□ 0.34
PUP1YOR157C HIR3P47171 1648 aa17.14■□□□□ 0.33
PUP1YOR157C THO2P53552 1597 aaKnown RBP17.13■□□□□ 0.33
PUP1YOR157C MDS3P53094 1487 aa17.06■□□□□ 0.32
PUP1YOR157C REV3P14284 1504 aa16.85■□□□□ 0.29
PUP1YOR157C PEP1P32319 1579 aa16.82■□□□□ 0.28
PUP1YOR157C XRN1P22147 1528 aaKnown RBP16.75■□□□□ 0.27
PUP1YOR157C BPT1P14772 1559 aa16.66■□□□□ 0.26
PUP1YOR157C ATG2P53855 1592 aa16.64■□□□□ 0.25
PUP1YOR157C YCF1P39109 1515 aaKnown RBP16.35■□□□□ 0.21
PUP1YOR157C SKI3P17883 1432 aaKnown RBP16.31■□□□□ 0.2
PUP1YOR157C TAF2P23255 1407 aa16.28■□□□□ 0.2
PUP1YOR157C MIF2P35201 549 aa16.23■□□□□ 0.19
PUP1YOR157C SSK2P53599 1579 aa16.22■□□□□ 0.19
PUP1YOR157C SIN3P22579 1536 aa16.1■□□□□ 0.17
PUP1YOR157C UFD4P33202 1483 aa16.03■□□□□ 0.16
PUP1YOR157C SSN2P38931 1420 aa15.98■□□□□ 0.15
PUP1YOR157C ESP1Q03018 1630 aa15.97■□□□□ 0.15
PUP1YOR157C MYO2P19524 1574 aaKnown RBP15.89■□□□□ 0.13
PUP1YOR157C DNF1P32660 1571 aa15.89■□□□□ 0.13
PUP1YOR157C MET5P47169 1442 aa15.87■□□□□ 0.13
PUP1YOR157C ESC1Q03661 1658 aaKnown RBP15.87■□□□□ 0.13
PUP1YOR157C CDC25P04821 1589 aa15.85■□□□□ 0.13
PUP1YOR157C SCC2Q04002 1493 aa15.83■□□□□ 0.12
PUP1YOR157C CHD1P32657 1468 aa15.82■□□□□ 0.12
PUP1YOR157C BNI1P41832 1953 aa15.8■□□□□ 0.12
PUP1YOR157C LTE1P07866 1435 aa15.8■□□□□ 0.12
PUP1YOR157C RPA190P10964 1664 aaKnown RBP15.76■□□□□ 0.11
PUP1YOR157C YPK9Q12697 1472 aa15.74■□□□□ 0.11
PUP1YOR157C RQC2Q12532 1038 aaKnown RBP15.74■□□□□ 0.11
PUP1YOR157C TY2B-LR1P0C2J3 1770 aa15.72■□□□□ 0.11
PUP1YOR157C TY2B-FP0CX63 1770 aa15.72■□□□□ 0.11
PUP1YOR157C TY2B-GR2P0CX64 1770 aa15.72■□□□□ 0.11
PUP1YOR157C TY2B-CP25384 1770 aa15.72■□□□□ 0.11
PUP1YOR157C TY2B-DR2Q03494 1770 aa15.72■□□□□ 0.11
PUP1YOR157C TY1B-DR1Q03855 1755 aa15.72■□□□□ 0.11
PUP1YOR157C TY2B-DR3Q07791 1770 aaKnown RBP15.72■□□□□ 0.11
PUP1YOR157C TY2B-OR1Q12113 1770 aa15.72■□□□□ 0.11
PUP1YOR157C TY1B-BRQ12193 1756 aa15.72■□□□□ 0.11
PUP1YOR157C TY1B-GR3Q12316 1755 aa15.72■□□□□ 0.11
PUP1YOR157C TY2B-DR1Q12472 1770 aa15.72■□□□□ 0.11
PUP1YOR157C TY2B-OR2Q12501 1770 aa15.72■□□□□ 0.11
PUP1YOR157C TY1B-ORQ92393 1755 aa15.72■□□□□ 0.11
PUP1YOR157C RKR1Q04781 1562 aa15.7■□□□□ 0.1
PUP1YOR157C YFR006WP43590 535 aa15.7■□□□□ 0.1
PUP1YOR157C RPO31P04051 1460 aa15.69■□□□□ 0.1
PUP1YOR157C ITT1Q04638 464 aa15.67■□□□□ 0.1
PUP1YOR157C ABP1P15891 592 aaKnown RBP15.65■□□□□ 0.1
PUP1YOR157C PAN1P32521 1480 aa15.63■□□□□ 0.09
PUP1YOR157C GEA2P39993 1459 aaKnown RBP15.59■□□□□ 0.09
PUP1YOR157C TY2B-BQ12491 1770 aa15.49■□□□□ 0.07
PUP1YOR157C MMS1Q06211 1407 aa15.49■□□□□ 0.07
PUP1YOR157C TY1B-HO13535 1793 aa15.49■□□□□ 0.07
PUP1YOR157C TY1B-DR5P0C2I2 1755 aa15.49■□□□□ 0.07
PUP1YOR157C TY1B-DR6P0C2I3 1755 aa15.49■□□□□ 0.07
PUP1YOR157C TY1B-LR2P0C2I5 1755 aa15.49■□□□□ 0.07
PUP1YOR157C TY1B-LR3P0C2I6 1755 aaKnown RBP15.49■□□□□ 0.07
PUP1YOR157C TY1B-PR1P0C2I9 1755 aaKnown RBP15.49■□□□□ 0.07
PUP1YOR157C TY1B-PR2P0C2J0 1756 aa15.49■□□□□ 0.07
PUP1YOR157C TY1B-PR3P0C2J1 1755 aaKnown RBP15.49■□□□□ 0.07
PUP1YOR157C TY1B-JR1P47098 1755 aa15.49■□□□□ 0.07
PUP1YOR157C TY1B-ML2Q03434 1755 aaKnown RBP15.49■□□□□ 0.07
PUP1YOR157C TY1B-ER1Q03612 1755 aa15.49■□□□□ 0.07
PUP1YOR157C TY1B-ML1Q04711 1755 aaKnown RBP15.49■□□□□ 0.07
PUP1YOR157C TY1B-GR2Q12269 1755 aa15.49■□□□□ 0.07
PUP1YOR157C TY1B-OLQ12273 1755 aa15.49■□□□□ 0.07
PUP1YOR157C TY1B-PLQ12414 1755 aaKnown RBP15.49■□□□□ 0.07
PUP1YOR157C DRS1P32892 752 aaKnown RBP15.41■□□□□ 0.06
PUP1YOR157C TY1B-DR3Q99231 1755 aa15.41■□□□□ 0.06
PUP1YOR157C YRF1-1P0CX20 1796 aa15.38■□□□□ 0.05
PUP1YOR157C YRF1-5P0CX21 1796 aa15.38■□□□□ 0.05
PUP1YOR157C YRF1-8P0CX22 1796 aa15.38■□□□□ 0.05
PUP1YOR157C MMS22Q06164 1454 aa15.38■□□□□ 0.05
PUP1YOR157C IRC20Q06554 1556 aa15.37■□□□□ 0.05
PUP1YOR157C TOP2P06786 1428 aaKnown RBP15.36■□□□□ 0.05
PUP1YOR157C TRM732Q03496 1420 aa15.34■□□□□ 0.05
PUP1YOR157C DRS2P39524 1355 aa15.31■□□□□ 0.04
PUP1YOR157C VPS15P22219 1454 aa15.26■□□□□ 0.03
PUP1YOR157C NUP159P40477 1460 aa15.25■□□□□ 0.03
PUP1YOR157C DNF2Q12675 1612 aa15.18■□□□□ 0.02
PUP1YOR157C TY1B-JR2P47100 1755 aaKnown RBP15.16■□□□□ 0.02
PUP1YOR157C TY1B-ER2Q03619 1755 aa15.16■□□□□ 0.02
PUP1YOR157C TY1B-MR1Q04214 1755 aa15.16■□□□□ 0.02
PUP1YOR157C TY1B-MR2Q04670 1755 aaKnown RBP15.16■□□□□ 0.02
PUP1YOR157C TY1B-LR1Q12088 1755 aaKnown RBP15.16■□□□□ 0.02
PUP1YOR157C TY1B-NL1Q12112 1755 aa15.16■□□□□ 0.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms