RNA–Protein interactions for RNA: YOR117W

RPT5, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT5, Length 1,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT5YOR117W SGS1P35187 1447 aa16.9■□□□□ 0.3
RPT5YOR117W INO80P53115 1489 aa16.83■□□□□ 0.28
RPT5YOR117W MON2P48563 1636 aaPredicted RBP16.81■□□□□ 0.28
RPT5YOR117W TCB3Q03640 1545 aaKnown RBP16.65■□□□□ 0.26
RPT5YOR117W TY1B-DR4Q07793 1604 aa16.43■□□□□ 0.22
RPT5YOR117W SWR1Q05471 1514 aa16.31■□□□□ 0.2
RPT5YOR117W HSL1P34244 1518 aa16.05■□□□□ 0.16
RPT5YOR117W SPT6P23615 1451 aaKnown RBP16.04■□□□□ 0.16
RPT5YOR117W DNA2P38859 1522 aa16.03■□□□□ 0.16
RPT5YOR117W SPA2P23201 1466 aaKnown RBP15.95■□□□□ 0.14
RPT5YOR117W KOG1P38873 1557 aa15.91■□□□□ 0.14
RPT5YOR117W SSN2P38931 1420 aa15.89■□□□□ 0.13
RPT5YOR117W HIR3P47171 1648 aa15.74■□□□□ 0.11
RPT5YOR117W MTC1P47018 478 aaKnown RBP15.72■□□□□ 0.11
RPT5YOR117W FAP1P53971 965 aa15.62■□□□□ 0.09
RPT5YOR117W XRN1P22147 1528 aaKnown RBP15.58■□□□□ 0.09
RPT5YOR117W DRS1P32892 752 aaKnown RBP15.44■□□□□ 0.06
RPT5YOR117W ECM5Q03214 1411 aa15.42■□□□□ 0.06
RPT5YOR117W BUD4P47136 1447 aa15.4■□□□□ 0.06
RPT5YOR117W THO2P53552 1597 aaKnown RBP15.38■□□□□ 0.05
RPT5YOR117W REV3P14284 1504 aa15.33■□□□□ 0.04
RPT5YOR117W SIN3P22579 1536 aa15.2■□□□□ 0.02
RPT5YOR117W MDS3P53094 1487 aa15.16■□□□□ 0.02
RPT5YOR117W TAF2P23255 1407 aa15.15■□□□□ 0.02
RPT5YOR117W RSE1Q04693 1361 aaKnown RBP15.1■□□□□ 0.01
RPT5YOR117W ATG2P53855 1592 aa15.1■□□□□ 0.01
RPT5YOR117W SSK2P53599 1579 aa15.07■□□□□ 0
RPT5YOR117W PEP1P32319 1579 aa15.07■□□□□ 0
RPT5YOR117W SKI3P17883 1432 aaKnown RBP15.02□□□□□ -0.01
RPT5YOR117W ESP1Q03018 1630 aa14.95□□□□□ -0.02
RPT5YOR117W MYO2P19524 1574 aaKnown RBP14.86□□□□□ -0.03
RPT5YOR117W YPK9Q12697 1472 aa14.81□□□□□ -0.04
RPT5YOR117W PRY3P47033 881 aa14.71□□□□□ -0.05
RPT5YOR117W BPT1P14772 1559 aa14.7□□□□□ -0.06
RPT5YOR117W SCC2Q04002 1493 aa14.7□□□□□ -0.06
RPT5YOR117W UFD4P33202 1483 aa14.68□□□□□ -0.06
RPT5YOR117W RPO31P04051 1460 aa14.65□□□□□ -0.06
RPT5YOR117W POL1P13382 1468 aa14.57□□□□□ -0.08
RPT5YOR117W YCF1P39109 1515 aaKnown RBP14.51□□□□□ -0.09
RPT5YOR117W TOP2P06786 1428 aaKnown RBP14.5□□□□□ -0.09
RPT5YOR117W STU1P38198 1513 aa14.47□□□□□ -0.09
RPT5YOR117W RKR1Q04781 1562 aa14.47□□□□□ -0.09
RPT5YOR117W YOR1P53049 1477 aa14.4□□□□□ -0.1
RPT5YOR117W TY2B-LR1P0C2J3 1770 aa14.38□□□□□ -0.11
RPT5YOR117W TY2B-FP0CX63 1770 aa14.38□□□□□ -0.11
RPT5YOR117W TY2B-GR2P0CX64 1770 aa14.38□□□□□ -0.11
RPT5YOR117W TY2B-CP25384 1770 aa14.38□□□□□ -0.11
RPT5YOR117W TY2B-DR2Q03494 1770 aa14.38□□□□□ -0.11
RPT5YOR117W TY1B-DR1Q03855 1755 aa14.38□□□□□ -0.11
RPT5YOR117W TY2B-DR3Q07791 1770 aaKnown RBP14.38□□□□□ -0.11
RPT5YOR117W TY2B-OR1Q12113 1770 aa14.38□□□□□ -0.11
RPT5YOR117W TY2B-DR1Q12472 1770 aa14.38□□□□□ -0.11
RPT5YOR117W TY2B-OR2Q12501 1770 aa14.38□□□□□ -0.11
RPT5YOR117W SMC4Q12267 1418 aa14.37□□□□□ -0.11
RPT5YOR117W CHD1P32657 1468 aa14.37□□□□□ -0.11
RPT5YOR117W RQC2Q12532 1038 aaKnown RBP14.36□□□□□ -0.11
RPT5YOR117W YTA7P40340 1379 aa14.33□□□□□ -0.12
RPT5YOR117W CDC25P04821 1589 aa14.33□□□□□ -0.12
RPT5YOR117W PAN1P32521 1480 aa14.27□□□□□ -0.13
RPT5YOR117W MMS22Q06164 1454 aa14.26□□□□□ -0.13
RPT5YOR117W TY1B-DR3Q99231 1755 aa14.25□□□□□ -0.13
RPT5YOR117W TY1B-BRQ12193 1756 aa14.24□□□□□ -0.13
RPT5YOR117W TY1B-GR3Q12316 1755 aa14.24□□□□□ -0.13
RPT5YOR117W TY2B-BQ12491 1770 aa14.24□□□□□ -0.13
RPT5YOR117W TY1B-ORQ92393 1755 aa14.24□□□□□ -0.13
RPT5YOR117W MYO4P32492 1471 aa14.2□□□□□ -0.14
RPT5YOR117W SPP41P38904 1435 aa14.19□□□□□ -0.14
RPT5YOR117W TY1B-HO13535 1793 aa14.18□□□□□ -0.14
RPT5YOR117W TY1B-DR5P0C2I2 1755 aa14.18□□□□□ -0.14
RPT5YOR117W TY1B-DR6P0C2I3 1755 aa14.18□□□□□ -0.14
RPT5YOR117W TY1B-LR2P0C2I5 1755 aa14.18□□□□□ -0.14
RPT5YOR117W TY1B-LR3P0C2I6 1755 aaKnown RBP14.18□□□□□ -0.14
RPT5YOR117W TY1B-PR1P0C2I9 1755 aaKnown RBP14.18□□□□□ -0.14
RPT5YOR117W TY1B-PR2P0C2J0 1756 aa14.18□□□□□ -0.14
RPT5YOR117W TY1B-PR3P0C2J1 1755 aaKnown RBP14.18□□□□□ -0.14
RPT5YOR117W TY1B-JR1P47098 1755 aa14.18□□□□□ -0.14
RPT5YOR117W TY1B-ML2Q03434 1755 aaKnown RBP14.18□□□□□ -0.14
RPT5YOR117W TY1B-ER1Q03612 1755 aa14.18□□□□□ -0.14
RPT5YOR117W TY1B-ML1Q04711 1755 aaKnown RBP14.18□□□□□ -0.14
RPT5YOR117W TY1B-GR2Q12269 1755 aa14.18□□□□□ -0.14
RPT5YOR117W TY1B-OLQ12273 1755 aa14.18□□□□□ -0.14
RPT5YOR117W TY1B-PLQ12414 1755 aaKnown RBP14.18□□□□□ -0.14
RPT5YOR117W DNF1P32660 1571 aa14.15□□□□□ -0.14
RPT5YOR117W ESC1Q03661 1658 aaKnown RBP14.13□□□□□ -0.15
RPT5YOR117W AAD16Q02895 342 aa14.11□□□□□ -0.15
RPT5YOR117W TSC11P40061 1430 aa14.09□□□□□ -0.15
RPT5YOR117W TRM732Q03496 1420 aa14.09□□□□□ -0.15
RPT5YOR117W VTH1P40438 1549 aa14.05□□□□□ -0.16
RPT5YOR117W VTH2P40890 1549 aa14.05□□□□□ -0.16
RPT5YOR117W MET5P47169 1442 aa14.04□□□□□ -0.16
RPT5YOR117W RPA190P10964 1664 aaKnown RBP14.03□□□□□ -0.16
RPT5YOR117W PRI1P10363 409 aa14.02□□□□□ -0.17
RPT5YOR117W SAS10Q12136 610 aaPredicted RBP14□□□□□ -0.17
RPT5YOR117W STH1P32597 1359 aa13.98□□□□□ -0.17
RPT5YOR117W SNQ2P32568 1501 aaKnown RBP13.97□□□□□ -0.17
RPT5YOR117W TAF7Q05021 590 aa13.93□□□□□ -0.18
RPT5YOR117W TY1B-JR2P47100 1755 aaKnown RBP13.92□□□□□ -0.18
RPT5YOR117W TY1B-ER2Q03619 1755 aa13.92□□□□□ -0.18
RPT5YOR117W TY1B-MR1Q04214 1755 aa13.92□□□□□ -0.18
RPT5YOR117W TY1B-MR2Q04670 1755 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms