RNA–Protein interactions for RNA: YOR108W

LEU9, Transcript of Alpha-isopropylmalate synthase II (2-isopropylmalate synthase), yeastyeast

Gene LEU9, Length 1,815 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LEU9YOR108W SGS1P35187 1447 aa16.85■□□□□ 0.29
LEU9YOR108W INO80P53115 1489 aa16.46■□□□□ 0.23
LEU9YOR108W TCB3Q03640 1545 aaKnown RBP16.31■□□□□ 0.2
LEU9YOR108W MON2P48563 1636 aaPredicted RBP16.14■□□□□ 0.17
LEU9YOR108W TY1B-DR4Q07793 1604 aa16.09■□□□□ 0.17
LEU9YOR108W SSN2P38931 1420 aa16.01■□□□□ 0.15
LEU9YOR108W SPA2P23201 1466 aaKnown RBP15.96■□□□□ 0.15
LEU9YOR108W SWR1Q05471 1514 aa15.84■□□□□ 0.13
LEU9YOR108W HSL1P34244 1518 aa15.81■□□□□ 0.12
LEU9YOR108W SPT6P23615 1451 aaKnown RBP15.8■□□□□ 0.12
LEU9YOR108W DRS1P32892 752 aaKnown RBP15.63■□□□□ 0.09
LEU9YOR108W HIR3P47171 1648 aa15.53■□□□□ 0.08
LEU9YOR108W XRN1P22147 1528 aaKnown RBP15.46■□□□□ 0.06
LEU9YOR108W DNA2P38859 1522 aa15.46■□□□□ 0.06
LEU9YOR108W KOG1P38873 1557 aa15.34■□□□□ 0.05
LEU9YOR108W REV3P14284 1504 aa15.2■□□□□ 0.02
LEU9YOR108W TAF2P23255 1407 aa15.13■□□□□ 0.01
LEU9YOR108W ECM5Q03214 1411 aa15.07■□□□□ 0
LEU9YOR108W BUD4P47136 1447 aa15.05■□□□□ 0
LEU9YOR108W SIN3P22579 1536 aa15.02■□□□□ -0
LEU9YOR108W THO2P53552 1597 aaKnown RBP15.02□□□□□ -0.01
LEU9YOR108W SSK2P53599 1579 aa14.95□□□□□ -0.02
LEU9YOR108W SKI3P17883 1432 aaKnown RBP14.88□□□□□ -0.03
LEU9YOR108W ESP1Q03018 1630 aa14.84□□□□□ -0.03
LEU9YOR108W ATG2P53855 1592 aa14.84□□□□□ -0.03
LEU9YOR108W MDS3P53094 1487 aa14.78□□□□□ -0.04
LEU9YOR108W MYO2P19524 1574 aaKnown RBP14.77□□□□□ -0.05
LEU9YOR108W PEP1P32319 1579 aa14.73□□□□□ -0.05
LEU9YOR108W YPK9Q12697 1472 aa14.64□□□□□ -0.07
LEU9YOR108W POL1P13382 1468 aa14.54□□□□□ -0.08
LEU9YOR108W SCC2Q04002 1493 aa14.53□□□□□ -0.08
LEU9YOR108W STU1P38198 1513 aa14.52□□□□□ -0.08
LEU9YOR108W UFD4P33202 1483 aa14.48□□□□□ -0.09
LEU9YOR108W RPO31P04051 1460 aa14.45□□□□□ -0.1
LEU9YOR108W RKR1Q04781 1562 aa14.42□□□□□ -0.1
LEU9YOR108W RSE1Q04693 1361 aaKnown RBP14.41□□□□□ -0.1
LEU9YOR108W YTA7P40340 1379 aa14.38□□□□□ -0.11
LEU9YOR108W TOP2P06786 1428 aaKnown RBP14.36□□□□□ -0.11
LEU9YOR108W YOR1P53049 1477 aa14.35□□□□□ -0.11
LEU9YOR108W BPT1P14772 1559 aa14.34□□□□□ -0.11
LEU9YOR108W YCF1P39109 1515 aaKnown RBP14.33□□□□□ -0.11
LEU9YOR108W MMS22Q06164 1454 aa14.3□□□□□ -0.12
LEU9YOR108W SAS10Q12136 610 aaPredicted RBP14.29□□□□□ -0.12
LEU9YOR108W RQC2Q12532 1038 aaKnown RBP14.29□□□□□ -0.12
LEU9YOR108W CHD1P32657 1468 aa14.29□□□□□ -0.12
LEU9YOR108W SMC4Q12267 1418 aa14.26□□□□□ -0.13
LEU9YOR108W TY2B-LR1P0C2J3 1770 aa14.25□□□□□ -0.13
LEU9YOR108W TY2B-FP0CX63 1770 aa14.25□□□□□ -0.13
LEU9YOR108W TY2B-GR2P0CX64 1770 aa14.25□□□□□ -0.13
LEU9YOR108W TY2B-CP25384 1770 aa14.25□□□□□ -0.13
LEU9YOR108W TY2B-DR2Q03494 1770 aa14.25□□□□□ -0.13
LEU9YOR108W TY1B-DR1Q03855 1755 aa14.25□□□□□ -0.13
LEU9YOR108W TY2B-DR3Q07791 1770 aaKnown RBP14.25□□□□□ -0.13
LEU9YOR108W TY2B-OR1Q12113 1770 aa14.25□□□□□ -0.13
LEU9YOR108W TY2B-DR1Q12472 1770 aa14.25□□□□□ -0.13
LEU9YOR108W TY2B-OR2Q12501 1770 aa14.25□□□□□ -0.13
LEU9YOR108W MTC1P47018 478 aaKnown RBP14.24□□□□□ -0.13
LEU9YOR108W MYO4P32492 1471 aa14.18□□□□□ -0.14
LEU9YOR108W TY1B-DR3Q99231 1755 aa14.16□□□□□ -0.14
LEU9YOR108W TY2B-BQ12491 1770 aa14.12□□□□□ -0.15
LEU9YOR108W SPP41P38904 1435 aa14.06□□□□□ -0.16
LEU9YOR108W STH1P32597 1359 aa14.06□□□□□ -0.16
LEU9YOR108W CDC25P04821 1589 aa14.05□□□□□ -0.16
LEU9YOR108W TY1B-BRQ12193 1756 aa14.05□□□□□ -0.16
LEU9YOR108W TY1B-GR3Q12316 1755 aa14.05□□□□□ -0.16
LEU9YOR108W TY1B-ORQ92393 1755 aa14.05□□□□□ -0.16
LEU9YOR108W TAF7Q05021 590 aa14.03□□□□□ -0.16
LEU9YOR108W TY1B-HO13535 1793 aa14.02□□□□□ -0.16
LEU9YOR108W TY1B-DR5P0C2I2 1755 aa14.02□□□□□ -0.16
LEU9YOR108W TY1B-DR6P0C2I3 1755 aa14.02□□□□□ -0.16
LEU9YOR108W TY1B-LR2P0C2I5 1755 aa14.02□□□□□ -0.16
LEU9YOR108W TY1B-LR3P0C2I6 1755 aaKnown RBP14.02□□□□□ -0.16
LEU9YOR108W TY1B-PR1P0C2I9 1755 aaKnown RBP14.02□□□□□ -0.16
LEU9YOR108W TY1B-PR2P0C2J0 1756 aa14.02□□□□□ -0.16
LEU9YOR108W TY1B-PR3P0C2J1 1755 aaKnown RBP14.02□□□□□ -0.16
LEU9YOR108W TY1B-JR1P47098 1755 aa14.02□□□□□ -0.16
LEU9YOR108W TY1B-ML2Q03434 1755 aaKnown RBP14.02□□□□□ -0.16
LEU9YOR108W TY1B-ER1Q03612 1755 aa14.02□□□□□ -0.16
LEU9YOR108W TY1B-ML1Q04711 1755 aaKnown RBP14.02□□□□□ -0.16
LEU9YOR108W TY1B-GR2Q12269 1755 aa14.02□□□□□ -0.16
LEU9YOR108W TY1B-OLQ12273 1755 aa14.02□□□□□ -0.16
LEU9YOR108W TY1B-PLQ12414 1755 aaKnown RBP14.02□□□□□ -0.16
LEU9YOR108W SNQ2P32568 1501 aaKnown RBP14.02□□□□□ -0.17
LEU9YOR108W PAN1P32521 1480 aa14.01□□□□□ -0.17
LEU9YOR108W TSC11P40061 1430 aa13.95□□□□□ -0.18
LEU9YOR108W IFH1P39520 1085 aa13.94□□□□□ -0.18
LEU9YOR108W VTH1P40438 1549 aa13.92□□□□□ -0.18
LEU9YOR108W VTH2P40890 1549 aa13.92□□□□□ -0.18
LEU9YOR108W ESC1Q03661 1658 aaKnown RBP13.89□□□□□ -0.19
LEU9YOR108W TRM732Q03496 1420 aa13.88□□□□□ -0.19
LEU9YOR108W MLP2P40457 1679 aa13.87□□□□□ -0.19
LEU9YOR108W PDR15Q04182 1529 aaKnown RBP13.86□□□□□ -0.19
LEU9YOR108W DNF1P32660 1571 aa13.86□□□□□ -0.19
LEU9YOR108W RTT106P40161 455 aa13.8□□□□□ -0.2
LEU9YOR108W TY1B-JR2P47100 1755 aaKnown RBP13.79□□□□□ -0.2
LEU9YOR108W TY1B-ER2Q03619 1755 aa13.79□□□□□ -0.2
LEU9YOR108W TY1B-MR1Q04214 1755 aa13.79□□□□□ -0.2
LEU9YOR108W TY1B-MR2Q04670 1755 aaKnown RBP13.79□□□□□ -0.2
LEU9YOR108W TY1B-LR1Q12088 1755 aaKnown RBP13.79□□□□□ -0.2
LEU9YOR108W TY1B-NL1Q12112 1755 aa13.79□□□□□ -0.2
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms