RNA–Protein interactions for RNA: YOR003W

YSP3, Transcript of Putative precursor to the subtilisin-like protease III, yeastyeast

Gene YSP3, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSP3YOR003W MON2P48563 1636 aaPredicted RBP20.85■□□□□ 0.93
YSP3YOR003W INO80P53115 1489 aa20.83■□□□□ 0.92
YSP3YOR003W SGS1P35187 1447 aa20.35■□□□□ 0.85
YSP3YOR003W TCB3Q03640 1545 aaKnown RBP20.24■□□□□ 0.83
YSP3YOR003W TY1B-DR4Q07793 1604 aa20.16■□□□□ 0.82
YSP3YOR003W SWR1Q05471 1514 aa20.1■□□□□ 0.81
YSP3YOR003W DNA2P38859 1522 aa19.89■□□□□ 0.77
YSP3YOR003W KOG1P38873 1557 aa19.64■□□□□ 0.73
YSP3YOR003W HSL1P34244 1518 aa19.58■□□□□ 0.73
YSP3YOR003W SPT6P23615 1451 aaKnown RBP19.54■□□□□ 0.72
YSP3YOR003W SPA2P23201 1466 aaKnown RBP19.4■□□□□ 0.7
YSP3YOR003W HIR3P47171 1648 aa19.19■□□□□ 0.66
YSP3YOR003W SSN2P38931 1420 aa19.01■□□□□ 0.63
YSP3YOR003W XRN1P22147 1528 aaKnown RBP18.93■□□□□ 0.62
YSP3YOR003W ECM5Q03214 1411 aa18.9■□□□□ 0.62
YSP3YOR003W RSE1Q04693 1361 aaKnown RBP18.84■□□□□ 0.61
YSP3YOR003W THO2P53552 1597 aaKnown RBP18.82■□□□□ 0.6
YSP3YOR003W BUD4P47136 1447 aa18.81■□□□□ 0.6
YSP3YOR003W REV3P14284 1504 aa18.61■□□□□ 0.57
YSP3YOR003W MDS3P53094 1487 aa18.59■□□□□ 0.57
YSP3YOR003W ATG2P53855 1592 aa18.47■□□□□ 0.55
YSP3YOR003W DRS1P32892 752 aaKnown RBP18.46■□□□□ 0.55
YSP3YOR003W PEP1P32319 1579 aa18.46■□□□□ 0.54
YSP3YOR003W TAF2P23255 1407 aa18.45■□□□□ 0.54
YSP3YOR003W SIN3P22579 1536 aa18.38■□□□□ 0.53
YSP3YOR003W SKI3P17883 1432 aaKnown RBP18.28■□□□□ 0.52
YSP3YOR003W SSK2P53599 1579 aa18.27■□□□□ 0.52
YSP3YOR003W MTC1P47018 478 aaKnown RBP18.22■□□□□ 0.51
YSP3YOR003W ESP1Q03018 1630 aa18.19■□□□□ 0.5
YSP3YOR003W BPT1P14772 1559 aa18.08■□□□□ 0.48
YSP3YOR003W MYO2P19524 1574 aaKnown RBP17.96■□□□□ 0.47
YSP3YOR003W YPK9Q12697 1472 aa17.89■□□□□ 0.45
YSP3YOR003W UFD4P33202 1483 aa17.88■□□□□ 0.45
YSP3YOR003W SCC2Q04002 1493 aa17.86■□□□□ 0.45
YSP3YOR003W YCF1P39109 1515 aaKnown RBP17.77■□□□□ 0.43
YSP3YOR003W RPO31P04051 1460 aa17.73■□□□□ 0.43
YSP3YOR003W TY2B-LR1P0C2J3 1770 aa17.66■□□□□ 0.42
YSP3YOR003W TY2B-FP0CX63 1770 aa17.66■□□□□ 0.42
YSP3YOR003W TY2B-GR2P0CX64 1770 aa17.66■□□□□ 0.42
YSP3YOR003W TY2B-CP25384 1770 aa17.66■□□□□ 0.42
YSP3YOR003W TY2B-DR2Q03494 1770 aa17.66■□□□□ 0.42
YSP3YOR003W TY1B-DR1Q03855 1755 aa17.66■□□□□ 0.42
YSP3YOR003W TY2B-DR3Q07791 1770 aaKnown RBP17.66■□□□□ 0.42
YSP3YOR003W TY2B-OR1Q12113 1770 aa17.66■□□□□ 0.42
YSP3YOR003W TY2B-DR1Q12472 1770 aa17.66■□□□□ 0.42
YSP3YOR003W TY2B-OR2Q12501 1770 aa17.66■□□□□ 0.42
YSP3YOR003W RQC2Q12532 1038 aaKnown RBP17.54■□□□□ 0.4
YSP3YOR003W RKR1Q04781 1562 aa17.54■□□□□ 0.4
YSP3YOR003W CDC25P04821 1589 aa17.53■□□□□ 0.4
YSP3YOR003W TY1B-BRQ12193 1756 aa17.51■□□□□ 0.39
YSP3YOR003W TY1B-GR3Q12316 1755 aa17.51■□□□□ 0.39
YSP3YOR003W TY1B-ORQ92393 1755 aa17.51■□□□□ 0.39
YSP3YOR003W POL1P13382 1468 aa17.51■□□□□ 0.39
YSP3YOR003W CHD1P32657 1468 aa17.49■□□□□ 0.39
YSP3YOR003W TOP2P06786 1428 aaKnown RBP17.49■□□□□ 0.39
YSP3YOR003W TY1B-DR3Q99231 1755 aa17.46■□□□□ 0.39
YSP3YOR003W TY2B-BQ12491 1770 aa17.46■□□□□ 0.38
YSP3YOR003W ESC1Q03661 1658 aaKnown RBP17.44■□□□□ 0.38
YSP3YOR003W STU1P38198 1513 aa17.44■□□□□ 0.38
YSP3YOR003W TY1B-HO13535 1793 aa17.39■□□□□ 0.37
YSP3YOR003W TY1B-DR5P0C2I2 1755 aa17.39■□□□□ 0.37
YSP3YOR003W TY1B-DR6P0C2I3 1755 aa17.39■□□□□ 0.37
YSP3YOR003W TY1B-LR2P0C2I5 1755 aa17.39■□□□□ 0.37
YSP3YOR003W TY1B-LR3P0C2I6 1755 aaKnown RBP17.39■□□□□ 0.37
YSP3YOR003W TY1B-PR1P0C2I9 1755 aaKnown RBP17.39■□□□□ 0.37
YSP3YOR003W TY1B-PR2P0C2J0 1756 aa17.39■□□□□ 0.37
YSP3YOR003W TY1B-PR3P0C2J1 1755 aaKnown RBP17.39■□□□□ 0.37
YSP3YOR003W TY1B-JR1P47098 1755 aa17.39■□□□□ 0.37
YSP3YOR003W TY1B-ML2Q03434 1755 aaKnown RBP17.39■□□□□ 0.37
YSP3YOR003W TY1B-ER1Q03612 1755 aa17.39■□□□□ 0.37
YSP3YOR003W TY1B-ML1Q04711 1755 aaKnown RBP17.39■□□□□ 0.37
YSP3YOR003W TY1B-GR2Q12269 1755 aa17.39■□□□□ 0.37
YSP3YOR003W TY1B-OLQ12273 1755 aa17.39■□□□□ 0.37
YSP3YOR003W TY1B-PLQ12414 1755 aaKnown RBP17.39■□□□□ 0.37
YSP3YOR003W DNF1P32660 1571 aa17.38■□□□□ 0.37
YSP3YOR003W PAN1P32521 1480 aa17.36■□□□□ 0.37
YSP3YOR003W YOR1P53049 1477 aa17.34■□□□□ 0.37
YSP3YOR003W MMS22Q06164 1454 aa17.3■□□□□ 0.36
YSP3YOR003W SMC4Q12267 1418 aa17.28■□□□□ 0.36
YSP3YOR003W RPA190P10964 1664 aaKnown RBP17.25■□□□□ 0.35
YSP3YOR003W SPP41P38904 1435 aa17.16■□□□□ 0.34
YSP3YOR003W MET5P47169 1442 aa17.15■□□□□ 0.34
YSP3YOR003W TRM732Q03496 1420 aa17.12■□□□□ 0.33
YSP3YOR003W TY1B-JR2P47100 1755 aaKnown RBP17.06■□□□□ 0.32
YSP3YOR003W TY1B-ER2Q03619 1755 aa17.06■□□□□ 0.32
YSP3YOR003W TY1B-MR1Q04214 1755 aa17.06■□□□□ 0.32
YSP3YOR003W TY1B-MR2Q04670 1755 aaKnown RBP17.06■□□□□ 0.32
YSP3YOR003W TY1B-LR1Q12088 1755 aaKnown RBP17.06■□□□□ 0.32
YSP3YOR003W TY1B-NL1Q12112 1755 aa17.06■□□□□ 0.32
YSP3YOR003W TY1B-GR1Q12141 1755 aa17.06■□□□□ 0.32
YSP3YOR003W TY1B-BLQ12490 1755 aa17.06■□□□□ 0.32
YSP3YOR003W YTA7P40340 1379 aa17.04■□□□□ 0.32
YSP3YOR003W VTH1P40438 1549 aa17.03■□□□□ 0.32
YSP3YOR003W VTH2P40890 1549 aa17.03■□□□□ 0.32
YSP3YOR003W TSC11P40061 1430 aa17.01■□□□□ 0.31
YSP3YOR003W MYO4P32492 1471 aa16.98■□□□□ 0.31
YSP3YOR003W NTE1Q04958 1679 aa16.97■□□□□ 0.31
YSP3YOR003W NUP159P40477 1460 aa16.95■□□□□ 0.3
YSP3YOR003W YRF1-1P0CX20 1796 aa16.93■□□□□ 0.3
YSP3YOR003W YRF1-5P0CX21 1796 aa16.93■□□□□ 0.3
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms