RNA–Protein interactions for RNA: YNR015W

SMM1, Transcript of Dihydrouridine synthase, yeastyeast

Gene SMM1, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMM1YNR015W MON2P48563 1636 aaPredicted RBP18.09■□□□□ 0.49
SMM1YNR015W INO80P53115 1489 aa18.07■□□□□ 0.48
SMM1YNR015W SGS1P35187 1447 aa17.79■□□□□ 0.44
SMM1YNR015W TCB3Q03640 1545 aaKnown RBP17.64■□□□□ 0.41
SMM1YNR015W TY1B-DR4Q07793 1604 aa17.51■□□□□ 0.39
SMM1YNR015W SWR1Q05471 1514 aa17.43■□□□□ 0.38
SMM1YNR015W DNA2P38859 1522 aa17.24■□□□□ 0.35
SMM1YNR015W KOG1P38873 1557 aa17.03■□□□□ 0.32
SMM1YNR015W HSL1P34244 1518 aa17.01■□□□□ 0.31
SMM1YNR015W SPT6P23615 1451 aaKnown RBP16.99■□□□□ 0.31
SMM1YNR015W SPA2P23201 1466 aaKnown RBP16.83■□□□□ 0.28
SMM1YNR015W HIR3P47171 1648 aa16.68■□□□□ 0.26
SMM1YNR015W SSN2P38931 1420 aa16.62■□□□□ 0.25
SMM1YNR015W XRN1P22147 1528 aaKnown RBP16.46■□□□□ 0.23
SMM1YNR015W ECM5Q03214 1411 aa16.45■□□□□ 0.22
SMM1YNR015W BUD4P47136 1447 aa16.36■□□□□ 0.21
SMM1YNR015W THO2P53552 1597 aaKnown RBP16.35■□□□□ 0.21
SMM1YNR015W RSE1Q04693 1361 aaKnown RBP16.29■□□□□ 0.2
SMM1YNR015W REV3P14284 1504 aa16.18■□□□□ 0.18
SMM1YNR015W MDS3P53094 1487 aa16.12■□□□□ 0.17
SMM1YNR015W DRS1P32892 752 aaKnown RBP16.11■□□□□ 0.17
SMM1YNR015W MTC1P47018 478 aaKnown RBP16.08■□□□□ 0.16
SMM1YNR015W PEP1P32319 1579 aa16.06■□□□□ 0.16
SMM1YNR015W ATG2P53855 1592 aa16.04■□□□□ 0.16
SMM1YNR015W SIN3P22579 1536 aa16.02■□□□□ 0.15
SMM1YNR015W TAF2P23255 1407 aa16■□□□□ 0.15
SMM1YNR015W SSK2P53599 1579 aa15.89■□□□□ 0.13
SMM1YNR015W SKI3P17883 1432 aaKnown RBP15.86■□□□□ 0.13
SMM1YNR015W ESP1Q03018 1630 aa15.81■□□□□ 0.12
SMM1YNR015W BPT1P14772 1559 aa15.67■□□□□ 0.1
SMM1YNR015W MYO2P19524 1574 aaKnown RBP15.62■□□□□ 0.09
SMM1YNR015W YPK9Q12697 1472 aa15.61■□□□□ 0.09
SMM1YNR015W UFD4P33202 1483 aa15.55■□□□□ 0.08
SMM1YNR015W SCC2Q04002 1493 aa15.55■□□□□ 0.08
SMM1YNR015W RPO31P04051 1460 aa15.48■□□□□ 0.07
SMM1YNR015W YCF1P39109 1515 aaKnown RBP15.41■□□□□ 0.06
SMM1YNR015W TY2B-LR1P0C2J3 1770 aa15.31■□□□□ 0.04
SMM1YNR015W TY2B-FP0CX63 1770 aa15.31■□□□□ 0.04
SMM1YNR015W TY2B-GR2P0CX64 1770 aa15.31■□□□□ 0.04
SMM1YNR015W TY2B-CP25384 1770 aa15.31■□□□□ 0.04
SMM1YNR015W TY2B-DR2Q03494 1770 aa15.31■□□□□ 0.04
SMM1YNR015W TY1B-DR1Q03855 1755 aa15.31■□□□□ 0.04
SMM1YNR015W TY2B-DR3Q07791 1770 aaKnown RBP15.31■□□□□ 0.04
SMM1YNR015W TY2B-OR1Q12113 1770 aa15.31■□□□□ 0.04
SMM1YNR015W TY2B-DR1Q12472 1770 aa15.31■□□□□ 0.04
SMM1YNR015W TY2B-OR2Q12501 1770 aa15.31■□□□□ 0.04
SMM1YNR015W POL1P13382 1468 aa15.29■□□□□ 0.04
SMM1YNR015W TOP2P06786 1428 aaKnown RBP15.28■□□□□ 0.04
SMM1YNR015W CHD1P32657 1468 aa15.24■□□□□ 0.03
SMM1YNR015W RKR1Q04781 1562 aa15.24■□□□□ 0.03
SMM1YNR015W CDC25P04821 1589 aa15.21■□□□□ 0.03
SMM1YNR015W TY1B-BRQ12193 1756 aa15.19■□□□□ 0.02
SMM1YNR015W TY1B-GR3Q12316 1755 aa15.19■□□□□ 0.02
SMM1YNR015W TY1B-ORQ92393 1755 aa15.19■□□□□ 0.02
SMM1YNR015W STU1P38198 1513 aa15.18■□□□□ 0.02
SMM1YNR015W RQC2Q12532 1038 aaKnown RBP15.17■□□□□ 0.02
SMM1YNR015W TY1B-DR3Q99231 1755 aa15.15■□□□□ 0.02
SMM1YNR015W TY2B-BQ12491 1770 aa15.14■□□□□ 0.01
SMM1YNR015W YOR1P53049 1477 aa15.13■□□□□ 0.01
SMM1YNR015W PAN1P32521 1480 aa15.12■□□□□ 0.01
SMM1YNR015W SMC4Q12267 1418 aa15.1■□□□□ 0.01
SMM1YNR015W DNF1P32660 1571 aa15.1■□□□□ 0.01
SMM1YNR015W TY1B-HO13535 1793 aa15.09■□□□□ 0.01
SMM1YNR015W TY1B-DR5P0C2I2 1755 aa15.09■□□□□ 0.01
SMM1YNR015W TY1B-DR6P0C2I3 1755 aa15.09■□□□□ 0.01
SMM1YNR015W TY1B-LR2P0C2I5 1755 aa15.09■□□□□ 0.01
SMM1YNR015W TY1B-LR3P0C2I6 1755 aaKnown RBP15.09■□□□□ 0.01
SMM1YNR015W TY1B-PR1P0C2I9 1755 aaKnown RBP15.09■□□□□ 0.01
SMM1YNR015W TY1B-PR2P0C2J0 1756 aa15.09■□□□□ 0.01
SMM1YNR015W TY1B-PR3P0C2J1 1755 aaKnown RBP15.09■□□□□ 0.01
SMM1YNR015W TY1B-JR1P47098 1755 aa15.09■□□□□ 0.01
SMM1YNR015W TY1B-ML2Q03434 1755 aaKnown RBP15.09■□□□□ 0.01
SMM1YNR015W TY1B-ER1Q03612 1755 aa15.09■□□□□ 0.01
SMM1YNR015W TY1B-ML1Q04711 1755 aaKnown RBP15.09■□□□□ 0.01
SMM1YNR015W TY1B-GR2Q12269 1755 aa15.09■□□□□ 0.01
SMM1YNR015W TY1B-OLQ12273 1755 aa15.09■□□□□ 0.01
SMM1YNR015W TY1B-PLQ12414 1755 aaKnown RBP15.09■□□□□ 0.01
SMM1YNR015W MMS22Q06164 1454 aa15.06■□□□□ 0
SMM1YNR015W ESC1Q03661 1658 aaKnown RBP15.05■□□□□ -0
SMM1YNR015W RPA190P10964 1664 aaKnown RBP14.97□□□□□ -0.01
SMM1YNR015W MET5P47169 1442 aa14.96□□□□□ -0.01
SMM1YNR015W SPP41P38904 1435 aa14.95□□□□□ -0.02
SMM1YNR015W YTA7P40340 1379 aa14.95□□□□□ -0.02
SMM1YNR015W TRM732Q03496 1420 aa14.89□□□□□ -0.03
SMM1YNR015W TSC11P40061 1430 aa14.85□□□□□ -0.03
SMM1YNR015W MYO4P32492 1471 aa14.84□□□□□ -0.03
SMM1YNR015W TY1B-JR2P47100 1755 aaKnown RBP14.82□□□□□ -0.04
SMM1YNR015W TY1B-ER2Q03619 1755 aa14.82□□□□□ -0.04
SMM1YNR015W TY1B-MR1Q04214 1755 aa14.82□□□□□ -0.04
SMM1YNR015W TY1B-MR2Q04670 1755 aaKnown RBP14.82□□□□□ -0.04
SMM1YNR015W TY1B-LR1Q12088 1755 aaKnown RBP14.82□□□□□ -0.04
SMM1YNR015W TY1B-NL1Q12112 1755 aa14.82□□□□□ -0.04
SMM1YNR015W TY1B-GR1Q12141 1755 aa14.82□□□□□ -0.04
SMM1YNR015W TY1B-BLQ12490 1755 aa14.82□□□□□ -0.04
SMM1YNR015W VTH1P40438 1549 aa14.81□□□□□ -0.04
SMM1YNR015W VTH2P40890 1549 aa14.81□□□□□ -0.04
SMM1YNR015W NUP159P40477 1460 aa14.73□□□□□ -0.05
SMM1YNR015W LTE1P07866 1435 aa14.69□□□□□ -0.06
SMM1YNR015W NTE1Q04958 1679 aa14.68□□□□□ -0.06
SMM1YNR015W YRF1-1P0CX20 1796 aa14.68□□□□□ -0.06
Retrieved 100 of 5,963 RNA–protein pairs in 56 ms