RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W SGS1P35187 1447 aa15.05■□□□□ -0
YPT11YNL304W INO80P53115 1489 aa14.9□□□□□ -0.02
YPT11YNL304W MON2P48563 1636 aaPredicted RBP14.85□□□□□ -0.03
YPT11YNL304W TCB3Q03640 1545 aaKnown RBP14.82□□□□□ -0.04
YPT11YNL304W TY1B-DR4Q07793 1604 aa14.61□□□□□ -0.07
YPT11YNL304W SWR1Q05471 1514 aa14.44□□□□□ -0.1
YPT11YNL304W SPT6P23615 1451 aaKnown RBP14.28□□□□□ -0.12
YPT11YNL304W HSL1P34244 1518 aa14.28□□□□□ -0.12
YPT11YNL304W SPA2P23201 1466 aaKnown RBP14.27□□□□□ -0.12
YPT11YNL304W SSN2P38931 1420 aa14.2□□□□□ -0.14
YPT11YNL304W DNA2P38859 1522 aa14.15□□□□□ -0.14
YPT11YNL304W KOG1P38873 1557 aa14.13□□□□□ -0.15
YPT11YNL304W HIR3P47171 1648 aa14.02□□□□□ -0.16
YPT11YNL304W XRN1P22147 1528 aaKnown RBP13.9□□□□□ -0.19
YPT11YNL304W DRS1P32892 752 aaKnown RBP13.87□□□□□ -0.19
YPT11YNL304W THO2P53552 1597 aaKnown RBP13.71□□□□□ -0.21
YPT11YNL304W BUD4P47136 1447 aa13.69□□□□□ -0.22
YPT11YNL304W REV3P14284 1504 aa13.68□□□□□ -0.22
YPT11YNL304W ECM5Q03214 1411 aa13.66□□□□□ -0.22
YPT11YNL304W SIN3P22579 1536 aa13.56□□□□□ -0.24
YPT11YNL304W TAF2P23255 1407 aa13.52□□□□□ -0.25
YPT11YNL304W SSK2P53599 1579 aa13.46□□□□□ -0.25
YPT11YNL304W MDS3P53094 1487 aa13.46□□□□□ -0.25
YPT11YNL304W ATG2P53855 1592 aa13.44□□□□□ -0.26
YPT11YNL304W SKI3P17883 1432 aaKnown RBP13.4□□□□□ -0.26
YPT11YNL304W ESP1Q03018 1630 aa13.39□□□□□ -0.27
YPT11YNL304W MYO2P19524 1574 aaKnown RBP13.36□□□□□ -0.27
YPT11YNL304W PEP1P32319 1579 aa13.36□□□□□ -0.27
YPT11YNL304W RSE1Q04693 1361 aaKnown RBP13.33□□□□□ -0.27
YPT11YNL304W YPK9Q12697 1472 aa13.2□□□□□ -0.3
YPT11YNL304W SCC2Q04002 1493 aa13.1□□□□□ -0.31
YPT11YNL304W BPT1P14772 1559 aa13.09□□□□□ -0.31
YPT11YNL304W UFD4P33202 1483 aa13.07□□□□□ -0.32
YPT11YNL304W MTC1P47018 478 aaKnown RBP13.06□□□□□ -0.32
YPT11YNL304W RPO31P04051 1460 aa13.02□□□□□ -0.33
YPT11YNL304W POL1P13382 1468 aa13.02□□□□□ -0.33
YPT11YNL304W RKR1Q04781 1562 aa12.97□□□□□ -0.33
YPT11YNL304W STU1P38198 1513 aa12.96□□□□□ -0.33
YPT11YNL304W TOP2P06786 1428 aaKnown RBP12.93□□□□□ -0.34
YPT11YNL304W YCF1P39109 1515 aaKnown RBP12.91□□□□□ -0.34
YPT11YNL304W TY2B-LR1P0C2J3 1770 aa12.88□□□□□ -0.35
YPT11YNL304W TY2B-FP0CX63 1770 aa12.88□□□□□ -0.35
YPT11YNL304W TY2B-GR2P0CX64 1770 aa12.88□□□□□ -0.35
YPT11YNL304W TY2B-CP25384 1770 aa12.88□□□□□ -0.35
YPT11YNL304W TY2B-DR2Q03494 1770 aa12.88□□□□□ -0.35
YPT11YNL304W TY1B-DR1Q03855 1755 aa12.88□□□□□ -0.35
YPT11YNL304W TY2B-DR3Q07791 1770 aaKnown RBP12.88□□□□□ -0.35
YPT11YNL304W TY2B-OR1Q12113 1770 aa12.88□□□□□ -0.35
YPT11YNL304W TY2B-DR1Q12472 1770 aa12.88□□□□□ -0.35
YPT11YNL304W TY2B-OR2Q12501 1770 aa12.88□□□□□ -0.35
YPT11YNL304W YOR1P53049 1477 aa12.87□□□□□ -0.35
YPT11YNL304W RQC2Q12532 1038 aaKnown RBP12.87□□□□□ -0.35
YPT11YNL304W YTA7P40340 1379 aa12.85□□□□□ -0.35
YPT11YNL304W SMC4Q12267 1418 aa12.83□□□□□ -0.36
YPT11YNL304W CDC25P04821 1589 aa12.77□□□□□ -0.36
YPT11YNL304W TY1B-DR3Q99231 1755 aa12.76□□□□□ -0.37
YPT11YNL304W CHD1P32657 1468 aa12.76□□□□□ -0.37
YPT11YNL304W TY2B-BQ12491 1770 aa12.75□□□□□ -0.37
YPT11YNL304W MYO4P32492 1471 aa12.73□□□□□ -0.37
YPT11YNL304W TY1B-BRQ12193 1756 aa12.73□□□□□ -0.37
YPT11YNL304W TY1B-GR3Q12316 1755 aa12.73□□□□□ -0.37
YPT11YNL304W TY1B-ORQ92393 1755 aa12.73□□□□□ -0.37
YPT11YNL304W MMS22Q06164 1454 aa12.72□□□□□ -0.37
YPT11YNL304W PAN1P32521 1480 aa12.69□□□□□ -0.38
YPT11YNL304W ESC1Q03661 1658 aaKnown RBP12.69□□□□□ -0.38
YPT11YNL304W TY1B-HO13535 1793 aa12.69□□□□□ -0.38
YPT11YNL304W TY1B-DR5P0C2I2 1755 aa12.69□□□□□ -0.38
YPT11YNL304W TY1B-DR6P0C2I3 1755 aa12.69□□□□□ -0.38
YPT11YNL304W TY1B-LR2P0C2I5 1755 aa12.69□□□□□ -0.38
YPT11YNL304W TY1B-LR3P0C2I6 1755 aaKnown RBP12.69□□□□□ -0.38
YPT11YNL304W TY1B-PR1P0C2I9 1755 aaKnown RBP12.69□□□□□ -0.38
YPT11YNL304W TY1B-PR2P0C2J0 1756 aa12.69□□□□□ -0.38
YPT11YNL304W TY1B-PR3P0C2J1 1755 aaKnown RBP12.69□□□□□ -0.38
YPT11YNL304W TY1B-JR1P47098 1755 aa12.69□□□□□ -0.38
YPT11YNL304W TY1B-ML2Q03434 1755 aaKnown RBP12.69□□□□□ -0.38
YPT11YNL304W TY1B-ER1Q03612 1755 aa12.69□□□□□ -0.38
YPT11YNL304W TY1B-ML1Q04711 1755 aaKnown RBP12.69□□□□□ -0.38
YPT11YNL304W TY1B-GR2Q12269 1755 aa12.69□□□□□ -0.38
YPT11YNL304W TY1B-OLQ12273 1755 aa12.69□□□□□ -0.38
YPT11YNL304W TY1B-PLQ12414 1755 aaKnown RBP12.69□□□□□ -0.38
YPT11YNL304W SPP41P38904 1435 aa12.66□□□□□ -0.38
YPT11YNL304W SAS10Q12136 610 aaPredicted RBP12.61□□□□□ -0.39
YPT11YNL304W TRM732Q03496 1420 aa12.59□□□□□ -0.39
YPT11YNL304W TSC11P40061 1430 aa12.56□□□□□ -0.4
YPT11YNL304W TAF7Q05021 590 aa12.56□□□□□ -0.4
YPT11YNL304W VTH1P40438 1549 aa12.55□□□□□ -0.4
YPT11YNL304W VTH2P40890 1549 aa12.55□□□□□ -0.4
YPT11YNL304W DNF1P32660 1571 aa12.54□□□□□ -0.4
YPT11YNL304W RPA190P10964 1664 aaKnown RBP12.53□□□□□ -0.4
YPT11YNL304W STH1P32597 1359 aa12.53□□□□□ -0.4
YPT11YNL304W SNQ2P32568 1501 aaKnown RBP12.51□□□□□ -0.41
YPT11YNL304W MLP2P40457 1679 aa12.47□□□□□ -0.41
YPT11YNL304W MET5P47169 1442 aa12.46□□□□□ -0.41
YPT11YNL304W TY1B-JR2P47100 1755 aaKnown RBP12.46□□□□□ -0.41
YPT11YNL304W TY1B-ER2Q03619 1755 aa12.46□□□□□ -0.41
YPT11YNL304W TY1B-MR1Q04214 1755 aa12.46□□□□□ -0.41
YPT11YNL304W TY1B-MR2Q04670 1755 aaKnown RBP12.46□□□□□ -0.41
YPT11YNL304W TY1B-LR1Q12088 1755 aaKnown RBP12.46□□□□□ -0.41
YPT11YNL304W TY1B-NL1Q12112 1755 aa12.46□□□□□ -0.41
YPT11YNL304W TY1B-GR1Q12141 1755 aa12.46□□□□□ -0.41
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms