RNA–Protein interactions for RNA: YNL292W

PUS4, Transcript of Pseudouridine synthase, yeastyeast

Gene PUS4, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUS4YNL292W MON2P48563 1636 aaPredicted RBP15.36■□□□□ 0.05
PUS4YNL292W INO80P53115 1489 aa15.33■□□□□ 0.04
PUS4YNL292W DNA2P38859 1522 aa14.64□□□□□ -0.07
PUS4YNL292W SWR1Q05471 1514 aa14.56□□□□□ -0.08
PUS4YNL292W TY1B-DR4Q07793 1604 aa14.37□□□□□ -0.11
PUS4YNL292W KOG1P38873 1557 aa14.36□□□□□ -0.11
PUS4YNL292W TCB3Q03640 1545 aaKnown RBP14.32□□□□□ -0.12
PUS4YNL292W RSE1Q04693 1361 aaKnown RBP14.15□□□□□ -0.14
PUS4YNL292W SGS1P35187 1447 aa14.01□□□□□ -0.17
PUS4YNL292W HSL1P34244 1518 aa13.83□□□□□ -0.2
PUS4YNL292W SPT6P23615 1451 aaKnown RBP13.8□□□□□ -0.2
PUS4YNL292W SPA2P23201 1466 aaKnown RBP13.65□□□□□ -0.22
PUS4YNL292W ECM5Q03214 1411 aa13.58□□□□□ -0.24
PUS4YNL292W HIR3P47171 1648 aa13.53□□□□□ -0.24
PUS4YNL292W MTC1P47018 478 aaKnown RBP13.43□□□□□ -0.26
PUS4YNL292W BUD4P47136 1447 aa13.43□□□□□ -0.26
PUS4YNL292W THO2P53552 1597 aaKnown RBP13.43□□□□□ -0.26
PUS4YNL292W MDS3P53094 1487 aa13.35□□□□□ -0.27
PUS4YNL292W XRN1P22147 1528 aaKnown RBP13.23□□□□□ -0.29
PUS4YNL292W PEP1P32319 1579 aa13.2□□□□□ -0.3
PUS4YNL292W REV3P14284 1504 aa13.11□□□□□ -0.31
PUS4YNL292W ATG2P53855 1592 aa13.09□□□□□ -0.31
PUS4YNL292W BPT1P14772 1559 aa13.02□□□□□ -0.33
PUS4YNL292W DRS1P32892 752 aaKnown RBP12.97□□□□□ -0.33
PUS4YNL292W TAF2P23255 1407 aa12.88□□□□□ -0.35
PUS4YNL292W SKI3P17883 1432 aaKnown RBP12.85□□□□□ -0.35
PUS4YNL292W SSN2P38931 1420 aa12.81□□□□□ -0.36
PUS4YNL292W SIN3P22579 1536 aa12.78□□□□□ -0.36
PUS4YNL292W YCF1P39109 1515 aaKnown RBP12.78□□□□□ -0.36
PUS4YNL292W SSK2P53599 1579 aa12.77□□□□□ -0.36
PUS4YNL292W ESP1Q03018 1630 aa12.68□□□□□ -0.38
PUS4YNL292W UFD4P33202 1483 aa12.61□□□□□ -0.39
PUS4YNL292W SCC2Q04002 1493 aa12.5□□□□□ -0.41
PUS4YNL292W ESC1Q03661 1658 aaKnown RBP12.48□□□□□ -0.41
PUS4YNL292W CDC25P04821 1589 aa12.46□□□□□ -0.42
PUS4YNL292W YPK9Q12697 1472 aa12.46□□□□□ -0.42
PUS4YNL292W TY2B-LR1P0C2J3 1770 aa12.45□□□□□ -0.42
PUS4YNL292W TY2B-FP0CX63 1770 aa12.45□□□□□ -0.42
PUS4YNL292W TY2B-GR2P0CX64 1770 aa12.45□□□□□ -0.42
PUS4YNL292W TY2B-CP25384 1770 aa12.45□□□□□ -0.42
PUS4YNL292W TY2B-DR2Q03494 1770 aa12.45□□□□□ -0.42
PUS4YNL292W TY1B-DR1Q03855 1755 aa12.45□□□□□ -0.42
PUS4YNL292W TY2B-DR3Q07791 1770 aaKnown RBP12.45□□□□□ -0.42
PUS4YNL292W TY2B-OR1Q12113 1770 aa12.45□□□□□ -0.42
PUS4YNL292W TY2B-DR1Q12472 1770 aa12.45□□□□□ -0.42
PUS4YNL292W TY2B-OR2Q12501 1770 aa12.45□□□□□ -0.42
PUS4YNL292W DNF1P32660 1571 aa12.44□□□□□ -0.42
PUS4YNL292W MYO2P19524 1574 aaKnown RBP12.43□□□□□ -0.42
PUS4YNL292W TY1B-BRQ12193 1756 aa12.42□□□□□ -0.42
PUS4YNL292W TY1B-GR3Q12316 1755 aa12.42□□□□□ -0.42
PUS4YNL292W TY1B-ORQ92393 1755 aa12.42□□□□□ -0.42
PUS4YNL292W CHD1P32657 1468 aa12.41□□□□□ -0.42
PUS4YNL292W RPO31P04051 1460 aa12.4□□□□□ -0.43
PUS4YNL292W MET5P47169 1442 aa12.37□□□□□ -0.43
PUS4YNL292W MIF2P35201 549 aa12.37□□□□□ -0.43
PUS4YNL292W RQC2Q12532 1038 aaKnown RBP12.37□□□□□ -0.43
PUS4YNL292W RKR1Q04781 1562 aa12.3□□□□□ -0.44
PUS4YNL292W RPA190P10964 1664 aaKnown RBP12.3□□□□□ -0.44
PUS4YNL292W BNI1P41832 1953 aa12.29□□□□□ -0.44
PUS4YNL292W LTE1P07866 1435 aa12.28□□□□□ -0.44
PUS4YNL292W PAN1P32521 1480 aa12.28□□□□□ -0.44
PUS4YNL292W TY2B-BQ12491 1770 aa12.28□□□□□ -0.44
PUS4YNL292W TY1B-HO13535 1793 aa12.27□□□□□ -0.45
PUS4YNL292W TY1B-DR5P0C2I2 1755 aa12.27□□□□□ -0.45
PUS4YNL292W TY1B-DR6P0C2I3 1755 aa12.27□□□□□ -0.45
PUS4YNL292W TY1B-LR2P0C2I5 1755 aa12.27□□□□□ -0.45
PUS4YNL292W TY1B-LR3P0C2I6 1755 aaKnown RBP12.27□□□□□ -0.45
PUS4YNL292W TY1B-PR1P0C2I9 1755 aaKnown RBP12.27□□□□□ -0.45
PUS4YNL292W TY1B-PR2P0C2J0 1756 aa12.27□□□□□ -0.45
PUS4YNL292W TY1B-PR3P0C2J1 1755 aaKnown RBP12.27□□□□□ -0.45
PUS4YNL292W TY1B-JR1P47098 1755 aa12.27□□□□□ -0.45
PUS4YNL292W TY1B-ML2Q03434 1755 aaKnown RBP12.27□□□□□ -0.45
PUS4YNL292W TY1B-ER1Q03612 1755 aa12.27□□□□□ -0.45
PUS4YNL292W TY1B-ML1Q04711 1755 aaKnown RBP12.27□□□□□ -0.45
PUS4YNL292W TY1B-GR2Q12269 1755 aa12.27□□□□□ -0.45
PUS4YNL292W TY1B-OLQ12273 1755 aa12.27□□□□□ -0.45
PUS4YNL292W TY1B-PLQ12414 1755 aaKnown RBP12.27□□□□□ -0.45
PUS4YNL292W TY1B-DR3Q99231 1755 aa12.24□□□□□ -0.45
PUS4YNL292W ITT1Q04638 464 aa12.16□□□□□ -0.46
PUS4YNL292W TOP2P06786 1428 aaKnown RBP12.16□□□□□ -0.46
PUS4YNL292W GEA2P39993 1459 aaKnown RBP12.14□□□□□ -0.47
PUS4YNL292W MMS22Q06164 1454 aa12.13□□□□□ -0.47
PUS4YNL292W YRF1-1P0CX20 1796 aa12.1□□□□□ -0.47
PUS4YNL292W YRF1-5P0CX21 1796 aa12.1□□□□□ -0.47
PUS4YNL292W YRF1-8P0CX22 1796 aa12.1□□□□□ -0.47
PUS4YNL292W TRM732Q03496 1420 aa12.07□□□□□ -0.48
PUS4YNL292W ABP1P15891 592 aaKnown RBP12.06□□□□□ -0.48
PUS4YNL292W MMS1Q06211 1407 aa12.03□□□□□ -0.48
PUS4YNL292W TY1B-JR2P47100 1755 aaKnown RBP12.01□□□□□ -0.49
PUS4YNL292W TY1B-ER2Q03619 1755 aa12.01□□□□□ -0.49
PUS4YNL292W TY1B-MR1Q04214 1755 aa12.01□□□□□ -0.49
PUS4YNL292W TY1B-MR2Q04670 1755 aaKnown RBP12.01□□□□□ -0.49
PUS4YNL292W TY1B-LR1Q12088 1755 aaKnown RBP12.01□□□□□ -0.49
PUS4YNL292W TY1B-NL1Q12112 1755 aa12.01□□□□□ -0.49
PUS4YNL292W TY1B-GR1Q12141 1755 aa12.01□□□□□ -0.49
PUS4YNL292W TY1B-BLQ12490 1755 aa12.01□□□□□ -0.49
PUS4YNL292W POL1P13382 1468 aa11.99□□□□□ -0.49
PUS4YNL292W NUP159P40477 1460 aa11.99□□□□□ -0.49
PUS4YNL292W YFR006WP43590 535 aa11.98□□□□□ -0.49
PUS4YNL292W VPS15P22219 1454 aa11.96□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms