RNA–Protein interactions for RNA: YNL187W

SWT21, Transcript of Protein involved in mRNA splicing, yeastyeast

Gene SWT21, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT21YNL187W SGS1P35187 1447 aa15.48■□□□□ 0.07
SWT21YNL187W INO80P53115 1489 aa15.2■□□□□ 0.02
SWT21YNL187W TCB3Q03640 1545 aaKnown RBP15.1■□□□□ 0.01
SWT21YNL187W MON2P48563 1636 aaPredicted RBP15.06■□□□□ 0
SWT21YNL187W TY1B-DR4Q07793 1604 aa14.98□□□□□ -0.01
SWT21YNL187W SWR1Q05471 1514 aa14.73□□□□□ -0.05
SWT21YNL187W SSN2P38931 1420 aa14.73□□□□□ -0.05
SWT21YNL187W SPA2P23201 1466 aaKnown RBP14.69□□□□□ -0.06
SWT21YNL187W HSL1P34244 1518 aa14.68□□□□□ -0.06
SWT21YNL187W SPT6P23615 1451 aaKnown RBP14.62□□□□□ -0.07
SWT21YNL187W HIR3P47171 1648 aa14.41□□□□□ -0.1
SWT21YNL187W DNA2P38859 1522 aa14.36□□□□□ -0.11
SWT21YNL187W MTC1P47018 478 aaKnown RBP14.34□□□□□ -0.11
SWT21YNL187W XRN1P22147 1528 aaKnown RBP14.27□□□□□ -0.12
SWT21YNL187W KOG1P38873 1557 aa14.26□□□□□ -0.13
SWT21YNL187W DRS1P32892 752 aaKnown RBP14.23□□□□□ -0.13
SWT21YNL187W REV3P14284 1504 aa14.08□□□□□ -0.16
SWT21YNL187W THO2P53552 1597 aaKnown RBP13.96□□□□□ -0.18
SWT21YNL187W SIN3P22579 1536 aa13.95□□□□□ -0.18
SWT21YNL187W BUD4P47136 1447 aa13.93□□□□□ -0.18
SWT21YNL187W TAF2P23255 1407 aa13.92□□□□□ -0.18
SWT21YNL187W ECM5Q03214 1411 aa13.9□□□□□ -0.18
SWT21YNL187W SSK2P53599 1579 aa13.88□□□□□ -0.19
SWT21YNL187W ATG2P53855 1592 aa13.79□□□□□ -0.2
SWT21YNL187W ESP1Q03018 1630 aa13.76□□□□□ -0.21
SWT21YNL187W FAP1P53971 965 aa13.74□□□□□ -0.21
SWT21YNL187W MDS3P53094 1487 aa13.74□□□□□ -0.21
SWT21YNL187W SKI3P17883 1432 aaKnown RBP13.71□□□□□ -0.22
SWT21YNL187W PEP1P32319 1579 aa13.69□□□□□ -0.22
SWT21YNL187W MYO2P19524 1574 aaKnown RBP13.68□□□□□ -0.22
SWT21YNL187W YPK9Q12697 1472 aa13.52□□□□□ -0.25
SWT21YNL187W SCC2Q04002 1493 aa13.46□□□□□ -0.25
SWT21YNL187W POL1P13382 1468 aa13.41□□□□□ -0.26
SWT21YNL187W STU1P38198 1513 aa13.39□□□□□ -0.27
SWT21YNL187W UFD4P33202 1483 aa13.37□□□□□ -0.27
SWT21YNL187W RPO31P04051 1460 aa13.36□□□□□ -0.27
SWT21YNL187W RKR1Q04781 1562 aa13.35□□□□□ -0.27
SWT21YNL187W RSE1Q04693 1361 aaKnown RBP13.32□□□□□ -0.28
SWT21YNL187W BPT1P14772 1559 aa13.3□□□□□ -0.28
SWT21YNL187W TY2B-LR1P0C2J3 1770 aa13.27□□□□□ -0.28
SWT21YNL187W TY2B-FP0CX63 1770 aa13.27□□□□□ -0.28
SWT21YNL187W TY2B-GR2P0CX64 1770 aa13.27□□□□□ -0.28
SWT21YNL187W TY2B-CP25384 1770 aa13.27□□□□□ -0.28
SWT21YNL187W TY2B-DR2Q03494 1770 aa13.27□□□□□ -0.28
SWT21YNL187W TY1B-DR1Q03855 1755 aa13.27□□□□□ -0.28
SWT21YNL187W TY2B-DR3Q07791 1770 aaKnown RBP13.27□□□□□ -0.28
SWT21YNL187W TY2B-OR1Q12113 1770 aa13.27□□□□□ -0.28
SWT21YNL187W TY2B-DR1Q12472 1770 aa13.27□□□□□ -0.28
SWT21YNL187W TY2B-OR2Q12501 1770 aa13.27□□□□□ -0.28
SWT21YNL187W YCF1P39109 1515 aaKnown RBP13.27□□□□□ -0.29
SWT21YNL187W YOR1P53049 1477 aa13.24□□□□□ -0.29
SWT21YNL187W TOP2P06786 1428 aaKnown RBP13.23□□□□□ -0.29
SWT21YNL187W TY1B-DR3Q99231 1755 aa13.18□□□□□ -0.3
SWT21YNL187W SMC4Q12267 1418 aa13.15□□□□□ -0.3
SWT21YNL187W YTA7P40340 1379 aa13.15□□□□□ -0.3
SWT21YNL187W TY2B-BQ12491 1770 aa13.15□□□□□ -0.31
SWT21YNL187W MMS22Q06164 1454 aa13.14□□□□□ -0.31
SWT21YNL187W CHD1P32657 1468 aa13.12□□□□□ -0.31
SWT21YNL187W TY1B-BRQ12193 1756 aa13.09□□□□□ -0.31
SWT21YNL187W TY1B-GR3Q12316 1755 aa13.09□□□□□ -0.31
SWT21YNL187W TY1B-ORQ92393 1755 aa13.09□□□□□ -0.31
SWT21YNL187W RQC2Q12532 1038 aaKnown RBP13.08□□□□□ -0.32
SWT21YNL187W MYO4P32492 1471 aa13.08□□□□□ -0.32
SWT21YNL187W TY1B-HO13535 1793 aa13.05□□□□□ -0.32
SWT21YNL187W TY1B-DR5P0C2I2 1755 aa13.05□□□□□ -0.32
SWT21YNL187W TY1B-DR6P0C2I3 1755 aa13.05□□□□□ -0.32
SWT21YNL187W TY1B-LR2P0C2I5 1755 aa13.05□□□□□ -0.32
SWT21YNL187W TY1B-LR3P0C2I6 1755 aaKnown RBP13.05□□□□□ -0.32
SWT21YNL187W TY1B-PR1P0C2I9 1755 aaKnown RBP13.05□□□□□ -0.32
SWT21YNL187W TY1B-PR2P0C2J0 1756 aa13.05□□□□□ -0.32
SWT21YNL187W TY1B-PR3P0C2J1 1755 aaKnown RBP13.05□□□□□ -0.32
SWT21YNL187W TY1B-JR1P47098 1755 aa13.05□□□□□ -0.32
SWT21YNL187W TY1B-ML2Q03434 1755 aaKnown RBP13.05□□□□□ -0.32
SWT21YNL187W TY1B-ER1Q03612 1755 aa13.05□□□□□ -0.32
SWT21YNL187W TY1B-ML1Q04711 1755 aaKnown RBP13.05□□□□□ -0.32
SWT21YNL187W TY1B-GR2Q12269 1755 aa13.05□□□□□ -0.32
SWT21YNL187W TY1B-OLQ12273 1755 aa13.05□□□□□ -0.32
SWT21YNL187W TY1B-PLQ12414 1755 aaKnown RBP13.05□□□□□ -0.32
SWT21YNL187W CDC25P04821 1589 aa13.05□□□□□ -0.32
SWT21YNL187W SAS10Q12136 610 aaPredicted RBP13□□□□□ -0.33
SWT21YNL187W PRY3P47033 881 aa12.97□□□□□ -0.33
SWT21YNL187W SPP41P38904 1435 aa12.96□□□□□ -0.33
SWT21YNL187W ESC1Q03661 1658 aaKnown RBP12.96□□□□□ -0.34
SWT21YNL187W PAN1P32521 1480 aa12.94□□□□□ -0.34
SWT21YNL187W SNQ2P32568 1501 aaKnown RBP12.92□□□□□ -0.34
SWT21YNL187W VTH1P40438 1549 aa12.88□□□□□ -0.35
SWT21YNL187W VTH2P40890 1549 aa12.88□□□□□ -0.35
SWT21YNL187W MLP2P40457 1679 aa12.86□□□□□ -0.35
SWT21YNL187W DNF1P32660 1571 aa12.86□□□□□ -0.35
SWT21YNL187W TSC11P40061 1430 aa12.86□□□□□ -0.35
SWT21YNL187W STH1P32597 1359 aa12.85□□□□□ -0.35
SWT21YNL187W RPA190P10964 1664 aaKnown RBP12.83□□□□□ -0.35
SWT21YNL187W TY1B-JR2P47100 1755 aaKnown RBP12.83□□□□□ -0.36
SWT21YNL187W TY1B-ER2Q03619 1755 aa12.83□□□□□ -0.36
SWT21YNL187W TY1B-MR1Q04214 1755 aa12.83□□□□□ -0.36
SWT21YNL187W TY1B-MR2Q04670 1755 aaKnown RBP12.83□□□□□ -0.36
SWT21YNL187W TY1B-LR1Q12088 1755 aaKnown RBP12.83□□□□□ -0.36
SWT21YNL187W TY1B-NL1Q12112 1755 aa12.83□□□□□ -0.36
SWT21YNL187W TY1B-GR1Q12141 1755 aa12.83□□□□□ -0.36
SWT21YNL187W TY1B-BLQ12490 1755 aa12.83□□□□□ -0.36
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms