RNA–Protein interactions for RNA: YNL097C

PHO23, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene PHO23, Length 993 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO23YNL097C SGS1P35187 1447 aa16.74■□□□□ 0.27
PHO23YNL097C INO80P53115 1489 aa16.48■□□□□ 0.23
PHO23YNL097C MON2P48563 1636 aaPredicted RBP16.47■□□□□ 0.23
PHO23YNL097C TCB3Q03640 1545 aaKnown RBP16.41■□□□□ 0.22
PHO23YNL097C TY1B-DR4Q07793 1604 aa16.27■□□□□ 0.2
PHO23YNL097C SWR1Q05471 1514 aa16.04■□□□□ 0.16
PHO23YNL097C HSL1P34244 1518 aa15.9■□□□□ 0.14
PHO23YNL097C SPT6P23615 1451 aaKnown RBP15.87■□□□□ 0.13
PHO23YNL097C SSN2P38931 1420 aa15.84■□□□□ 0.13
PHO23YNL097C SPA2P23201 1466 aaKnown RBP15.82■□□□□ 0.12
PHO23YNL097C DNA2P38859 1522 aa15.7■□□□□ 0.1
PHO23YNL097C KOG1P38873 1557 aa15.62■□□□□ 0.09
PHO23YNL097C HIR3P47171 1648 aa15.61■□□□□ 0.09
PHO23YNL097C XRN1P22147 1528 aaKnown RBP15.47■□□□□ 0.07
PHO23YNL097C DRS1P32892 752 aaKnown RBP15.4■□□□□ 0.06
PHO23YNL097C REV3P14284 1504 aa15.24■□□□□ 0.03
PHO23YNL097C THO2P53552 1597 aaKnown RBP15.19■□□□□ 0.02
PHO23YNL097C BUD4P47136 1447 aa15.17■□□□□ 0.02
PHO23YNL097C ECM5Q03214 1411 aa15.15■□□□□ 0.02
PHO23YNL097C TAF2P23255 1407 aa15.09■□□□□ 0.01
PHO23YNL097C SIN3P22579 1536 aa15.08■□□□□ 0.01
PHO23YNL097C SSK2P53599 1579 aa15.01□□□□□ -0.01
PHO23YNL097C ATG2P53855 1592 aa14.97□□□□□ -0.01
PHO23YNL097C MDS3P53094 1487 aa14.94□□□□□ -0.02
PHO23YNL097C ESP1Q03018 1630 aa14.93□□□□□ -0.02
PHO23YNL097C SKI3P17883 1432 aaKnown RBP14.89□□□□□ -0.03
PHO23YNL097C PEP1P32319 1579 aa14.86□□□□□ -0.03
PHO23YNL097C MYO2P19524 1574 aaKnown RBP14.83□□□□□ -0.04
PHO23YNL097C MTC1P47018 478 aaKnown RBP14.71□□□□□ -0.05
PHO23YNL097C RSE1Q04693 1361 aaKnown RBP14.7□□□□□ -0.06
PHO23YNL097C YPK9Q12697 1472 aa14.64□□□□□ -0.07
PHO23YNL097C SCC2Q04002 1493 aa14.57□□□□□ -0.08
PHO23YNL097C BPT1P14772 1559 aa14.52□□□□□ -0.08
PHO23YNL097C UFD4P33202 1483 aa14.52□□□□□ -0.08
PHO23YNL097C POL1P13382 1468 aa14.48□□□□□ -0.09
PHO23YNL097C RPO31P04051 1460 aa14.46□□□□□ -0.09
PHO23YNL097C RKR1Q04781 1562 aa14.45□□□□□ -0.1
PHO23YNL097C STU1P38198 1513 aa14.45□□□□□ -0.1
PHO23YNL097C TY2B-LR1P0C2J3 1770 aa14.4□□□□□ -0.1
PHO23YNL097C TY2B-FP0CX63 1770 aa14.4□□□□□ -0.1
PHO23YNL097C TY2B-GR2P0CX64 1770 aa14.4□□□□□ -0.1
PHO23YNL097C TY2B-CP25384 1770 aa14.4□□□□□ -0.1
PHO23YNL097C TY2B-DR2Q03494 1770 aa14.4□□□□□ -0.1
PHO23YNL097C TY1B-DR1Q03855 1755 aa14.4□□□□□ -0.1
PHO23YNL097C TY2B-DR3Q07791 1770 aaKnown RBP14.4□□□□□ -0.1
PHO23YNL097C TY2B-OR1Q12113 1770 aa14.4□□□□□ -0.1
PHO23YNL097C TY2B-DR1Q12472 1770 aa14.4□□□□□ -0.1
PHO23YNL097C TY2B-OR2Q12501 1770 aa14.4□□□□□ -0.1
PHO23YNL097C YCF1P39109 1515 aaKnown RBP14.37□□□□□ -0.11
PHO23YNL097C TOP2P06786 1428 aaKnown RBP14.34□□□□□ -0.11
PHO23YNL097C YOR1P53049 1477 aa14.31□□□□□ -0.12
PHO23YNL097C TY1B-DR3Q99231 1755 aa14.29□□□□□ -0.12
PHO23YNL097C RQC2Q12532 1038 aaKnown RBP14.28□□□□□ -0.12
PHO23YNL097C TY2B-BQ12491 1770 aa14.27□□□□□ -0.13
PHO23YNL097C SMC4Q12267 1418 aa14.24□□□□□ -0.13
PHO23YNL097C TY1B-BRQ12193 1756 aa14.23□□□□□ -0.13
PHO23YNL097C TY1B-GR3Q12316 1755 aa14.23□□□□□ -0.13
PHO23YNL097C TY1B-ORQ92393 1755 aa14.23□□□□□ -0.13
PHO23YNL097C YTA7P40340 1379 aa14.22□□□□□ -0.13
PHO23YNL097C CDC25P04821 1589 aa14.19□□□□□ -0.14
PHO23YNL097C TY1B-HO13535 1793 aa14.18□□□□□ -0.14
PHO23YNL097C TY1B-DR5P0C2I2 1755 aa14.18□□□□□ -0.14
PHO23YNL097C TY1B-DR6P0C2I3 1755 aa14.18□□□□□ -0.14
PHO23YNL097C TY1B-LR2P0C2I5 1755 aa14.18□□□□□ -0.14
PHO23YNL097C TY1B-LR3P0C2I6 1755 aaKnown RBP14.18□□□□□ -0.14
PHO23YNL097C TY1B-PR1P0C2I9 1755 aaKnown RBP14.18□□□□□ -0.14
PHO23YNL097C TY1B-PR2P0C2J0 1756 aa14.18□□□□□ -0.14
PHO23YNL097C TY1B-PR3P0C2J1 1755 aaKnown RBP14.18□□□□□ -0.14
PHO23YNL097C TY1B-JR1P47098 1755 aa14.18□□□□□ -0.14
PHO23YNL097C TY1B-ML2Q03434 1755 aaKnown RBP14.18□□□□□ -0.14
PHO23YNL097C TY1B-ER1Q03612 1755 aa14.18□□□□□ -0.14
PHO23YNL097C TY1B-ML1Q04711 1755 aaKnown RBP14.18□□□□□ -0.14
PHO23YNL097C TY1B-GR2Q12269 1755 aa14.18□□□□□ -0.14
PHO23YNL097C TY1B-OLQ12273 1755 aa14.18□□□□□ -0.14
PHO23YNL097C TY1B-PLQ12414 1755 aaKnown RBP14.18□□□□□ -0.14
PHO23YNL097C CHD1P32657 1468 aa14.15□□□□□ -0.14
PHO23YNL097C ESC1Q03661 1658 aaKnown RBP14.14□□□□□ -0.15
PHO23YNL097C MYO4P32492 1471 aa14.12□□□□□ -0.15
PHO23YNL097C MMS22Q06164 1454 aa14.11□□□□□ -0.15
PHO23YNL097C PAN1P32521 1480 aa14.07□□□□□ -0.16
PHO23YNL097C SAS10Q12136 610 aaPredicted RBP14.06□□□□□ -0.16
PHO23YNL097C SPP41P38904 1435 aa14.06□□□□□ -0.16
PHO23YNL097C RPA190P10964 1664 aaKnown RBP13.97□□□□□ -0.17
PHO23YNL097C DNF1P32660 1571 aa13.96□□□□□ -0.17
PHO23YNL097C VTH1P40438 1549 aa13.95□□□□□ -0.18
PHO23YNL097C VTH2P40890 1549 aa13.95□□□□□ -0.18
PHO23YNL097C SNQ2P32568 1501 aaKnown RBP13.95□□□□□ -0.18
PHO23YNL097C MLP2P40457 1679 aa13.94□□□□□ -0.18
PHO23YNL097C TY1B-JR2P47100 1755 aaKnown RBP13.94□□□□□ -0.18
PHO23YNL097C TY1B-ER2Q03619 1755 aa13.94□□□□□ -0.18
PHO23YNL097C TY1B-MR1Q04214 1755 aa13.94□□□□□ -0.18
PHO23YNL097C TY1B-MR2Q04670 1755 aaKnown RBP13.94□□□□□ -0.18
PHO23YNL097C TY1B-LR1Q12088 1755 aaKnown RBP13.94□□□□□ -0.18
PHO23YNL097C TY1B-NL1Q12112 1755 aa13.94□□□□□ -0.18
PHO23YNL097C TY1B-GR1Q12141 1755 aa13.94□□□□□ -0.18
PHO23YNL097C TY1B-BLQ12490 1755 aa13.94□□□□□ -0.18
PHO23YNL097C TSC11P40061 1430 aa13.93□□□□□ -0.18
PHO23YNL097C TRM732Q03496 1420 aa13.93□□□□□ -0.18
PHO23YNL097C STH1P32597 1359 aa13.92□□□□□ -0.18
PHO23YNL097C NTE1Q04958 1679 aa13.85□□□□□ -0.19
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms