RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W MON2P48563 1636 aaPredicted RBP17.01■□□□□ 0.31
PRE5YMR314W INO80P53115 1489 aa16.92■□□□□ 0.3
PRE5YMR314W DNA2P38859 1522 aa16.13■□□□□ 0.17
PRE5YMR314W SWR1Q05471 1514 aa16.03■□□□□ 0.16
PRE5YMR314W KOG1P38873 1557 aa15.91■□□□□ 0.14
PRE5YMR314W TY1B-DR4Q07793 1604 aa15.77■□□□□ 0.12
PRE5YMR314W TCB3Q03640 1545 aaKnown RBP15.75■□□□□ 0.11
PRE5YMR314W RSE1Q04693 1361 aaKnown RBP15.68■□□□□ 0.1
PRE5YMR314W SGS1P35187 1447 aa15.2■□□□□ 0.02
PRE5YMR314W HSL1P34244 1518 aa15.12■□□□□ 0.01
PRE5YMR314W SPT6P23615 1451 aaKnown RBP15.09■□□□□ 0.01
PRE5YMR314W SPA2P23201 1466 aaKnown RBP14.98□□□□□ -0.01
PRE5YMR314W ECM5Q03214 1411 aa14.88□□□□□ -0.03
PRE5YMR314W THO2P53552 1597 aaKnown RBP14.8□□□□□ -0.04
PRE5YMR314W HIR3P47171 1648 aa14.77□□□□□ -0.05
PRE5YMR314W BUD4P47136 1447 aa14.76□□□□□ -0.05
PRE5YMR314W MTC1P47018 478 aaKnown RBP14.71□□□□□ -0.05
PRE5YMR314W MDS3P53094 1487 aa14.66□□□□□ -0.06
PRE5YMR314W PEP1P32319 1579 aa14.49□□□□□ -0.09
PRE5YMR314W REV3P14284 1504 aa14.48□□□□□ -0.09
PRE5YMR314W XRN1P22147 1528 aaKnown RBP14.4□□□□□ -0.1
PRE5YMR314W ATG2P53855 1592 aa14.33□□□□□ -0.12
PRE5YMR314W BPT1P14772 1559 aa14.31□□□□□ -0.12
PRE5YMR314W SSK2P53599 1579 aa14.07□□□□□ -0.16
PRE5YMR314W YCF1P39109 1515 aaKnown RBP14.06□□□□□ -0.16
PRE5YMR314W SIN3P22579 1536 aa13.98□□□□□ -0.17
PRE5YMR314W SKI3P17883 1432 aaKnown RBP13.97□□□□□ -0.17
PRE5YMR314W TAF2P23255 1407 aa13.89□□□□□ -0.19
PRE5YMR314W MIF2P35201 549 aa13.83□□□□□ -0.2
PRE5YMR314W SSN2P38931 1420 aa13.82□□□□□ -0.2
PRE5YMR314W ESP1Q03018 1630 aa13.8□□□□□ -0.2
PRE5YMR314W UFD4P33202 1483 aa13.78□□□□□ -0.2
PRE5YMR314W MET5P47169 1442 aa13.71□□□□□ -0.22
PRE5YMR314W MYO2P19524 1574 aaKnown RBP13.71□□□□□ -0.22
PRE5YMR314W ESC1Q03661 1658 aaKnown RBP13.66□□□□□ -0.22
PRE5YMR314W CDC25P04821 1589 aa13.65□□□□□ -0.22
PRE5YMR314W SCC2Q04002 1493 aa13.64□□□□□ -0.23
PRE5YMR314W LTE1P07866 1435 aa13.63□□□□□ -0.23
PRE5YMR314W YPK9Q12697 1472 aa13.62□□□□□ -0.23
PRE5YMR314W DNF1P32660 1571 aa13.62□□□□□ -0.23
PRE5YMR314W CHD1P32657 1468 aa13.61□□□□□ -0.23
PRE5YMR314W TY2B-LR1P0C2J3 1770 aa13.57□□□□□ -0.24
PRE5YMR314W TY2B-FP0CX63 1770 aa13.57□□□□□ -0.24
PRE5YMR314W TY2B-GR2P0CX64 1770 aa13.57□□□□□ -0.24
PRE5YMR314W TY2B-CP25384 1770 aa13.57□□□□□ -0.24
PRE5YMR314W TY2B-DR2Q03494 1770 aa13.57□□□□□ -0.24
PRE5YMR314W TY1B-DR1Q03855 1755 aa13.57□□□□□ -0.24
PRE5YMR314W TY2B-DR3Q07791 1770 aaKnown RBP13.57□□□□□ -0.24
PRE5YMR314W TY2B-OR1Q12113 1770 aa13.57□□□□□ -0.24
PRE5YMR314W TY2B-DR1Q12472 1770 aa13.57□□□□□ -0.24
PRE5YMR314W TY2B-OR2Q12501 1770 aa13.57□□□□□ -0.24
PRE5YMR314W BNI1P41832 1953 aa13.56□□□□□ -0.24
PRE5YMR314W RPA190P10964 1664 aaKnown RBP13.56□□□□□ -0.24
PRE5YMR314W TY1B-BRQ12193 1756 aa13.55□□□□□ -0.24
PRE5YMR314W TY1B-GR3Q12316 1755 aa13.55□□□□□ -0.24
PRE5YMR314W TY1B-ORQ92393 1755 aa13.55□□□□□ -0.24
PRE5YMR314W RPO31P04051 1460 aa13.55□□□□□ -0.24
PRE5YMR314W RKR1Q04781 1562 aa13.54□□□□□ -0.24
PRE5YMR314W PAN1P32521 1480 aa13.47□□□□□ -0.25
PRE5YMR314W GEA2P39993 1459 aaKnown RBP13.43□□□□□ -0.26
PRE5YMR314W TY1B-HO13535 1793 aa13.39□□□□□ -0.27
PRE5YMR314W TY1B-DR5P0C2I2 1755 aa13.39□□□□□ -0.27
PRE5YMR314W TY1B-DR6P0C2I3 1755 aa13.39□□□□□ -0.27
PRE5YMR314W TY1B-LR2P0C2I5 1755 aa13.39□□□□□ -0.27
PRE5YMR314W TY1B-LR3P0C2I6 1755 aaKnown RBP13.39□□□□□ -0.27
PRE5YMR314W TY1B-PR1P0C2I9 1755 aaKnown RBP13.39□□□□□ -0.27
PRE5YMR314W TY1B-PR2P0C2J0 1756 aa13.39□□□□□ -0.27
PRE5YMR314W TY1B-PR3P0C2J1 1755 aaKnown RBP13.39□□□□□ -0.27
PRE5YMR314W TY1B-JR1P47098 1755 aa13.39□□□□□ -0.27
PRE5YMR314W TY1B-ML2Q03434 1755 aaKnown RBP13.39□□□□□ -0.27
PRE5YMR314W TY1B-ER1Q03612 1755 aa13.39□□□□□ -0.27
PRE5YMR314W TY1B-ML1Q04711 1755 aaKnown RBP13.39□□□□□ -0.27
PRE5YMR314W TY1B-GR2Q12269 1755 aa13.39□□□□□ -0.27
PRE5YMR314W TY1B-OLQ12273 1755 aa13.39□□□□□ -0.27
PRE5YMR314W TY1B-PLQ12414 1755 aaKnown RBP13.39□□□□□ -0.27
PRE5YMR314W TY2B-BQ12491 1770 aa13.38□□□□□ -0.27
PRE5YMR314W RQC2Q12532 1038 aaKnown RBP13.38□□□□□ -0.27
PRE5YMR314W ITT1Q04638 464 aa13.34□□□□□ -0.27
PRE5YMR314W YFR006WP43590 535 aa13.33□□□□□ -0.28
PRE5YMR314W TY1B-DR3Q99231 1755 aa13.3□□□□□ -0.28
PRE5YMR314W ABP1P15891 592 aaKnown RBP13.3□□□□□ -0.28
PRE5YMR314W DRS1P32892 752 aaKnown RBP13.29□□□□□ -0.28
PRE5YMR314W TOP2P06786 1428 aaKnown RBP13.29□□□□□ -0.28
PRE5YMR314W MMS1Q06211 1407 aa13.25□□□□□ -0.29
PRE5YMR314W MMS22Q06164 1454 aa13.24□□□□□ -0.29
PRE5YMR314W YRF1-1P0CX20 1796 aa13.23□□□□□ -0.29
PRE5YMR314W YRF1-5P0CX21 1796 aa13.23□□□□□ -0.29
PRE5YMR314W YRF1-8P0CX22 1796 aa13.23□□□□□ -0.29
PRE5YMR314W TRM732Q03496 1420 aa13.22□□□□□ -0.29
PRE5YMR314W IRC20Q06554 1556 aa13.22□□□□□ -0.29
PRE5YMR314W DRS2P39524 1355 aa13.16□□□□□ -0.3
PRE5YMR314W VPS15P22219 1454 aa13.14□□□□□ -0.31
PRE5YMR314W NUP159P40477 1460 aa13.12□□□□□ -0.31
PRE5YMR314W TY1B-JR2P47100 1755 aaKnown RBP13.09□□□□□ -0.31
PRE5YMR314W TY1B-ER2Q03619 1755 aa13.09□□□□□ -0.31
PRE5YMR314W TY1B-MR1Q04214 1755 aa13.09□□□□□ -0.31
PRE5YMR314W TY1B-MR2Q04670 1755 aaKnown RBP13.09□□□□□ -0.31
PRE5YMR314W TY1B-LR1Q12088 1755 aaKnown RBP13.09□□□□□ -0.31
PRE5YMR314W TY1B-NL1Q12112 1755 aa13.09□□□□□ -0.31
PRE5YMR314W TY1B-GR1Q12141 1755 aa13.09□□□□□ -0.31
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms