RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C INO80P53115 1489 aa12.57□□□□□ -0.4
SCS7YMR272C MON2P48563 1636 aaPredicted RBP12.45□□□□□ -0.42
SCS7YMR272C TCB3Q03640 1545 aaKnown RBP12.06□□□□□ -0.48
SCS7YMR272C SGS1P35187 1447 aa11.93□□□□□ -0.5
SCS7YMR272C SWR1Q05471 1514 aa11.91□□□□□ -0.5
SCS7YMR272C DNA2P38859 1522 aa11.86□□□□□ -0.51
SCS7YMR272C KOG1P38873 1557 aa11.86□□□□□ -0.51
SCS7YMR272C TY1B-DR4Q07793 1604 aa11.86□□□□□ -0.51
SCS7YMR272C SPA2P23201 1466 aaKnown RBP11.57□□□□□ -0.56
SCS7YMR272C SPT6P23615 1451 aaKnown RBP11.54□□□□□ -0.56
SCS7YMR272C RSE1Q04693 1361 aaKnown RBP11.54□□□□□ -0.56
SCS7YMR272C HSL1P34244 1518 aa11.49□□□□□ -0.57
SCS7YMR272C HIR3P47171 1648 aa11.26□□□□□ -0.61
SCS7YMR272C ECM5Q03214 1411 aa11.25□□□□□ -0.61
SCS7YMR272C THO2P53552 1597 aaKnown RBP11.23□□□□□ -0.61
SCS7YMR272C BUD4P47136 1447 aa11.22□□□□□ -0.61
SCS7YMR272C MTC1P47018 478 aaKnown RBP11.14□□□□□ -0.63
SCS7YMR272C XRN1P22147 1528 aaKnown RBP11.12□□□□□ -0.63
SCS7YMR272C MDS3P53094 1487 aa11.01□□□□□ -0.65
SCS7YMR272C SSN2P38931 1420 aa10.99□□□□□ -0.65
SCS7YMR272C REV3P14284 1504 aa10.89□□□□□ -0.67
SCS7YMR272C DRS1P32892 752 aaKnown RBP10.86□□□□□ -0.67
SCS7YMR272C PEP1P32319 1579 aa10.86□□□□□ -0.67
SCS7YMR272C ATG2P53855 1592 aa10.84□□□□□ -0.67
SCS7YMR272C SKI3P17883 1432 aaKnown RBP10.82□□□□□ -0.68
SCS7YMR272C BPT1P14772 1559 aa10.82□□□□□ -0.68
SCS7YMR272C SIN3P22579 1536 aa10.79□□□□□ -0.68
SCS7YMR272C TAF2P23255 1407 aa10.78□□□□□ -0.68
SCS7YMR272C SSK2P53599 1579 aa10.73□□□□□ -0.69
SCS7YMR272C ESP1Q03018 1630 aa10.67□□□□□ -0.7
SCS7YMR272C MYO2P19524 1574 aaKnown RBP10.65□□□□□ -0.71
SCS7YMR272C YCF1P39109 1515 aaKnown RBP10.6□□□□□ -0.71
SCS7YMR272C UFD4P33202 1483 aa10.57□□□□□ -0.72
SCS7YMR272C YPK9Q12697 1472 aa10.54□□□□□ -0.72
SCS7YMR272C RQC2Q12532 1038 aaKnown RBP10.51□□□□□ -0.73
SCS7YMR272C SCC2Q04002 1493 aa10.48□□□□□ -0.73
SCS7YMR272C RPO31P04051 1460 aa10.43□□□□□ -0.74
SCS7YMR272C CHD1P32657 1468 aa10.38□□□□□ -0.75
SCS7YMR272C MET5P47169 1442 aa10.38□□□□□ -0.75
SCS7YMR272C CDC25P04821 1589 aa10.38□□□□□ -0.75
SCS7YMR272C ESC1Q03661 1658 aaKnown RBP10.37□□□□□ -0.75
SCS7YMR272C TOP2P06786 1428 aaKnown RBP10.34□□□□□ -0.75
SCS7YMR272C PAN1P32521 1480 aa10.32□□□□□ -0.76
SCS7YMR272C TY2B-LR1P0C2J3 1770 aa10.3□□□□□ -0.76
SCS7YMR272C TY2B-FP0CX63 1770 aa10.3□□□□□ -0.76
SCS7YMR272C TY2B-GR2P0CX64 1770 aa10.3□□□□□ -0.76
SCS7YMR272C TY2B-CP25384 1770 aa10.3□□□□□ -0.76
SCS7YMR272C TY2B-DR2Q03494 1770 aa10.3□□□□□ -0.76
SCS7YMR272C TY1B-DR1Q03855 1755 aa10.3□□□□□ -0.76
SCS7YMR272C TY2B-DR3Q07791 1770 aaKnown RBP10.3□□□□□ -0.76
SCS7YMR272C TY2B-OR1Q12113 1770 aa10.3□□□□□ -0.76
SCS7YMR272C TY2B-DR1Q12472 1770 aa10.3□□□□□ -0.76
SCS7YMR272C TY2B-OR2Q12501 1770 aa10.3□□□□□ -0.76
SCS7YMR272C RKR1Q04781 1562 aa10.28□□□□□ -0.76
SCS7YMR272C LTE1P07866 1435 aa10.27□□□□□ -0.77
SCS7YMR272C TRM732Q03496 1420 aa10.24□□□□□ -0.77
SCS7YMR272C POL1P13382 1468 aa10.24□□□□□ -0.77
SCS7YMR272C MMS22Q06164 1454 aa10.24□□□□□ -0.77
SCS7YMR272C TY1B-BRQ12193 1756 aa10.24□□□□□ -0.77
SCS7YMR272C TY1B-GR3Q12316 1755 aa10.24□□□□□ -0.77
SCS7YMR272C TY1B-ORQ92393 1755 aa10.24□□□□□ -0.77
SCS7YMR272C SMC4Q12267 1418 aa10.21□□□□□ -0.78
SCS7YMR272C DNF1P32660 1571 aa10.19□□□□□ -0.78
SCS7YMR272C TY2B-BQ12491 1770 aa10.19□□□□□ -0.78
SCS7YMR272C RPA190P10964 1664 aaKnown RBP10.18□□□□□ -0.78
SCS7YMR272C TY1B-HO13535 1793 aa10.18□□□□□ -0.78
SCS7YMR272C TY1B-DR5P0C2I2 1755 aa10.18□□□□□ -0.78
SCS7YMR272C TY1B-DR6P0C2I3 1755 aa10.18□□□□□ -0.78
SCS7YMR272C TY1B-LR2P0C2I5 1755 aa10.18□□□□□ -0.78
SCS7YMR272C TY1B-LR3P0C2I6 1755 aaKnown RBP10.18□□□□□ -0.78
SCS7YMR272C TY1B-PR1P0C2I9 1755 aaKnown RBP10.18□□□□□ -0.78
SCS7YMR272C TY1B-PR2P0C2J0 1756 aa10.18□□□□□ -0.78
SCS7YMR272C TY1B-PR3P0C2J1 1755 aaKnown RBP10.18□□□□□ -0.78
SCS7YMR272C TY1B-JR1P47098 1755 aa10.18□□□□□ -0.78
SCS7YMR272C TY1B-ML2Q03434 1755 aaKnown RBP10.18□□□□□ -0.78
SCS7YMR272C TY1B-ER1Q03612 1755 aa10.18□□□□□ -0.78
SCS7YMR272C TY1B-ML1Q04711 1755 aaKnown RBP10.18□□□□□ -0.78
SCS7YMR272C TY1B-GR2Q12269 1755 aa10.18□□□□□ -0.78
SCS7YMR272C TY1B-OLQ12273 1755 aa10.18□□□□□ -0.78
SCS7YMR272C TY1B-PLQ12414 1755 aaKnown RBP10.18□□□□□ -0.78
SCS7YMR272C GEA2P39993 1459 aaKnown RBP10.17□□□□□ -0.78
SCS7YMR272C YOR1P53049 1477 aa10.17□□□□□ -0.78
SCS7YMR272C STU1P38198 1513 aa10.16□□□□□ -0.78
SCS7YMR272C TY1B-DR3Q99231 1755 aa10.16□□□□□ -0.78
SCS7YMR272C MIF2P35201 549 aa10.15□□□□□ -0.78
SCS7YMR272C SPP41P38904 1435 aa10.13□□□□□ -0.79
SCS7YMR272C YTA7P40340 1379 aa10.12□□□□□ -0.79
SCS7YMR272C NUP159P40477 1460 aa10.06□□□□□ -0.8
SCS7YMR272C TSC11P40061 1430 aa10.06□□□□□ -0.8
SCS7YMR272C STH1P32597 1359 aa10.05□□□□□ -0.8
SCS7YMR272C DRS2P39524 1355 aa10.05□□□□□ -0.8
SCS7YMR272C ABP1P15891 592 aaKnown RBP10.04□□□□□ -0.8
SCS7YMR272C MYO4P32492 1471 aa10.04□□□□□ -0.8
SCS7YMR272C VTH1P40438 1549 aa10.02□□□□□ -0.8
SCS7YMR272C VTH2P40890 1549 aa10.02□□□□□ -0.8
SCS7YMR272C RTT106P40161 455 aa10.02□□□□□ -0.81
SCS7YMR272C ITT1Q04638 464 aa10.02□□□□□ -0.81
SCS7YMR272C VPS15P22219 1454 aa10.01□□□□□ -0.81
SCS7YMR272C NTE1Q04958 1679 aa10.01□□□□□ -0.81
SCS7YMR272C TY1B-JR2P47100 1755 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 154.3 ms