RNA–Protein interactions for RNA: YMR138W

CIN4, Transcript of GTP-binding protein involved in beta-tubulin (Tub2p) folding, yeastyeast

Gene CIN4, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIN4YMR138W MON2P48563 1636 aaPredicted RBP11.52□□□□□ -0.57
CIN4YMR138W INO80P53115 1489 aa11.4□□□□□ -0.58
CIN4YMR138W SGS1P35187 1447 aa11.38□□□□□ -0.59
CIN4YMR138W TCB3Q03640 1545 aaKnown RBP11.31□□□□□ -0.6
CIN4YMR138W TY1B-DR4Q07793 1604 aa11.21□□□□□ -0.61
CIN4YMR138W SWR1Q05471 1514 aa11.11□□□□□ -0.63
CIN4YMR138W DNA2P38859 1522 aa10.91□□□□□ -0.66
CIN4YMR138W HSL1P34244 1518 aa10.9□□□□□ -0.66
CIN4YMR138W SPT6P23615 1451 aaKnown RBP10.86□□□□□ -0.67
CIN4YMR138W KOG1P38873 1557 aa10.83□□□□□ -0.68
CIN4YMR138W SPA2P23201 1466 aaKnown RBP10.71□□□□□ -0.69
CIN4YMR138W SSN2P38931 1420 aa10.7□□□□□ -0.7
CIN4YMR138W HIR3P47171 1648 aa10.67□□□□□ -0.7
CIN4YMR138W XRN1P22147 1528 aaKnown RBP10.5□□□□□ -0.73
CIN4YMR138W THO2P53552 1597 aaKnown RBP10.48□□□□□ -0.73
CIN4YMR138W BUD4P47136 1447 aa10.44□□□□□ -0.74
CIN4YMR138W ECM5Q03214 1411 aa10.43□□□□□ -0.74
CIN4YMR138W REV3P14284 1504 aa10.36□□□□□ -0.75
CIN4YMR138W SIN3P22579 1536 aa10.34□□□□□ -0.75
CIN4YMR138W MDS3P53094 1487 aa10.3□□□□□ -0.76
CIN4YMR138W PEP1P32319 1579 aa10.29□□□□□ -0.76
CIN4YMR138W ATG2P53855 1592 aa10.26□□□□□ -0.77
CIN4YMR138W DRS1P32892 752 aaKnown RBP10.26□□□□□ -0.77
CIN4YMR138W SSK2P53599 1579 aa10.22□□□□□ -0.77
CIN4YMR138W RSE1Q04693 1361 aaKnown RBP10.19□□□□□ -0.78
CIN4YMR138W TAF2P23255 1407 aa10.11□□□□□ -0.79
CIN4YMR138W ESP1Q03018 1630 aa10.1□□□□□ -0.79
CIN4YMR138W SKI3P17883 1432 aaKnown RBP10.06□□□□□ -0.8
CIN4YMR138W YPK9Q12697 1472 aa10.04□□□□□ -0.8
CIN4YMR138W MYO2P19524 1574 aaKnown RBP10.02□□□□□ -0.81
CIN4YMR138W SCC2Q04002 1493 aa9.97□□□□□ -0.81
CIN4YMR138W RPO31P04051 1460 aa9.95□□□□□ -0.82
CIN4YMR138W BPT1P14772 1559 aa9.95□□□□□ -0.82
CIN4YMR138W UFD4P33202 1483 aa9.91□□□□□ -0.82
CIN4YMR138W POL1P13382 1468 aa9.85□□□□□ -0.83
CIN4YMR138W YCF1P39109 1515 aaKnown RBP9.84□□□□□ -0.83
CIN4YMR138W TOP2P06786 1428 aaKnown RBP9.81□□□□□ -0.84
CIN4YMR138W TY2B-LR1P0C2J3 1770 aa9.75□□□□□ -0.85
CIN4YMR138W TY2B-FP0CX63 1770 aa9.75□□□□□ -0.85
CIN4YMR138W TY2B-GR2P0CX64 1770 aa9.75□□□□□ -0.85
CIN4YMR138W TY2B-CP25384 1770 aa9.75□□□□□ -0.85
CIN4YMR138W TY2B-DR2Q03494 1770 aa9.75□□□□□ -0.85
CIN4YMR138W TY1B-DR1Q03855 1755 aa9.75□□□□□ -0.85
CIN4YMR138W TY2B-DR3Q07791 1770 aaKnown RBP9.75□□□□□ -0.85
CIN4YMR138W TY2B-OR1Q12113 1770 aa9.75□□□□□ -0.85
CIN4YMR138W TY2B-DR1Q12472 1770 aa9.75□□□□□ -0.85
CIN4YMR138W TY2B-OR2Q12501 1770 aa9.75□□□□□ -0.85
CIN4YMR138W RKR1Q04781 1562 aa9.74□□□□□ -0.85
CIN4YMR138W CHD1P32657 1468 aa9.73□□□□□ -0.85
CIN4YMR138W YOR1P53049 1477 aa9.73□□□□□ -0.85
CIN4YMR138W MTC1P47018 478 aaKnown RBP9.72□□□□□ -0.85
CIN4YMR138W SMC4Q12267 1418 aa9.72□□□□□ -0.85
CIN4YMR138W STU1P38198 1513 aa9.72□□□□□ -0.85
CIN4YMR138W CDC25P04821 1589 aa9.71□□□□□ -0.86
CIN4YMR138W TY1B-BRQ12193 1756 aa9.68□□□□□ -0.86
CIN4YMR138W TY1B-GR3Q12316 1755 aa9.68□□□□□ -0.86
CIN4YMR138W TY1B-ORQ92393 1755 aa9.68□□□□□ -0.86
CIN4YMR138W PAN1P32521 1480 aa9.66□□□□□ -0.86
CIN4YMR138W TY1B-DR3Q99231 1755 aa9.65□□□□□ -0.86
CIN4YMR138W TY2B-BQ12491 1770 aa9.65□□□□□ -0.87
CIN4YMR138W TY1B-HO13535 1793 aa9.63□□□□□ -0.87
CIN4YMR138W TY1B-DR5P0C2I2 1755 aa9.63□□□□□ -0.87
CIN4YMR138W TY1B-DR6P0C2I3 1755 aa9.63□□□□□ -0.87
CIN4YMR138W TY1B-LR2P0C2I5 1755 aa9.63□□□□□ -0.87
CIN4YMR138W TY1B-LR3P0C2I6 1755 aaKnown RBP9.63□□□□□ -0.87
CIN4YMR138W TY1B-PR1P0C2I9 1755 aaKnown RBP9.63□□□□□ -0.87
CIN4YMR138W TY1B-PR2P0C2J0 1756 aa9.63□□□□□ -0.87
CIN4YMR138W TY1B-PR3P0C2J1 1755 aaKnown RBP9.63□□□□□ -0.87
CIN4YMR138W TY1B-JR1P47098 1755 aa9.63□□□□□ -0.87
CIN4YMR138W TY1B-ML2Q03434 1755 aaKnown RBP9.63□□□□□ -0.87
CIN4YMR138W TY1B-ER1Q03612 1755 aa9.63□□□□□ -0.87
CIN4YMR138W TY1B-ML1Q04711 1755 aaKnown RBP9.63□□□□□ -0.87
CIN4YMR138W TY1B-GR2Q12269 1755 aa9.63□□□□□ -0.87
CIN4YMR138W TY1B-OLQ12273 1755 aa9.63□□□□□ -0.87
CIN4YMR138W TY1B-PLQ12414 1755 aaKnown RBP9.63□□□□□ -0.87
CIN4YMR138W DNF1P32660 1571 aa9.62□□□□□ -0.87
CIN4YMR138W MMS22Q06164 1454 aa9.61□□□□□ -0.87
CIN4YMR138W YTA7P40340 1379 aa9.61□□□□□ -0.87
CIN4YMR138W MYO4P32492 1471 aa9.59□□□□□ -0.87
CIN4YMR138W SPP41P38904 1435 aa9.56□□□□□ -0.88
CIN4YMR138W MET5P47169 1442 aa9.56□□□□□ -0.88
CIN4YMR138W RPA190P10964 1664 aaKnown RBP9.53□□□□□ -0.88
CIN4YMR138W ESC1Q03661 1658 aaKnown RBP9.52□□□□□ -0.89
CIN4YMR138W TSC11P40061 1430 aa9.52□□□□□ -0.89
CIN4YMR138W VTH1P40438 1549 aa9.49□□□□□ -0.89
CIN4YMR138W VTH2P40890 1549 aa9.49□□□□□ -0.89
CIN4YMR138W TRM732Q03496 1420 aa9.48□□□□□ -0.89
CIN4YMR138W RQC2Q12532 1038 aaKnown RBP9.46□□□□□ -0.9
CIN4YMR138W TY1B-JR2P47100 1755 aaKnown RBP9.44□□□□□ -0.9
CIN4YMR138W TY1B-ER2Q03619 1755 aa9.44□□□□□ -0.9
CIN4YMR138W TY1B-MR1Q04214 1755 aa9.44□□□□□ -0.9
CIN4YMR138W TY1B-MR2Q04670 1755 aaKnown RBP9.44□□□□□ -0.9
CIN4YMR138W TY1B-LR1Q12088 1755 aaKnown RBP9.44□□□□□ -0.9
CIN4YMR138W TY1B-NL1Q12112 1755 aa9.44□□□□□ -0.9
CIN4YMR138W TY1B-GR1Q12141 1755 aa9.44□□□□□ -0.9
CIN4YMR138W TY1B-BLQ12490 1755 aa9.44□□□□□ -0.9
CIN4YMR138W SNT2P53127 1403 aa9.41□□□□□ -0.9
CIN4YMR138W SNQ2P32568 1501 aaKnown RBP9.4□□□□□ -0.91
CIN4YMR138W NUP159P40477 1460 aa9.39□□□□□ -0.91
CIN4YMR138W NTE1Q04958 1679 aa9.39□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms